Factsheet for AT1G17580.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030993.1-P	Field mustard	cytosol	88.55	89.14
CDX81833	Canola	cytosol	85.66	88.87
CDY21744	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	88.55	88.79
Os01t0713900-01	Rice	cytosol	18.55	75.81
GSMUA_Achr8P26250_001	Banana	cytosol	73.68	73.15
VIT_09s0002g01910.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	74.54	72.72
Os05t0537200-01	Rice	cytosol, plasma membrane	17.7	72.31
AT5G20490.2	Thale cress	cytosol	72.3	71.78
Zm00001d044303_P003	Maize	plasma membrane	71.78	71.35
EES03165	Sorghum	cytosol	71.71	71.29
GSMUA_Achr5P09720_001	Banana	cytosol	73.29	71.27
HORVU3Hr1G050290.1	Barley	cytosol	71.32	70.9
TraesCS3A01G209500.1	Wheat	cytosol	71.05	70.87
TraesCS3B01G239700.1	Wheat	cytosol, golgi	70.99	70.57
TraesCS3D01G212400.3	Wheat	cytosol	70.92	70.5
Os03t0686300-00	Rice	plasma membrane	71.71	70.46
Zm00001d038844_P001	Maize	cytosol	28.75	69.37
GSMUA_AchrUn_...	Banana	cytosol	40.53	69.14
AT1G08730.1	Thale cress	endoplasmic reticulum	66.84	66.06
AT1G54560.1	Thale cress	cytosol	66.45	66.06
AT1G04160.1	Thale cress	cytosol	58.95	59.73
AT4G28710.1	Thale cress	cytosol	58.62	58.77
AT5G43900.3	Thale cress	cytosol	59.54	57.83
AT2G31900.2	Thale cress	cytosol	59.08	57.67
AT2G20290.1	Thale cress	endoplasmic reticulum	55.92	56.93
AT4G33200.4	Thale cress	cytosol	53.82	53.71
AT3G58160.1	Thale cress	cytosol	43.62	53.38
AT1G04600.1	Thale cress	cytosol	56.97	50.06
Os05t0537300-01	Rice	cytosol, mitochondrion, peroxisome	11.71	49.58
AT2G33240.1	Thale cress	cytosol	56.38	48.42
HORVU1Hr1G080240.9	Barley	cytosol	58.22	41.22
TraesCS1B01G375000.1	Wheat	cytosol	57.76	40.99
TraesCS1D01G363400.1	Wheat	cytosol	57.7	40.81
TraesCS1A01G358500.1	Wheat	cytosol	55.33	40.37
OQU78360	Sorghum	cytosol	55.72	39.4
OQU87414	Sorghum	cytosol	61.18	38.96
TraesCS3A01G248800.7	Wheat	cytosol	61.12	38.85
TraesCS3D01G248700.2	Wheat	cytosol	60.92	38.83
TraesCS3B01G277500.1	Wheat	cytosol	60.92	38.78
Zm00001d011713_P003	Maize	endoplasmic reticulum	57.76	37.12
AT5G20470.1	Thale cress	endoplasmic reticulum	13.36	36.51
Zm00001d043667_P003	Maize	endoplasmic reticulum	44.93	34.17
AT1G50360.1	Thale cress	cytosol	25.72	33.91
AT4G27370.2	Thale cress	cytosol	24.87	33.27
AT3G19960.2	Thale cress	cytosol, plastid	25.0	32.31
AT5G54280.2	Thale cress	cytosol	25.66	31.97
Zm00001d038845_P002	Maize	nucleus	28.68	30.83
HORVU3Hr1G067400.2	Barley	cytosol	35.53	28.77

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	MapMan:20.2.4.1	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	EntrezGene:838333	ProteinID:AAF79470.1	ProteinID:AEE29607.1	ArrayExpress:AT1G17580	EnsemblPlantsGene:AT1G17580
RefSeq:AT1G17580	TAIR:AT1G17580	RefSeq:AT1G17580-TAIR-G	EnsemblPlants:AT1G17580.1	TAIR:AT1G17580.1	Unigene:At.21949
ncoils:Coil	InterPro:Dilute_dom	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856
GO:GO:0007015	GO:GO:0007018	GO:GO:0007275	GO:GO:0008017	GO:GO:0008150	GO:GO:0009653
GO:GO:0009791	GO:GO:0009826	GO:GO:0009908	GO:GO:0009987	GO:GO:0010090	GO:GO:0010154
GO:GO:0016043	GO:GO:0016049	GO:GO:0016459	GO:GO:0016787	GO:GO:0030048	GO:GO:0030154
GO:GO:0040007	GO:GO:0042802	GO:GO:0048467	GO:GO:0051301	GO:GO:0051645	GO:GO:0051646
GO:GO:0060151	GO:GO:0090436	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710	InterPro:IPR004009
InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	Symbol:MYA1	InterPro:MYSc_Myo11	InterPro:MyosinXI_CBD
InterPro:Myosin_N	InterPro:Myosin_head_motor_dom	RefSeq:NP_173201.2	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612
PFAM:PF01843	PFAM:PF02736	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51126
PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF510	UniProt:Q39160	SMART:SM00015
SMART:SM00242	SMART:SM01132	SUPFAM:SSF52540	UniParc:UPI00000AB3FD	EMBL:Z28389	SEG:seg

