Factsheet for VIT_11s0016g01710.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02661	Soybean	cytosol	85.45	84.84
KRH19248	Soybean	cytosol	85.32	84.71
Solyc07g041150.2.1	Tomato	nucleus	84.53	83.98
PGSC0003DMT400053991	Potato	cytosol	84.4	83.85
AT5G20490.2	Thale cress	cytosol	81.9	81.25
Bra006561.1-P	Field mustard	cytosol	81.63	80.68
VIT_09s0002g01910.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	82.62	80.55
GSMUA_Achr8P26250_001	Banana	cytosol	81.11	80.47
CDX70927	Canola	cytosol	82.09	80.14
CDY66597	Canola	cytosol	80.25	80.09
Bra020105.1-P	Field mustard	cytosol	80.12	79.7
GSMUA_Achr5P09720_001	Banana	cytosol	81.96	79.65
CDY51846	Canola	cytosol	81.96	78.75
CDY45087	Canola	cytosol	80.25	78.7
EES03165	Sorghum	cytosol	79.0	78.48
Zm00001d044303_P003	Maize	plasma membrane	78.6	78.09
HORVU3Hr1G050290.1	Barley	cytosol	78.28	77.76
TraesCS3A01G209500.1	Wheat	cytosol	77.95	77.69
Os03t0686300-00	Rice	plasma membrane	79.0	77.57
TraesCS3D01G212400.3	Wheat	cytosol	77.95	77.44
TraesCS3B01G239700.1	Wheat	cytosol, golgi	77.95	77.44
VIT_14s0081g00160.t01	Wine grape	cytosol	77.42	77.22
GSMUA_AchrUn_...	Banana	cytosol	42.66	72.73
Os01t0713900-01	Rice	cytosol	17.18	70.16
Zm00001d038844_P001	Maize	cytosol	28.51	68.73
Os05t0537200-01	Rice	cytosol, plasma membrane	16.72	68.28
VIT_00s0268g00030.t01	Wine grape	cytosol	19.88	67.87
VIT_07s0005g02970.t01	Wine grape	cytosol	50.43	67.02
VIT_07s0005g04790.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.57	65.61
VIT_05s0051g00050.t01	Wine grape	cytosol	63.2	64.52
VIT_13s0320g00070.t01	Wine grape	cytosol	65.44	63.88
VIT_16s0115g00220.t01	Wine grape	cytosol	10.8	61.42
VIT_04s0008g01990.t01	Wine grape	cytosol	54.84	54.66
VIT_04s0079g00370.t01	Wine grape	cytosol	14.15	52.31
Os05t0537300-01	Rice	cytosol, mitochondrion, peroxisome	12.24	51.81
VIT_14s0030g02000.t01	Wine grape	cytosol	0.46	43.75
TraesCS1A01G358500.1	Wheat	cytosol	59.38	43.3
TraesCS1B01G375000.1	Wheat	cytosol	60.57	42.95
HORVU1Hr1G080240.9	Barley	cytosol	60.63	42.9
TraesCS1D01G363400.1	Wheat	cytosol	60.3	42.62
OQU78360	Sorghum	cytosol	57.8	40.84
TraesCS3A01G248800.7	Wheat	cytosol	63.59	40.4
OQU87414	Sorghum	cytosol	63.46	40.39
TraesCS3B01G277500.1	Wheat	cytosol	63.46	40.37
TraesCS3D01G248700.2	Wheat	cytosol	63.33	40.34
Zm00001d011713_P003	Maize	endoplasmic reticulum	59.64	38.31
Zm00001d043667_P003	Maize	endoplasmic reticulum	45.89	34.87
Zm00001d038845_P002	Maize	nucleus	31.4	33.73
VIT_10s0071g00210.t01	Wine grape	plastid	26.0	33.47
VIT_19s0014g03640.t01	Wine grape	cytosol	24.82	31.5
HORVU3Hr1G067400.2	Barley	cytosol	38.38	31.06

