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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:secretory
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39766 Canola cytosol 98.91 98.98
CDY71471 Canola cytosol 32.36 98.14
CDY31978 Canola cytosol 87.29 83.48
AT2G20290.1 Thale cress endoplasmic reticulum 82.53 81.31
CDY05734 Canola cytosol 86.88 80.99
CDX91798 Canola cytosol 23.32 68.06
VIT_07s0005g04790.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 67.64 65.55
CDY72648 Canola cytosol 12.1 65.44
PGSC0003DMT400056647 Potato cytosol 67.3 65.39
KRH67505 Soybean cytosol 67.17 65.34
KRH19659 Soybean cytosol 67.44 65.31
KRH32270 Soybean cytosol 67.17 65.26
Solyc09g064200.2.1 Tomato plastid 67.03 65.13
KRG95788 Soybean cytosol 66.96 64.93
CDY32922 Canola cytosol 66.49 64.9
Solyc06g008090.2.1 Tomato cytosol 64.85 64.29
CDX94736 Canola cytosol 66.76 64.27
CDY64313 Canola cytosol 66.42 64.23
Os03t0860700-00 Rice cytosol, plasma membrane 38.75 64.12
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 66.69 63.7
CDY32531 Canola endoplasmic reticulum 65.4 63.67
CDY10075 Canola endoplasmic reticulum 65.47 63.56
OQU85951 Sorghum cytosol 64.31 62.2
TraesCS6B01G431400.1 Wheat cytosol 63.63 61.99
TraesCS6A01G390800.2 Wheat cytosol 63.63 61.99
TraesCS6D01G377100.1 Wheat cytosol 63.56 61.92
Zm00001d018481_P033 Maize cytosol 64.31 61.87
HORVU6Hr1G091010.24 Barley cytosol 63.49 61.81
Os02t0816900-01 Rice cytosol, plasma membrane 53.16 61.62
CDX68955 Canola cytosol 21.48 60.77
GSMUA_AchrUn_... Banana cytosol 62.34 59.55
KXG34975 Sorghum cytosol 58.06 59.22
EER90459 Sorghum cytosol 59.21 58.69
Zm00001d019495_P001 Maize cytosol 59.96 58.57
TraesCS1D01G174000.2 Wheat cytosol 59.96 58.45
HORVU1Hr1G044020.1 Barley cytosol 59.82 58.32
Zm00001d034927_P001 Maize cytosol 59.21 58.3
TraesCS1A01G166900.2 Wheat cytosol 59.82 58.28
TraesCS1B01G183200.1 Wheat cytosol 59.62 58.08
GSMUA_Achr3P27420_001 Banana cytosol 65.74 57.94
HORVU5Hr1G125430.15 Barley cytosol 57.24 57.2
TraesCS5D01G558600.1 Wheat cytosol 57.85 57.19
TraesCS5B01G566200.1 Wheat cytosol 57.78 57.16
TraesCS4A01G313500.1 Wheat cytosol 57.72 57.09
PGSC0003DMT400038143 Potato cytosol 32.56 56.22
CDY42350 Canola cytosol 57.17 55.95
CDX95235 Canola cytosol 58.19 55.73
CDY31130 Canola cytosol, mitochondrion 57.92 55.32
CDY66597 Canola cytosol 57.17 55.26
CDY65572 Canola plastid 71.38 55.23
CDX81833 Canola cytosol 54.79 55.02
CDY35211 Canola plastid 71.24 54.98
CDX70927 Canola cytosol 57.72 54.56
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 56.22 54.55
CDY45087 Canola cytosol 57.24 54.36
CDY51846 Canola cytosol 57.72 53.7
CDX84752 Canola cytosol 55.13 51.95
CDX79446 Canola cytosol 54.79 51.77
CDX86626 Canola cytosol 58.8 49.49
CDY15512 Canola cytosol 58.94 49.4
CDX88973 Canola cytosol 39.43 49.36
CDX79520 Canola endoplasmic reticulum 50.71 49.34
CDX84695 Canola cytosol 57.38 48.67
CDY19473 Canola cytosol 57.78 48.54
CDY00546 Canola cytosol 39.23 48.04
CDX93542 Canola cytosol 56.42 47.95
