Factsheet for AT1G04160.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032526.1-P	Field mustard	cytosol	92.27	92.02
CDY10075	Canola	endoplasmic reticulum	92.53	91.62
CDY32531	Canola	endoplasmic reticulum	91.93	91.26
AT5G43900.3	Thale cress	cytosol	86.93	83.32
Solyc09g064200.2.1	Tomato	plastid	75.8	75.1
PGSC0003DMT400056647	Potato	cytosol	75.53	74.83
VIT_07s0005g04790.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	75.07	74.18
KRG95788	Soybean	cytosol	74.73	73.9
KRH67505	Soybean	cytosol	74.47	73.88
KRH19659	Soybean	cytosol	74.73	73.8
KRH32270	Soybean	cytosol	74.2	73.51
Solyc06g008090.2.1	Tomato	cytosol	71.33	72.1
TraesCS6D01G377100.1	Wheat	cytosol	72.13	71.66
OQU85951	Sorghum	cytosol	72.53	71.53
TraesCS6A01G390800.2	Wheat	cytosol	72.0	71.52
TraesCS6B01G431400.1	Wheat	cytosol	71.93	71.46
HORVU6Hr1G091010.24	Barley	cytosol	71.8	71.28
AT4G28710.1	Thale cress	cytosol	71.93	71.17
Zm00001d018481_P033	Maize	cytosol	72.2	70.83
Os02t0816900-01	Rice	cytosol, plasma membrane	59.87	70.76
Os03t0860700-00	Rice	cytosol, plasma membrane	41.0	69.18
GSMUA_AchrUn_...	Banana	cytosol	69.47	67.66
AT2G20290.1	Thale cress	endoplasmic reticulum	65.4	65.71
KXG34975	Sorghum	cytosol	63.07	65.6
PGSC0003DMT400038143	Potato	cytosol	37.2	65.49
GSMUA_Achr3P27420_001	Banana	cytosol	72.67	65.31
Zm00001d019495_P001	Maize	cytosol	64.87	64.61
EER90459	Sorghum	cytosol	63.2	63.88
Zm00001d034927_P001	Maize	cytosol	63.53	63.79
TraesCS1D01G174000.2	Wheat	cytosol	64.13	63.75
HORVU1Hr1G044020.1	Barley	cytosol	63.93	63.55
TraesCS1A01G166900.2	Wheat	cytosol	63.93	63.51
TraesCS1B01G183200.1	Wheat	cytosol	63.8	63.38
TraesCS5D01G558600.1	Wheat	cytosol	62.13	62.63
HORVU5Hr1G125430.15	Barley	cytosol	61.27	62.43
TraesCS5B01G566200.1	Wheat	cytosol	61.8	62.34
TraesCS4A01G313500.1	Wheat	cytosol	61.8	62.34
AT1G08730.1	Thale cress	endoplasmic reticulum	62.6	61.05
AT1G54560.1	Thale cress	cytosol	62.13	60.95
AT5G20490.2	Thale cress	cytosol	62.13	60.88
AT1G17580.1	Thale cress	cytosol	59.73	58.95
AT2G31900.2	Thale cress	cytosol	59.67	57.48
AT1G04600.1	Thale cress	cytosol	64.6	56.01
AT2G33240.1	Thale cress	cytosol	63.2	53.56
GSMUA_Achr1P03340_001	Banana	cytosol	66.2	53.44
AT4G33200.4	Thale cress	cytosol	52.4	51.61
AT3G58160.1	Thale cress	cytosol	42.13	50.89
AT1G50360.1	Thale cress	cytosol	25.47	33.13
AT3G19960.2	Thale cress	cytosol, plastid	25.4	32.4
AT4G27370.2	Thale cress	cytosol	24.33	32.13
AT5G20470.1	Thale cress	endoplasmic reticulum	11.67	31.47
AT5G54280.2	Thale cress	cytosol	25.13	30.9

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.1	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	EntrezGene:839246	ProteinID:AAC16753.1	ProteinID:AEE27664.1	ArrayExpress:AT1G04160	EnsemblPlantsGene:AT1G04160
RefSeq:AT1G04160	TAIR:AT1G04160	RefSeq:AT1G04160-TAIR-G	EnsemblPlants:AT1G04160.1	TAIR:AT1G04160.1	ncoils:Coil
InterPro:Dilute_dom	UniProt:F4I460	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0007015
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459
GO:GO:0016787	GO:GO:0030048	GO:GO:0051015	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710
InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo11
InterPro:MyosinXI_CBD	InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	RefSeq:NP_171912.2	InterPro:P-loop_NTPase
PFAM:PF00063	PFAM:PF00612	PFAM:PF01843	PFAM:PF02736	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007103	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00193
PFscan:PS50096	PFscan:PS51126	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF256
SMART:SM00015	SMART:SM00242	SMART:SM01132	SUPFAM:SSF52540	UniParc:UPI000034F3EF	Symbol:XIB
SEG:seg	:	:	:	:	:

Description

XI-BMyosin-8 [Source:UniProtKB/Swiss-Prot;Acc:F4I460]

Coordinates

chr1:+:1086170..1096510

Molecular Weight (calculated)

169503.0 Da

IEP (calculated)

7.815

GRAVY (calculated)

-0.326

Length

1500 amino acids

Sequence
(BLAST)

0001: MVATFNPAVG SHVWVEDPDE AWLDGEVVEI NGDQIKVLCA SGKQVVVKDS NIYPKDVEAP ASGVEDMTRL AYLHEPGVLQ NLQSRYDINE IYTYTGSILI
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VIHQKYRVSY
1401: DDIVHDLCPI LSVQQLYRIC TLYWDDCYNT RSVSQEVISS MRALMTEESN DADSNSFLLD DNSSIPFSID EISNSMHEKD FASVKPAKEL LENPEFVFLH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.