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	EntrezGene:100243893	wikigene:100243893
MapMan:20.2.4.1	Gene3D:3.30.70.3240	Gene3D:3.40.850.10	ProteinID:CCB51429	ProteinID:CCB51429.1	ncoils:Coil
InterPro:Dilute_dom	UniProt:F6HGV3	EMBL:FN595756	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459	GO:GO:0016787
InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf
EntrezGene:LOC100243893	wikigene:LOC100243893	InterPro:MYSc_Myo11	InterPro:MyosinXI_CBD	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase
PFAM:PF00063	PFAM:PF00612	PFAM:PF01843	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51126
PFscan:PS51456	PANTHER:PTHR13140	PANTHER:PTHR13140:SF510	SMART:SM00015	SMART:SM00242	SMART:SM01132
SUPFAM:SSF52540	TIGR:TC57724	UniParc:UPI0002107F5F	ArrayExpress:VIT_11s0016g01710	EnsemblPlantsGene:VIT_11s0016g01710	EnsemblPlants:VIT_11s0016g01710.t01
unigene:Vvi.12152	RefSeq:XP_002279028	RefSeq:XP_002279028.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:-:1354858..1369503

Molecular Weight (calculated)

172763.0 Da

IEP (calculated)

8.761

GRAVY (calculated)

-0.365

Length

1519 amino acids

Sequence
(BLAST)

0001: MEKCFGLIVK RFMFISQMGK LDSHLEENNF LVITVVTNIS KVFPKDTEAP PGGVDDMTKL SYLHEPGVLQ NLATRYELNE IYTYTGNILI AVNPFQRLPH
0101: LYDTHMMEQY KGATFGELSP HVFAVADVAF RAMMNEGKSN SILVSGESGA GKTETTKMLM RYLAYLGGRS GVEGRTVEQQ VLESNPVLEA FGNAKTVRNN
0201: NSSRFGKFVE IQFDKNGRIS GAAIRTYLLE RSRVCQISDP ERNYHCFYLL CAAPPEEREK YKLGNPKSFH YLNQSNCYEL DGVNDAHEYH ATRRAMDVVG
0301: ISEEEQEAIF RVVAAVLHLG NIEFAKGKDI DSSIIKDEES RFHLNMTAEL LNCDAKGLED AMIKRVMVTP EEVITRPLDP DSALGSRDAL AKTIYSRLFD
0401: WLVNKINDSI GQDPNSKSLI GVLDIYGFES FKFNSFEQFC INFTNEKLQQ HFNQHVFKME QEEYTKEEIN WSYIEFVDNQ DVLDLIEKKP GGIIALLDEA
0501: CMFPKSTHET FAQKLYQTFK NNKRFIKPKL SRTSFSISHY AGEVTYLADL FLDKNKDYVV AEHQDLLSAS KCPFVASLFP LLPEESSKSS KFSSIGSRFK
0601: LQLQSLMETL NSTEPHYIRC VKPNNVLKPA IFENLNIIQQ LRCGGVLEAI RISCAGYPTR RTFYEFLLRF GVLAPEVLEG NYDDKVACQM ILDKKGLKGY
0701: QVGKTKVFLR AGQMAELDAR RAEVLGNAAR IIQRQIRTYI ARKEFMALRK AAIQLQSQWR GKLACKLYEQ MRREASAVRI QKNLRRYTAR KSYLTVWSTA
0801: ITLQTGLRAM TARNEFRFRK QTKAAILIQA HLRCHRAYSY YKSLQKAAIV SQCGWRRRVA RRELRKLKMA ARETGALKEA KDKLEKRVEE LTWRLQFEKR
0901: LRTDLEEAKA QEIAKFQDAL HEMQLQVEEA NARVIKEQEA ARKAIEEAPP VIKETPVIVQ DTEKIDLLTA EVESLKALLL SESKAAEEAR KASTDAEARN
1001: AELVKKLEDA DRKMDQLQDS MQRLEEKLSN SESENQVLRQ QALAMSPTRK AVSALPKPTI VQRTPENGNI VNGEMKVASD LTLSISNPRE TESEEKPQKS
1101: LNEKHQENQD LLIRCITQNL GFSGSKPVAA CVIYKCLLHW RSFEVERTSV FDRIIQTIAS AIEVHDNNDV LAYWLSNSST LLLLLQHTLK ASGAASLTPQ
1201: RRRATSASLF GRMSQGLRTP PQSAGISFLN GRMLGRPDDL RQVEAKYPAL LFKQQLTAFL EKIYGMIRDS LKKEIAPLIG LCIQAPRTSR ASLVKGRSQA
1301: NAVAQQALMA HWQSIVKSLN SYLKTMKANY VPPFLVRKVF TQIFSFINVQ LFNSLLLRRE CCSFSNGEYV KSGLAELEQW CSYATEEYAG SAWDELKHIR
1401: QAVEFLVIHQ KPKKTLNEIM KELCPVLSIQ QLYRISTMYW DDKYGTHSVS SEVISSMRIM MTEASNNSVS SSFLLDDDSS IPFTVDDISK SMKQVDTDVD
1501: PPSLIRENSG FVFLLQRSE

