Factsheet for VIT_07s0005g04790.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g064200.2.1	Tomato	plastid	82.21	82.43
KRH32270	Soybean	cytosol	81.95	82.17
PGSC0003DMT400056647	Potato	cytosol	81.95	82.17
KRH19659	Soybean	cytosol	82.15	82.09
KRH67505	Soybean	cytosol	80.3	80.62
KRG95788	Soybean	cytosol	80.3	80.36
Solyc06g008090.2.1	Tomato	cytosol	78.46	80.26
VIT_05s0051g00050.t01	Wine grape	cytosol	77.14	78.7
VIT_00s0268g00030.t01	Wine grape	cytosol	22.6	77.08
OQU85951	Sorghum	cytosol	76.94	76.79
Os02t0816900-01	Rice	cytosol, plasma membrane	64.03	76.6
HORVU6Hr1G091010.24	Barley	cytosol	75.69	76.04
CDY32922	Canola	cytosol	75.43	75.98
TraesCS6A01G390800.2	Wheat	cytosol	75.43	75.83
TraesCS6D01G377100.1	Wheat	cytosol	75.43	75.83
Zm00001d018481_P033	Maize	cytosol	76.28	75.74
PGSC0003DMT400038143	Potato	cytosol	42.49	75.7
TraesCS6B01G431400.1	Wheat	cytosol	75.3	75.7
Bra027512.1-P	Field mustard	cytosol	61.13	75.45
CDX94736	Canola	cytosol	75.82	75.33
AT1G04160.1	Thale cress	cytosol	74.18	75.07
Bra011053.1-P	Field mustard	cytosol	74.44	75.03
CDY64313	Canola	cytosol	75.1	74.95
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	75.49	74.42
Bra032526.1-P	Field mustard	cytosol	73.72	74.4
CDY32531	Canola	endoplasmic reticulum	73.58	73.92
CDY10075	Canola	endoplasmic reticulum	73.65	73.8
AT5G43900.3	Thale cress	cytosol	75.56	73.29
AT4G28710.1	Thale cress	cytosol	73.12	73.22
GSMUA_AchrUn_...	Banana	cytosol	73.52	72.47
Os03t0860700-00	Rice	cytosol, plasma membrane	42.29	72.22
GSMUA_Achr3P27420_001	Banana	cytosol	78.99	71.84
Bra033704.1-P	Field mustard	cytosol, plastid	75.43	69.06
AT2G20290.1	Thale cress	endoplasmic reticulum	67.85	68.99
KXG34975	Sorghum	cytosol	65.22	68.65
Bra036688.1-P	Field mustard	cytosol	65.15	68.44
CDY39766	Canola	cytosol	65.55	67.69
CDY03315	Canola	cytosol	65.55	67.64
Zm00001d019495_P001	Maize	cytosol	67.06	67.6
VIT_16s0115g00220.t01	Wine grape	cytosol	11.86	67.42
TraesCS1D01G174000.2	Wheat	cytosol	66.73	67.13
TraesCS1A01G166900.2	Wheat	cytosol	66.67	67.02
HORVU1Hr1G044020.1	Barley	cytosol	66.4	66.8
TraesCS1B01G183200.1	Wheat	cytosol	66.4	66.75
Bra036460.1-P	Field mustard	cytosol	65.28	66.6
EER90459	Sorghum	cytosol	64.95	66.44
Zm00001d034927_P001	Maize	cytosol	64.76	65.8
VIT_11s0016g01710.t01	Wine grape	cytosol	65.61	65.57
VIT_14s0081g00160.t01	Wine grape	cytosol	65.61	65.4
HORVU5Hr1G125430.15	Barley	cytosol	62.71	64.67
TraesCS4A01G313500.1	Wheat	cytosol	63.11	64.42
TraesCS5B01G566200.1	Wheat	cytosol	63.11	64.42
TraesCS5D01G558600.1	Wheat	cytosol	63.11	64.38
CDY31978	Canola	cytosol	64.95	64.11
VIT_09s0002g01910.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	65.48	63.8
CDY05734	Canola	cytosol	65.48	62.99
VIT_13s0320g00070.t01	Wine grape	cytosol	63.57	62.02
VIT_07s0005g02970.t01	Wine grape	cytosol	46.11	61.24
CDY65572	Canola	plastid	74.31	59.34
CDY35211	Canola	plastid	74.18	59.08
GSMUA_Achr1P03340_001	Banana	cytosol	70.03	57.21
VIT_04s0079g00370.t01	Wine grape	cytosol	15.35	56.69
VIT_04s0008g01990.t01	Wine grape	cytosol	54.81	54.59
VIT_14s0030g02000.t01	Wine grape	cytosol	0.46	43.75
VIT_10s0071g00210.t01	Wine grape	plastid	25.69	33.05
VIT_19s0014g03640.t01	Wine grape	cytosol	24.44	30.99

