Factsheet for Os05t0537200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0713900-01
Os03t0164800-00
Os03t0650800-00
Os03t0686300-00
Os03t0799200-01
Os05t0537200-01
Os05t0537300-01
Os10t0414800-01
Os12t0488700-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17580.1	Os03t0164800-00	AT1G08800.1	23995081
AT1G17580.1	Os03t0799200-01	AT1G08800.1	23995081
AT1G17580.1	Os10t0414800-01	AT1G08800.1	23995081
AT1G17580.1	Os01t0713900-01	AT1G17580.1	18429938
AT1G17580.1	Os03t0686300-00	AT1G17580.1	18429938
AT1G17580.1	Os05t0537200-01	AT1G17580.1	18429938
AT1G17580.1	Os05t0537300-01	AT1G17580.1	18429938
AT1G17580.1	Os03t0650800-00	AT5G06560.1	23995081
AT1G17580.1	Os12t0488700-00	AT5G06560.1	23995081

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0713900-01	Rice	cytosol	83.6	83.6
Zm00001d038844_P001	Maize	cytosol	90.59	53.49
Os10t0395150-00	Rice	plasma membrane	57.53	39.27
GSMUA_AchrUn_...	Banana	cytosol	68.01	28.4
Os03t0860700-00	Rice	cytosol, plasma membrane	44.62	18.67
CDX81833	Canola	cytosol	73.12	18.57
VIT_09s0002g01910.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	75.81	18.1
GSMUA_Achr8P26250_001	Banana	cytosol	74.46	18.09
KRH19248	Soybean	cytosol	74.19	18.04
Bra030993.1-P	Field mustard	cytosol	73.12	18.01
Bra020105.1-P	Field mustard	cytosol	73.92	18.01
KRH02661	Soybean	cytosol	73.92	17.97
CDY21744	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	73.12	17.94
CDY66597	Canola	cytosol	73.39	17.94
GSMUA_Achr5P09720_001	Banana	cytosol	75.27	17.91
Bra006561.1-P	Field mustard	cytosol	73.92	17.89
Solyc07g041150.2.1	Tomato	nucleus	73.39	17.85
PGSC0003DMT400053991	Potato	cytosol	73.12	17.79
Os03t0686300-00	Rice	plasma membrane	73.92	17.78
CDY45087	Canola	cytosol	73.92	17.75
AT5G20490.2	Thale cress	cytosol	72.85	17.7
AT1G17580.1	Thale cress	cytosol	72.31	17.7
Os03t0747900-00	Rice	cytosol, plasma membrane	69.09	17.68
CDX70927	Canola	cytosol	73.66	17.61
Os06t0488200-01	Rice	cytosol, plasma membrane	71.51	17.4
CDY51846	Canola	cytosol	73.66	17.33
VIT_11s0016g01710.t01	Wine grape	cytosol	68.28	16.72
OQU78360	Sorghum	cytosol	91.67	15.86
HORVU1Hr1G080240.9	Barley	cytosol	90.32	15.65
TraesCS1B01G375000.1	Wheat	cytosol	89.25	15.5
TraesCS1D01G363400.1	Wheat	cytosol	88.98	15.4
TraesCS1A01G358500.1	Wheat	cytosol	74.73	13.35
Os10t0488800-01	Rice	cytosol	29.84	11.68
Os07t0562800-01	Rice	plasma membrane	39.25	11.66
Os02t0816900-01	Rice	cytosol, plasma membrane	22.31	6.54
Os05t0537300-01	Rice	cytosol, mitochondrion, peroxisome	0.81	0.84
Os03t0747800-01	Rice	plasma membrane	0.27	0.31
Zm00001d038845_P002	Maize	nucleus	0.27	0.07
Os10t0395100-01	Rice	cytosol	0.0	0.0
Os10t0339400-01	Rice	cytosol	0.0	0.0
Os02t0777700-00	Rice	cytosol	0.0	0.0
Os02t0545000-01	Rice	cytosol, nucleus	0.0	0.0
Os01t0584200-00	Rice	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:3.40.850.10	MapMan:35.1	ProteinID:BAF18081.1	ProteinID:BAS95089.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459
GO:GO:0016787	InterPro:IPR001609	InterPro:IPR004009	InterPro:IPR036961	InterPro:Kinesin_motor_dom_sf	InterPro:Myosin_N
InterPro:Myosin_head_motor_dom	EnsemblPlantsGene:Os05g0537200	EnsemblPlants:Os05t0537200-01	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF02736
PRINTS:PR00193	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF510	UniProt:Q0DGE2
SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI0000E125B3	:	:	:

Description

OsSTA158Similar to Myosin XI (Fragment). (Os05t0537200-01)

Coordinates

chr5:+:26685979..26690338

Molecular Weight (calculated)

41680.7 Da

IEP (calculated)

6.997

GRAVY (calculated)

-0.301

Length

372 amino acids

Sequence
(BLAST)