Best Arabidopsis Sequence Match ( AT5G20490.2 )
(BLAST)

0001: MVGPVNIIVG SHVWIEDPGA AWIDGEVVKI NGEEVHAHTT NGKTVVANIA NVFPKDTEAP PGGVDDMTKL SYLHEPGVLN NLAMRYELNE IYTYTGNILI
0101: AVNPFQRLPH LYDTHMMEQY KGAGFGELSP HVFAIAEVAY RAMINEGKSN SILVSGESGA GKTETTKMLM RYLAYLGGRS GVEGRTVEQQ VLESNPVLEA
0201: FGNAKTLRNN NSSRFGKFVE LQFDNCGRIS GAAVRTYLLE RSRVCQISDP ERNYHCFYLL CAAPPEEREK FKLGDPKLFH YLNQSKCYKL DGVDDTEEYL
0301: ATRRAMDIVG ISEEEQDAIF RVVAAILHLG NVNFAKGKEI DSSVLKDEKS RYHLDVCAEL LRCDAKKMED ALIKRVMVTP EEVITRTLDP DSATGSRDAL
0401: AKTIYSRLFD WLVDKINNSI GQDPNSKTII GVLDIYGFES FKINSFEQFC INFTNEKLQQ HFNQHVFKME QEDYTKEEIN WSYIEFVDNK DVLELIEKKP
0501: GGVIALLDEA CMFPKSTHET FAQKLYQTFK NYKRFTKPKL SRTSFAISHY AGEVTYQADL FLDKNKDYVV AEHQDLLIAS SDTFVAGLFP RLPEETSSKT
0601: KFSSIGSRFK LQLQSLMETL SSTEPHYIRC VKPNNVLKPA IFENVNVIQQ LRCGGVLEAI RISCAGYPTK RTFYEFLNRF GVLAPEVLEG NYDDKVACKM
0701: LLDKIGLKGY ELGKTKVFLR AGQMAELDAR RAEVLGNAAR RIQRQSRTFI ACKEFRALRG AAIVLQSNCR GKLACNLYEE MRRQAAAVKI QKIFRRHIAR
0801: ESYLRIRHST ITVQTALRGM VARNEFRFRK QMKAATIIQA RLRSHLTHSY YKQLQKAALS TQCGWRSRVA RKELRTLKMA ARDTGALREA KDKLEKRVEE
0901: LTWRLQLEKR QRTELEEAKT QEYAKQQEAL ETMRLQVEEA NAAVIREREA ARKAIEEAPP VIKETPVLVE DTEKINSLTS EVEALKASLQ AERQAAENLR
1001: KAFSEAEARN SELATELENA TRKADQLHES VQRLEEKLSN SESEIQVLRQ QALAISPTSR TMATRSKTML LPRTPENGNY LNGGTKTTPD MTLAVREPES
1101: EEKPQKHLNE KQQENQDLLV KCISQNLGYN GDKPVAACVI YKCLLHWRSF EVERTSVFDR IIQTIATAIE VPDNNEVLAY WLSNSATLLL LLQRTLKATG
1201: AASLTPQRRR TTSASLFGRM SQGLRGSPQS AGLSFLNRQG LTKLDDLRQV EAKYPALLFK QQLTAFLEKI YGMIRDNLKK EISPLLGLCI QAPRTSRASL
1301: VKGRAQANAV AQQALIAHWQ SIRKSLNSYL NLMKANNAPP FLVRKVFTQI FSFINVQLFN SLLLRRECCS FSNGEYVKAG LAELEQWCIE ATDEYAGSAW
1401: DELRHIRQAV GFLVIHQKPK KTLDEITREL CPVLSIQQLY RISTMYWDDK YGTHSVSSDV IANMRVMMTE DSNNAVSSSF LLDDDSSIPF TVEDISKSMQ
1501: QVDVNDIEPP QLIRENSGFG FLLTRKEGST S

Arabidopsis Description

XI-KMyosin-17 [Source:UniProtKB/Swiss-Prot;Acc:F4K5J1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.