CDY46128 Canola cytosol 48.81 47.8
GSMUA_Achr1P03340_001 Banana cytosol 60.03 47.52
CDX72393 Canola cytosol 48.54 47.41
CDX95038 Canola cytosol 54.38 47.28
CDX67724 Canola cytosol 39.36 47.27
CDX98274 Canola nucleus 39.43 46.7
CDY17154 Canola cytosol 57.44 46.23
CDX75338 Canola cytosol 49.15 43.63
CDY69448 Canola extracellular, golgi, mitochondrion 8.7 38.79
CDX92461 Canola cytosol 11.56 36.72
CDY16536 Canola cytosol 11.15 36.53
CDY69853 Canola endoplasmic reticulum 11.35 34.58
CDY65579 Canola endoplasmic reticulum 25.9 33.75
CDY24591 Canola cytosol, plastid 26.24 33.3
CDY36068 Canola cytosol, mitochondrion 25.56 33.19
CDY42506 Canola cytosol, plastid 25.7 32.9
CDY29324 Canola cytosol 25.56 32.75
CDY22791 Canola cytosol, plastid 25.7 32.67
CDX82270 Canola cytosol 25.9 31.86
CDY28777 Canola cytosol 25.9 31.78
CDY52239 Canola cytosol 25.83 31.75
CDY53932 Canola cytosol, plastid 25.36 31.58
CDY18321 Canola cytosol 25.83 31.48
CDY14319 Canola cytosol, plastid 25.56 31.2
CDY25361 Canola cytosol 26.44 25.11
CDX72394 Canola nucleus 0.07 0.1
Protein Annotations
Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530Gene3D:2.30.30.360MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10GO:A0A078EMV6EnsemblPlants:CDY03315ProteinID:CDY03315ProteinID:CDY03315.1ncoils:Coil
InterPro:Dilute_domGO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777GO:GO:0003824
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005856GO:GO:0007015GO:GO:0007018GO:GO:0008017GO:GO:0008150GO:GO:0009987
GO:GO:0016043GO:GO:0016459GO:GO:0016787GO:GO:0051015EnsemblPlantsGene:GSBRNA2T00115901001InterPro:IPR000048
InterPro:IPR001609InterPro:IPR002710InterPro:IPR004009InterPro:IPR008989InterPro:IPR036961InterPro:IQ_motif_EF-hand-BS
InterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11InterPro:MyosinXI_CBDInterPro:Myosin_NInterPro:Myosin_S1_NInterPro:Myosin_head_motor_dom
InterPro:P-loop_NTPasePFAM:PF00063PFAM:PF00612PFAM:PF01843PFAM:PF02736PRINTS:PR00193
PFscan:PS50096PFscan:PS51126PFscan:PS51456PFscan:PS51844PANTHER:PTHR13140PANTHER:PTHR13140:SF256
SMART:SM00015SMART:SM00242SMART:SM01132SUPFAM:SSF52540SignalP:SignalP-noTMUniParc:UPI0004EF0F9C
SEG:seg:::::
Description
BnaC09g10330D
Coordinates
chrLK031942:+:608583..617085
Molecular Weight (calculated)
166594.0 Da
IEP (calculated)
7.854
GRAVY (calculated)
-0.341
Length
1471 amino acids
Sequence
(BLAST)
0001: MFFFLLLQPS STVKAGSFVW VKDPEEAWLD GEVIEVNGDD IKVQCTSGKT VAVKVSDTHP KDMEVPPSGV TDMTTLAYLH EPGVLQNLKS RYHIDEIYTY
0101: TGDILIAVNP FKQLANLYND HMIEHYKGAP FGSLMPHPFA VADAAYRQMI NEGVSQSILV SGESGAGKTE TAKTLMKYLA KMGGRAVKDL SARRSVEDQV
0201: LESNPVLEAF GNAKTVRNNN SSRFGKFVEI QFDQRGRISG AAIKTYLLER SRVCQVSDSE RNYHCFYMLC AAPSEDIKKL KLEDPTTYRY LNQSHCIKLE
0301: GMDDSKEYAK TREAMGIVGI SVEEQEAIFR VLAAILHLGN IEFTNGEETD SSVPKDNKSL KIAAELFMCD EQALEDSLCK RVMVTPEETI SRCLDPESAA
0401: FSRDALAKFV YARLFDWIVN KINNSIGQDP DSKHMIGVLD IYGFESFKTN SFEQFCINLT NEKLQHHFNE HVLKMEQDEY KKEEIAWNHI EFPDNREVLQ