001: MAATLKIVLG SHIWLEDKDL AWIDGEVFRI EGQKAHIRTT NGNMVVASIS DIHPKDTEVH SDGIDDMIRL SYLHEPGVLN NLSVRYAKNI IYTYTGNILI
101: AINPFQRLPH LAEPHTMEKY KGANFGELDP HVFAIADISY RQMMNERKSN SILVSGESGA GKTETTKMLM RYLAFLGGRS RTGGRTVEQQ VLESNPVLEA
201: FGNAKTVRNN NSSRFGKFVE IQFDKSGKIS GAAIRTYLLE RSRVCQINSP ERNYHCFYFL CAAPSEEIRK YNLGDPSSFH YLNQSTCIKV DGISDNEEYL
301: ATRSAMNTVG ITEQEQEAIF RVVAAVLHLG NINFVKGREV DSSVIKDEKA RFHLNAAAEL LMCDHGKLEN AL

Best Arabidopsis Sequence Match ( AT1G08730.2 )
(BLAST)

0001: MGTPVNIIVG SHVWFEDPEV AWIDGEVEKI NGQEVVIQAT TGKKVTAKLS KIYPKDVEAP AGGVDDMTKL SYLHEPGVLQ NLKIRYELNE IYTYTGNILI
0101: AINPFQRLPH IYDAHMMQQY KGAPLGELSP HVFAVADVAY RAMINEGKSN SILVSGESGA GKTETTKMLM RYLAYLGGRA VTEGRTVEQQ VLESNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE IQFDKQGRIS GAAIRTYLLE RSRVCQISDP ERNYHCFYLL CAAPQEEIEK YKLGHPKTFH YLNQSKCFEL VGISDAHDYL
0301: ATRRAMDIVG ISEKEQEAIF RVVAAILHIG NIDFTKGKEV DSSVPKDEKS KFHLKTAAEL LMCDLKALED ALCKRVMITP EEVIKRSLDP QSAVTSRDGL
0401: AKTVYSRLFD WLVDKINKSI GQDANSRSLI GVLDIYGFES FKTNSFEQFC INFTNEKLQQ HFNQHVFKME QEEYTKEAID WSYIEFVDNQ DVLDLIEKKP
0501: GGIVALLDEA CMFPKSTHET FANKLYQTFK THKRFIKPKL SRTDFAVAHY AGEVLYQSEL FLDKNKDYVI PEHQDLLGAS KCPFVVGLFP PLPEETSKSS
0601: KFSSIGSRFK LQLQQLMETL NCTEPHYIRC VKPNNLLKPA IFENVNIMQQ LRCGGVLEAI RISCAGYPTR KPFFEFINRF GLLSPAALEG NFDEKVACQK
0701: ILDNMGLKGY QIGKTKVFLR AGQMAELDAR RAEVLSSAAK KIQRRIRTHQ AQKRFIVLRK ATISLQAICR GRLSCKHYDN LRREAAAVKI QKNGRRHYSR
0801: KSYKKLHVAS LVVQTGLRAM AARKQFRFRK QTKAATIVQA QWRCHRAISY YKKLKNGVVL SQTRWRGRLA KRELRKLKMA ARETGALKEA KDMLEKKVEE
0901: LTYRVQLEKR SRGDLEEAKT QEILKLKSSF EEMRKKVDET NALLLKEREA AKKAAEEAPP VIKETQILVE DTKKIELMTE ELESVKVTLE NEKQRADDAV
1001: RKFEEAQESL EDKKKKLEET EKKGQQLQES LTRMEEKCSN LESENKVLRQ QAVSMAPNKF LSGRSRSILQ RGSESGHLAV DARSNLDLHS HSINHRDPSE
1101: VEDKPQKSLN EKQQENQDLL IRSIVQHLGF QGNRPITACI IYKCLLQWRS FEVERTSVFD RIIQTIGHAI ETQDNNNTLA YWLSNTSTLL LLLQRTLKAS
1201: GAAGMAPQRR RSSSATLFGR MSQSFRGAPP GVNLAMINGA AGGGADTFRQ VEAKYPALLF KQQLTAYVEK IYGMIRDNLK KEISPLLGLC IQAPRTSRAS
1301: LVKGASRSVG NTAAQQALIA HWQGIVKSLT NFLNTLKSNN VPSFLVRKVF TQIFSFINVQ LFNSLLLRRE CCSFSNGEYV KAGLSELEHW CFKATNEYAG
1401: SSWDELKHIR QAIGFLVVHQ KPKKTLDEIS HDLCPVLSIQ QLYRISTMYW DDKYGTHSVS PDVIANMRVL MTEDSNNAVS NSFLLDDDSS IPFSVDDLSK
1501: SMEKFEIADI EPPPLIRENS GFSFLLPVSE

Arabidopsis Description

XI-CMyosin-9 [Source:UniProtKB/Swiss-Prot;Acc:F4HXP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.