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	EntrezGene:100256590	wikigene:100256590
MapMan:20.2.4.1	Gene3D:3.30.70.3240	Gene3D:3.40.850.10	ProteinID:CCB60202	ProteinID:CCB60202.1	ncoils:Coil
InterPro:Dilute_dom	UniProt:F6HZT6	EMBL:FN596502	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459	GO:GO:0016787
InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710	InterPro:IPR004009	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS
InterPro:Kinesin_motor_dom_sf	EntrezGene:LOC100256590	wikigene:LOC100256590	InterPro:MYSc_Myo11	InterPro:MyosinXI_CBD	InterPro:Myosin_N
InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PFAM:PF01843	PFAM:PF02736
PRINTS:PR00193	PFscan:PS50096	PFscan:PS51126	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140
PANTHER:PTHR13140:SF256	SMART:SM00015	SMART:SM00242	SMART:SM01132	SUPFAM:SSF52540	TIGR:TC52203
TIGR:TC55370	UniParc:UPI00015CA3EC	ArrayExpress:VIT_07s0005g04790	EnsemblPlantsGene:VIT_07s0005g04790	EnsemblPlants:VIT_07s0005g04790.t01	unigene:Vvi.6031
RefSeq:XP_002268099	RefSeq:XP_002268099.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:+:8037508..8057295

Molecular Weight (calculated)

172217.0 Da

IEP (calculated)

7.877

GRAVY (calculated)

-0.374

Length

1518 amino acids

Sequence
(BLAST)

0001: MTFFDLQAAS VSLGVGSLVW VEDPELAWLD GEVVEVNGDT IKVACTSGKT VVVKGSNVYP KDAEAPPCGV DDMTKLAYLH EPGVLQNLRS RYDMNEIYTY
0101: TGSILIAVNP FTRLPHLYDN HMMAQYKGAA FGELSPHPFA VADAAYRLMM NEKISQSILV SGESGAGKTE STKLLMRYLA YMGGRSVAEG RTVEQQVLES
0201: NPVLEAFGNA KTVRNNNSSR FGKFVEIQFD QRGRISGAAI RTYLLERSRV CQVSDPERNY HCFYMLCAAP AEDVQRFKLG NARTFHYLNQ SNCYELEGVD
0301: DSKEYIATRK AMDIVGISSD EQEGIFRVVA AILHLGNIEF KKGKETDSSE PKDEKSRFHL RTAAELFMCD EKALEDSLCK RIIVTRDETI TKCLDPHSAT
0401: LSRDALAKIV YSRLFDWLVD NINCSIGQDP DSKCLIGVLD IYGFESFNTN SFEQFCINLT NEKLQQHFNQ HVFKMEQEEY TKEEIDWSYI DFVDNKDVLE
0501: LIEKKPGGII ALLDEACMFP RSTHETFSQK LYQTFKNHKR FSKPKLSRTD FTICHYAGDV TYQTDLFLDK NKDYVVAEHQ ALLSASNCSF VAGLFPPLSE
0601: ESSKSSKFSS IGSRFKQQLQ ALLETLSVTE PHYIRCVKPN NLLKPAIFEN KNVLQQLRCG GVMEAIRISC AGYPTKKPFD EFIDRFGILA PEVLDGSSDE
0701: VAACKRLLEK VGLKGYQIGK TKVFLRAGQM ADLDARRSEV LGRSASIIQR KVRSYLSRRS FISLRHSAIQ LQAACRGQLA RKVYESMRRE ASALRIQKDL
0801: RMFLARKAYK ELCSSALCIQ RGMRGLAARN ELRFRRQTRA AIVIQSQCRK YLAHLHYMRL KKAAITTQCA WRGRVARKEL RKLKMAAKET GALQAAKNKL
0901: EKQVEELTWR LQLEKRMRAD LEEAKTQENA KLQSALQEVQ LEFKETKELL MKEREVAKRA AEQIPVIQEV SVIDHAMLDK LTAENEKLKS LVSSLEKRID
1001: ETQKKYEETN KLSEERLKQA LEADQKIVQL KTAMQRLEEK FSDVESENQI LRQQALLKTP VKRIADILST PEKSQGLENG HHLSEENGAN EPMSAMPIKE
1101: VETDSDSKMR KSHIERQYDD IDALIKCVSK DIGFSQGKPV AAFTIYKCLL QWKSFEAERT SVFDRLIQMI GSAIENQDNN DHMAYWLSNT STLLFLLQKS
1201: LTSTGAAGAA PRRKPPPTSL FGRMAMGFRS SPSAYLAAPP FEVVRQVEAK YPALLFKQQL TAYVEKIYGI VRDNLKKELT PLLSLCIQAP RTSKGTALRS
1301: GRSFGKDSPS SHWQSIIECL NTLLCTFKEN FVPPILVEKI FTQTFSYINV QLFNSLLLRR ECCTFSNGEY VKSGLAELEL WCAQAKEEYA GSSWDELKHI
1401: RQAVGFLVIH QKYRISYDEI TNDLCPILSV QQLYRICTLY WDSNYNTRSV SPDVISSMRV LMTEDSNNAV SSSFLLDENS SIPFSVDDLS NSLQEKDFTD
1501: VKPAEELLDN SAFQFLQE

