Factsheet for GSMUA_AchrUn_randomP10860_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G04600.1	GSMUA_Achr9P09250_001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0816900-01	Rice	cytosol, plasma membrane	64.81	78.64
TraesCS6D01G377100.1	Wheat	cytosol	73.51	74.97
TraesCS6B01G431400.1	Wheat	cytosol	73.51	74.97
TraesCS6A01G390800.2	Wheat	cytosol	73.51	74.97
OQU85951	Sorghum	cytosol	74.03	74.95
HORVU6Hr1G091010.24	Barley	cytosol	73.44	74.85
VIT_00s0268g00030.t01	Wine grape	cytosol	21.36	73.93
Zm00001d018481_P033	Maize	cytosol	73.38	73.9
VIT_07s0005g04790.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	72.47	73.52
GSMUA_Achr3P27420_001	Banana	cytosol	79.48	73.34
PGSC0003DMT400056647	Potato	cytosol	71.75	72.99
Solyc09g064200.2.1	Tomato	plastid	71.69	72.92
KRH32270	Soybean	cytosol	71.1	72.33
KRH19659	Soybean	cytosol	70.97	71.96
KRH67505	Soybean	cytosol	70.45	71.76
KRG95788	Soybean	cytosol	70.19	71.26
Solyc06g008090.2.1	Tomato	cytosol	68.64	71.23
VIT_05s0051g00050.t01	Wine grape	cytosol	68.7	71.1
GSMUA_Achr7P26040_001	Banana	cytosol	24.09	69.74
AT1G04160.1	Thale cress	cytosol	67.66	69.47
CDY32922	Canola	cytosol	67.79	69.28
Bra027512.1-P	Field mustard	cytosol	55.26	69.19
Bra011053.1-P	Field mustard	cytosol	67.21	68.73
CDY64313	Canola	cytosol	67.66	68.51
Bra032526.1-P	Field mustard	cytosol	66.88	68.48
CDX94736	Canola	cytosol	67.66	68.19
CDY32531	Canola	endoplasmic reticulum	66.88	68.17
CDY10075	Canola	endoplasmic reticulum	66.82	67.92
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	67.66	67.66
AT5G43900.3	Thale cress	cytosol	68.31	67.22
AT4G28710.1	Thale cress	cytosol	66.17	67.22
PGSC0003DMT400038143	Potato	cytosol	36.69	66.31
VIT_16s0115g00220.t01	Wine grape	cytosol	11.04	63.67
AT2G20290.1	Thale cress	endoplasmic reticulum	61.49	63.43
Bra036688.1-P	Field mustard	cytosol	59.42	63.32
Bra033704.1-P	Field mustard	cytosol, plastid	67.66	62.85
CDY39766	Canola	cytosol	59.55	62.38
CDY03315	Canola	cytosol	59.55	62.34
GSMUA_Achr8P26250_001	Banana	cytosol	61.36	61.72
Solyc09g091080.2.1	Tomato	cytosol	64.42	61.01
Bra036460.1-P	Field mustard	cytosol	58.64	60.69
GSMUA_Achr4P14090_001	Banana	cytosol	61.1	60.55
GSMUA_AchrUn_...	Banana	cytosol	34.94	60.38
KRG89126	Soybean	cytosol	61.82	60.22
GSMUA_Achr5P09720_001	Banana	cytosol	60.91	60.01
CDY31978	Canola	cytosol	58.64	58.71
GSMUA_Achr1P03340_001	Banana	cytosol	70.26	58.23
CDY05734	Canola	cytosol	58.77	57.35
GSMUA_Achr4P07570_001	Banana	plastid	59.22	57.25
KRH40872	Soybean	cytosol	62.01	57.22
GSMUA_Achr3P30890_001	Banana	cytosol	59.68	57.08
AT1G04600.1	Thale cress	cytosol	62.21	55.38
CDY35211	Canola	plastid	67.14	54.25
CDY65572	Canola	plastid	66.95	54.23
CDX86626	Canola	cytosol	61.23	53.95
CDY15512	Canola	cytosol	61.23	53.73
VIT_04s0079g00370.t01	Wine grape	cytosol	14.29	53.53
Bra030576.1-P	Field mustard	cytosol	58.77	53.52
CDX84695	Canola	cytosol	59.74	53.06
CDX79520	Canola	endoplasmic reticulum	52.01	52.98
AT2G33240.1	Thale cress	cytosol	60.78	52.88
CDY19473	Canola	cytosol	60.06	52.83
CDY17154	Canola	cytosol	59.81	50.38
GSMUA_Achr7P26030_001	Banana	cytosol	38.57	49.75
GSMUA_Achr4P07150_001	Banana	cytosol, mitochondrion, nucleus, plastid	61.69	47.38
GSMUA_Achr3P07960_001	Banana	cytosol	49.42	46.52
GSMUA_Achr1P01870_001	Banana	cytosol	24.61	29.89
GSMUA_Achr2P10680_001	Banana	cytosol	23.64	28.84
GSMUA_Achr8P03790_001	Banana	cytosol	24.48	27.84