Description

XI-1Myosin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q39160]

Coordinates

chr1:+:6039250..6049685

Molecular Weight (calculated)

172918.0 Da

IEP (calculated)

8.418

GRAVY (calculated)

-0.363

Length

1520 amino acids

Sequence
(BLAST)

0001: MAAPVIIVGS HVWVEDPHLA WIDGEVTRID GINVHVKTKK GKTVVTNVYF PKDTEAPSGG VDDMTKLSYL HEPGVLRNLE TRYELNEIYT YTGNILIAVN
0101: PFQRLPHIYE TDMMEQYKGI ALGELSPHVF AIGDAAYRAM INEGKNNSIL VSGESGAGKT ETTKMLMRYL AFLGGRSGVE GRTVEQQVLE SNPVLEAFGN
0201: AKTLRNNNSS RFGKFVEIQF DKNGRISGAA IRTYLLERSR VCQISDPERN YHCFYLLCAA PPEDIKKYKL ENPHKFHYLN QSSCYKLDGV DDASEYLETR
0301: RAMDVVGISN EEQEAIFRVV AAILHLGNID FGKGEEIDSS VIKDKDSRSH LNMAAELLMC NAQSLEDALI RRVMVTPEEI ITRTLDPDNA IASRDTLAKT
0401: IYSHLFDWIV NKINTSIGQD PRSKSIIGVL DIYGFESFKC NSFEQFCINF TNEKLQQHFN QHVFKMEQEE YTKEEIAWSY IEFIDNQDVL ELIEKKPGGI
0501: ISLLDEACMF PKSTHETFSQ KLFQTFKEHE RFAKPKLSRT DFTISHYAGE VTYQSNHFID KNKDYIVAEH QALFTASNCK FVAGLFHALH EDSSRSSKFS
0601: SIGSRFKQQL HSLMESLNGT EPHYIRCIKP NNVLKPGIFE NFNVIHQLRC GGVLEAIRIS CAGYPTRLAF YDFLDRFGLL APEVLEGNYD DKVACQMILD
0701: KKSLTDYQIG KTKIFLRAGQ MAELDARRAE VLGNAARVIQ RQFRTCMARK NYRSIRNAAI VLQSFLRGEI ARAVHKKLRI EAAALRVQKN FRRYVDRKSF
0801: VTTRSSTIVL QTGLRAMIAR SEFRLRRQRK AAIVLQAHWR GRQAFSYYTR LQKAAIVTQC AWRCRLARRE LRMLKMAARD TGALKDAKNK LEQRVEELSL
0901: RLHLEKRLRT DLEEAKVQEV AKLQEALHTM RLQLKETTAM VVKEQEAARV AIEEASSVNK EPVVVEDTEK IDSLSNEIDR LKGLLSSETH KADEAQHAYQ
1001: SALVQNEELC KKLEEAGRKI DQLQDSVQRF QEKVFSLESE NKVLRQQTLT ISPTTRALAL RPKTTIIQRT PEKDTFSNGE TTQLQEPETE DRPQKSLNQK
1101: QQENQELLLK SISEDIGFSE GKPVAACLIY KCLIHWRSFE VERTSIFNRI IETIASAIEM QENSDVLCYW LSNSATLLMF LQRTLKAGAT GSITTPRRRG
1201: MPSSLFGRVS QSFRGSPQSA GFPFMTGRAI GGGLDELRQV EAKYPALLFK QQLTAFLEKI YGMIRDKMKK EISPLLASCI QVPRTPRSGL VKGRSQNTQN
1301: NVVAPKPMIA HWQNIVTCLN GHLRTMRANY VPSLLISKVF GQIFSFINVQ LFNSLLLRRE CCSFSNGEYV KTGLAELEKW CHDATEEFVG SAWDELKHIR
1401: QAVGFLVIHQ KPKKSLKEIT TELCPVLSIQ QLYRISTMYW DDKYGTHSVS TEVIATMRAE VSDVSKSAIS NSFLLDDDSS IPFSLDDISK SMQNVEVAEV
1501: DPPPLIRQNS NFMFLLERSD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.