Best Arabidopsis Sequence Match ( AT5G43900.3 )
(BLAST)

0001: MFLDAAKSDS RFSVCVCDTV LLYVYHVNKT KSPQKVEESR EARKGKNKIQ KAEVFDLRNE MVANFNPSVG SFVWVEDPDE AWIDGEVVQV NGDEIKVLCT
0101: SGKHVVTKIS NAYPKDVEAP ASGVDDMTRL AYLHEPGVLQ NLHSRYDINE IYTYTGSILI AVNPFRRLPH LYSSHMMAQY KGASLGELSP HPFAVADAAY
0201: RQMINDGVSQ SILVSGESGA GKTESTKLLM RYLAYMGGRA AAEGRSVEQK VLESNPVLEA FGNAKTVRNN NSSRFGKFVE IQFDEKGRIS GAAIRTYLLE
0301: RSRVCQVSDP ERNYHCFYML CAAPQEDVKK FKLEEPKKYH YLNQSKCLEL DSINDAEEYH ATRRAMDVVG ISTEEQDAIF SVVAAILHIG NIEFAKGEEI
0401: DSSIPKDDKS LFHLKTAAEL LSCDEKALED SLCKRIMVTR DETITKTLDP EAATLSRDAL AKVMYSRLFD WLVDKINSSI GQDHDSKYLI GVLDIYGFES
0501: FKTNSFEQFC INLTNEKLQQ HFNQHVFKME QEEYKKEEIN WSYIEFVDNQ DILDLIEKKP GGIIALLDEA CMFPRSTHET FAQKLYQTFK THKRFTKPKL
0601: ARSDFTICHY AGDVTYQTEL FLDKNKDYVI AEHQALLNSS SCSFVASLFP PMSDDSKQSK FSSIGTRFKQ QLVSLLEILN TTEPHYIRCI KPNNLLKPGI
0701: FENENILQQL RCGGVMEAIR ISCAGYPTRK HFDEFLARFG ILAPEVLVKN SDDPAACKKL LDKVGLEGYQ IGKTKVFLRA GQMADLDTRR TEVLGRSASI
0801: IQRKVRSYLA KKSFIVLRNS AKQIQSVCRG YLARSVYEGM RREAAALKIQ RDLRRFLARK AYTELYSAAV SVQAGMRGMV ARKELCFRRQ TKAAIIIQTW
0901: CRGYLARLHY RKLKKAAITT QCAWRSKVAR GELRKLKMAA RETGALQAAK NKLEKQVEEL TWRLQLEKRI RTDLEEAKKQ ESAKAQSSLE ELQLKCKETE
1001: ALLIKEREAA KKIAETAPII KEIPVVDQEL MDKITNENEK LKSMVSSLEM KIGETEKKLQ ETTKISQDRL NQALEAESKL VKLKTAMQRL EEKILDMEAE
1101: KKIMHQQTIS TPVRTNLGHP PTAPVKNLEN GHQTNLEKEF NEAEFTTPVD GKAGKSAAER QIMNVDALID CVKDNIGFSN GKPVAAFTIY KCLLHWKCFE
1201: SEKTNVFDRL IQMIGSAIEN EDDNSHLAYW LTSTSALLFL LQKSLKTNGS GATQSKKPPA STSLFGRMAM SFRSSPASGN LAAAAEAAAL AVVRPVEAKY
1301: PALLFKQQLA AYVEKMFGMV RDNLKRELST LLSLCIQAPR SSKGGMLRSG RSFGKDSPAV HWQSIIDGLN SLLVTLKENH VPLVLIQKIY SQTFSYINVQ
1401: LFNSLLLRKE CCTFSNGEFV KSGLAELELW CCQAKEYSGP SWEELKHIRQ AVGFLVIHQK YRISYDEIAN DLCPVLSVQQ LYRICTLYWD DSYNTRSVSQ
1501: EVISSMRTLM TEESNDADSD SFLLDDDSSI PFSIDDISSS MEEKDFVGIK PAEELLENPA FVFLH

Arabidopsis Description

MYA2Myosin 2 [Source:UniProtKB/TrEMBL;Acc:F4K7C5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.