0501: LIEKKPGGII ALLDEACMFP RSTHETFSQK LYETFKTNKH FSKPKLARTD FTVCHYAGDV TYQTQQFLEK NKDYVVAEHQ ALLGASRCTF IAGLFPSLVE
0601: DASKQTKFSS VASQFKQQLA LLMERLSTTE PRYIRCVKPN NLLKPSIFEN QNVLQQLRCG GMMEAIEICR AGYPTRKHFD EFLDRFSVLA SSTLDKCSDE
0701: KAACKKLLEA VGLKGYQIGK TKVLLMAGQM AELDARRTEV LGRAARIIQR KFRSYLLLKA AINMQAVCRG QLARHIFEDL RRKEAAALKI QRALRIYLER
0801: RSYIEAVVTV QSGLRGMAAR DVLGRKIKAT LAIQIHCRRY LAESHYKKLK KAAITTQSAW RARLARRELR ELKMAAKETG ALQAAKSKLE KQVEDLTLRL
0901: QLEKRMRVDV EESKTQENAK LQLALKEIQL QFKETEVSLL KEVEAAKKTA EMVPPVVKEE VPIVVDTELV EKLKSENDNL KSMLSSLEQK IDETEKKFKE
1001: KVKQALEAED KIVNLKTAMH KLQETLEDVI NENHVLKQSA LSTPVKTASG RFFPSTPVKN LQNAEENQLT GTMFTTPARI QESRGGSHID PQNEDVDDLI
1101: NCVTKNVGFS QGKPVAAFTI YKCLLHWKSF EAERTNVFDR LIQMIGSAIK NEEDNANLAY WLSNTSTLLF MLQQSLRSGG TGATPLRKSP SLVRWMTKGF
1201: RSPAAEAIRP VDAKAPALHF KQQLAAYVEK IIGIMWDKLK KELNTSLTLC IQAPKTFKGT ALMSDSTAKY WQGIIEGLDA LLSTLRENFV PLVLIQKILS
1301: QAFSLINVQL WNSVMTRPDN CSFINGEYLK SGLEKLENWC LETNDEYAGS SWDELKHIRQ AVGFLRIHNK FKISYDEIAK KLCPILRIQQ HFRLCTLYKD
1401: EIYYTKSVSQ EVIENMAGVM TDSSDFLLKD DSSNSISFLI DDLSSSMQDK DFAQVKPAEE LVENPAFSFL Q
Best Arabidopsis Sequence Match ( AT2G20290.1 )
(BLAST)
0001: MVFKVFSFVA FMACSTVKVG SIVWVQDPEE AWIDGEVVEV NGEDIKVQCT SGKTVVAKGS NTYPKDMEVP PSGVDDMTTL AYLHEPGVLQ NLKSRYYIDE
0101: IYTYTGNILI AVNPFKQLPN LYNDHMMAQY KGAALGELSP HPFAVADAAY RQMINEGISQ SILVSGESGA GKTETAKMLM KYLAKMGGRA VSDRRTVEDQ
0201: VLESNPVLEA FGNAKTVKNN NSSRFGKFVE IQFDQRGRIS GAAIRTYLLE RSRVCQVSDP ERNYHCFYML CAAPPEDKRK LKLNDPTEFR YLNQSHCIKL
0301: DGVDDSKEYT KTREAMGIVG INLEEQEAIF RVVAAILHLG NIEFAIGEEP DSSVPTDESK KYLKIAAELF MCDEQALEDS LCKRIMVTPE ETISRCLDPN
0401: SAALSRDALA KFVYSRLFDW IVNKINNSIG QDPDSKDMIG VLDIYGFESF KTNSFEQFCI NLTNEKLQQH FTQHVLKMEQ EEYTKEEIEW SQITFPDNRY
0501: VLELIEKKRG GIIALLDEAC MFPRSTHKTF SQKLYETLKD NKYFSKPKLS RTDFTICHYA GDVTYQTEQF LEKNKDYVVA EHQALLGASR CTFIAGLFPP
0601: LVEDANKQSK FSSIASQFKQ QLASLIEGLN TTEPHYIRCV KPNNLLKPSI FENQNSLQQL RCGGVMETIR VCRAGYPTRK HFDEFLDRFG ILDSATLDKS
0701: SDEKAACKKL LETVGLNGFQ IGKTKVFLKA GQMAELDDRR TEVLGRAACI IQWKFRSYLT RQSFIMLRNA AINIQAVYRG QVARYRFENL RREAAALKIQ
0801: RALRIHLDRK RSYIEAVVTV QSGLRGMAAR VVLRRKTKAT TVIQSHCRRL RAELHYKKLK KAAITTQSAW RARLARKELR KLKTDARDTV VLQAAKSMLA
0901: EKVEELTWRL DLEKRMRVDM EVSKAQENAK LQLALEEIQL QFEETKVSLL KEVEAAKKTA AIVPVVKEVP VVDTVLMEKL TSENEKLKSL VTSLELKIDE
1001: TEKKFEETKK ISEERLKKAL DAENKIDNLK TAMHNLEEKL KEVKLENNFL KESVLTTPVK TASGRFLSTP LKNLQNGLFT SEESQLSGAE FTTPPRIQES
1101: GSDTKSRGSH IDPQHEDVDA LINSVTKNVG FSQGKPVAAF TIYKCLLHWK SFEAERTNVF DRLVQMIGSA IKDEDNDANL AYWLSNTSTL LFMLQQSLKS
1201: GGTGATPLRQ SPSLVRWMTK GFRSPAAEAI RPVDAKDPAL HFKQQLEAYV EKILGIIWDN LKKELNTVLA LCIQAPKTFK GNALISITTA NYWQDIIEGL
1301: DALLSTLKES FVPPVLIQKI FSQAFSLINV QVCNSLVTRP DNCSFINGEY LKSGLEKLEK WCCETKEEYA GSSWDELKHT RQAVGFLLIH KKYNISYDEI
1401: ANDLCPNLQI QQHFKLCTLY KDEIYNTKSV SQDVIASMTG VMTDSSDFLL KEDSSNIISL SIDDLCSSMQ DKDFAQVKPA EELLENPSFI FLH
Arabidopsis Description
XI-GMyosin-13 [Source:UniProtKB/Swiss-Prot;Acc:F4IUG9]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.