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	MapMan:20.2.4.1	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	ncoils:Coil	InterPro:Dilute_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459	GO:GO:0016787
EnsemblPlantsGene:GSMUA_AchrUn_randomG10860_001	EnsemblPlants:GSMUA_AchrUn_randomP10860_001	EnsemblPlants:GSMUA_AchrUn_randomT10860_001	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710
InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	UniProt:M0U845	InterPro:MYSc_Myo11	InterPro:MyosinXI_CBD
InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PFAM:PF01843	PRINTS:PR00193
PFscan:PS50096	PFscan:PS51126	PFscan:PS51456	PANTHER:PTHR13140	PANTHER:PTHR13140:SF256	SMART:SM00015
SMART:SM00242	SMART:SM01132	SUPFAM:SSF52540	UniParc:UPI000295609B	SEG:seg	:

Description

Myosin head domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG10860_001]

Coordinates

chrchrUn_random:-:52610184..52630239

Molecular Weight (calculated)

175556.0 Da

IEP (calculated)

8.336

GRAVY (calculated)

-0.359

Length

1540 amino acids

Sequence
(BLAST)

0001: MTKLAYLHEP GVLQNLRSRY DMNEIYTYTG NILIAVNPFR RLPHLYDSHM MEQYKGAVFG ELSPHPFAVA DAAYRQMINE GVSQSILVSG ESGAGKTEST
0101: KMLMRYLAYM GGRVASEGRT VEQQVLQVKY LPSNPVLEAF GNAKTVRNNN SSRFGKFVEI QFDQSGRISG AAIRTYLLER SRVCQVSDPE RNYHCFYMLC
0201: AAPPERRGDR GIGNTLGGNP YEDGEGIQPT YDKIWVLASA TCSTSICNLQ LDKCRTLRLF SLVQLMSFRS SCSNWNSHIG RFKLGSPRTF HYLNQSKCYE
0301: LDGVDDAKEY LETKNAMDII GITADEQDAI FRVVAAILHL GNVEFADGKE IDSSQPKDEK SWFHLRTAAE LLMCDVNALE DSLCTRVIVT RDENIVKTLD
0401: LAAAVLSRDA LAKIIYSRLF DWLVNKINNS IGQDPDSKNL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYTKEEI DWSYIEFVDN
0501: QDILDLIEKK PGGIIALLDE ACMLPRSTHE TFAQKLYQSF KNNKRFSKPK LSRSDFIISH YAGDVTYQTE FFLDKNKDYV VAEHQALLTA SKCSFVSSLF
0601: PPLSEDASKS SKFSSIGARF KQQLQALLET LSATEPHYIR CVKPNNLLKP AIYENHNVLQ QLRCGGVMEA IRISCAGYPT RRTFDEFIDR FGILAPEVFD
0701: GSCDEVAVSK KLLGKVNLKG YQIGKTKVFL RAGQMAELDA LRNEVLGRSA NLIQRKVRSY LSRRSFILLK KSAIMIQTIC RGQHARQIYE IKRKEAAALR
0801: IQTYFRVHFA RKTYKELLYS SITIQAGLRG MTARKELRFR QQTKAATIIQ TNFSSFFYLF IVSFSRCRQY LACLHYSRMK KAAITTQCSW RGRVARSELR
0901: KLKMAARETG ALQAAKNKLE KQVEELTWRL QLEKRIRADM EEAKTQENAK LQAALQEMQQ KFDETKALLV KEQEAAKQAA EQVPVVKEIP VIDTVLMDKL
1001: RDENEKLKAL VSSLEMKIDE SEKKYEETSR ISEERLKKAT EAESKIVNLN SAIERLQEKL SNLESEDQIL RQQAMLHSPI KRMSEHLSIP VTPTNQNLEN
1101: GHHDFQEPKE VQSAPPAVND YANGGTKLNR PSIERQQVYE DVDALINCVS KNIGFSEGKP VSAFTIYKCL IHWKSFEAEK TSVFDHLIQM IGSAIEDEHD
1201: NDHLAYWLSN GSTLLFLLQR SLKVAGAVGS TAQRKPPAPT SFFGRMTQSF RSSSSVSLAV DGLSVVRQVE AKYPALLFKQ QLTAYVEKIY GIIRDNVKKD
1301: LSSLLSLCIQ APRTTRASML RGVGRSPRQT QGNHWQNIIE RLDNLLKTMQ ENYVPLVLIQ KMYTQIFSFI NVQVFNSLLL RRECCSFSNG EYVKSGLGEL
1401: ELWCTKTKPQ YTGLSWDELK HIRQAVGFLV IFQKYRISYD EIVNDLCPVL SVQQLYRICI QYWDDKYNTK SVSADVLSNM RVLMTQDSND AESSAFLLDD
1501: NSSIPFSVDD LLSSLQEKEF MHVRSAEELM ENPAFQFLQE

Best Arabidopsis Sequence Match ( AT1G04160.1 )
(BLAST)

0001: MVATFNPAVG SHVWVEDPDE AWLDGEVVEI NGDQIKVLCA SGKQVVVKDS NIYPKDVEAP ASGVEDMTRL AYLHEPGVLQ NLQSRYDINE IYTYTGSILI
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VIHQKYRVSY
1401: DDIVHDLCPI LSVQQLYRIC TLYWDDCYNT RSVSQEVISS MRALMTEESN DADSNSFLLD DNSSIPFSID EISNSMHEKD FASVKPAKEL LENPEFVFLH

Arabidopsis Description

XI-BMyosin-8 [Source:UniProtKB/Swiss-Prot;Acc:F4I460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.