Factsheet for GSMUA_AchrUn_randomP01910_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P05380_001
GSMUA_Achr1P14210_001
GSMUA_Achr2P12800_001
GSMUA_Achr3P15020_001
GSMUA_Achr4P17820_001
GSMUA_Achr4P22730_001
GSMUA_Achr5P09720_001
GSMUA_Achr7P01610_001
GSMUA_Achr8P04680_001
GSMUA_Achr8P26250_001
GSMUA_Achr8P26680_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17580.1	GSMUA_Achr1P05380_001	AT1G08800.1	23995081
AT1G17580.1	GSMUA_Achr4P17820_001	AT1G08800.1	23995081
AT1G17580.1	GSMUA_Achr7P01610_001	AT1G08800.1	23995081
AT1G17580.1	GSMUA_AchrUn_...	AT1G08800.1	23995081
AT1G17580.1	GSMUA_Achr5P09720_001	AT1G17580.1	18429938
AT1G17580.1	GSMUA_Achr8P26250_001	AT1G17580.1	18429938
AT1G17580.1	GSMUA_AchrUn_...	AT1G17580.1	18429938
AT1G17580.1	GSMUA_Achr1P14210_001	AT5G06560.1	23995081
AT1G17580.1	GSMUA_Achr2P12800_001	AT5G06560.1	23995081
AT1G17580.1	GSMUA_Achr3P15020_001	AT5G06560.1	23995081
AT1G17580.1	GSMUA_Achr4P22730_001	AT5G06560.1	23995081
AT1G17580.1	GSMUA_Achr8P04680_001	AT5G06560.1	23995081
AT1G17580.1	GSMUA_Achr8P26680_001	AT5G06560.1	23995081

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0713900-01	Rice	cytosol	29.18	69.89
GSMUA_Achr7P26040_001	Banana	cytosol	41.64	69.74
Zm00001d038844_P001	Maize	cytosol	48.26	68.25
Os05t0537200-01	Rice	cytosol, plasma membrane	28.4	68.01
GSMUA_Achr8P26250_001	Banana	cytosol	81.48	47.42
GSMUA_Achr5P09720_001	Banana	cytosol	78.23	44.59
Solyc07g041150.2.1	Tomato	nucleus	74.75	43.56
KRH19248	Soybean	cytosol	74.75	43.53
KRH02661	Soybean	cytosol	74.75	43.53
PGSC0003DMT400053991	Potato	cytosol	74.07	43.17
VIT_09s0002g01910.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	75.42	43.13
VIT_11s0016g01710.t01	Wine grape	cytosol	72.73	42.66
AT5G20490.2	Thale cress	cytosol	73.29	42.65
Bra020105.1-P	Field mustard	cytosol	72.95	42.57
CDY66597	Canola	cytosol	72.5	42.44
Zm00001d044303_P003	Maize	plasma membrane	72.61	42.32
EES03165	Sorghum	cytosol	72.5	42.25
Bra006561.1-P	Field mustard	cytosol	72.73	42.16
Os03t0686300-00	Rice	plasma membrane	72.84	41.95
CDY45087	Canola	cytosol	72.84	41.9
CDX81833	Canola	cytosol	68.69	41.77
CDX70927	Canola	cytosol	72.84	41.71
HORVU3Hr1G050290.1	Barley	cytosol	71.38	41.6
TraesCS3A01G209500.1	Wheat	cytosol	70.93	41.47
TraesCS3D01G212400.3	Wheat	cytosol	71.04	41.4
TraesCS3B01G239700.1	Wheat	cytosol, golgi	70.82	41.27
CDY51846	Canola	cytosol	72.61	40.92
Bra030993.1-P	Field mustard	cytosol	68.8	40.6
AT1G17580.1	Thale cress	cytosol	69.14	40.53
CDY21744	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.8	40.44
GSMUA_Achr4P14090_001	Banana	cytosol	67.0	38.42
GSMUA_Achr3P30890_001	Banana	cytosol	65.43	36.21
GSMUA_Achr4P07570_001	Banana	plastid	63.52	35.53
GSMUA_AchrUn_...	Banana	cytosol	60.38	34.94
GSMUA_Achr3P27420_001	Banana	cytosol	64.31	34.33
GSMUA_Achr4P07150_001	Banana	cytosol, mitochondrion, nucleus, plastid	70.71	31.42
GSMUA_Achr3P07960_001	Banana	cytosol	53.98	29.4
Zm00001d043667_P003	Maize	endoplasmic reticulum	65.32	29.11
GSMUA_Achr1P03340_001	Banana	cytosol	57.91	27.77
OQU78360	Sorghum	cytosol	64.76	26.84
HORVU1Hr1G080240.9	Barley	cytosol	64.53	26.78
TraesCS1B01G375000.1	Wheat	cytosol	64.09	26.66
TraesCS1D01G363400.1	Wheat	cytosol	63.97	26.52
TraesCS1A01G358500.1	Wheat	cytosol	59.71	25.54
GSMUA_Achr1P01870_001	Banana	cytosol	35.91	25.24
GSMUA_Achr2P10680_001	Banana	cytosol	35.58	25.12
OQU87414	Sorghum	cytosol	66.67	24.88
TraesCS3A01G248800.7	Wheat	cytosol	66.67	24.84
TraesCS3D01G248700.2	Wheat	cytosol	66.44	24.82
TraesCS3B01G277500.1	Wheat	cytosol	66.33	24.75
Zm00001d011713_P003	Maize	endoplasmic reticulum	62.07	23.38
GSMUA_Achr8P03790_001	Banana	cytosol	35.24	23.19
GSMUA_Achr7P26030_001	Banana	cytosol	28.17	21.02
HORVU3Hr1G067400.2	Barley	cytosol	24.69	11.72
Zm00001d038845_P002	Maize	nucleus	15.6	9.83
Os05t0537300-01	Rice	cytosol, mitochondrion, peroxisome	0.67	1.67

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:3.30.70.3240	Gene3D:3.40.850.10
MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016459	GO:GO:0016787	EnsemblPlantsGene:GSMUA_AchrUn_randomG01910_001	EnsemblPlants:GSMUA_AchrUn_randomP01910_001	EnsemblPlants:GSMUA_AchrUn_randomT01910_001	InterPro:IPR000048
InterPro:IPR001609	InterPro:IPR004009	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	UniProt:M0U5K3
InterPro:MYSc_Myo11	InterPro:Myosin_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612
PFAM:PF02736	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140
PANTHER:PTHR13140:SF510	SMART:SM00015	SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI0002969972	SEG:seg

Description

Putative Myosin-J heavy chain [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01910_001]

Coordinates

chrchrUn_random:-:8778889..8791739

Molecular Weight (calculated)

101346.0 Da

IEP (calculated)

7.514

GRAVY (calculated)

-0.207

Length

891 amino acids

Sequence
(BLAST)

001: MVGAPIPWTK LVSLDNIIVG SHVWVEDPVL AWVDGEVFKI NGNEVHAHTT NGKTFPESSH MQVVANMSKV FPKDTEAPPA GVDDMTKLSY LHEPGVLQNL
101: ATRYELNEIY TYTGNILIAV NPFQRLPHLY DTHIMEQYKG ADFGELSPHV FAVADVAYRA MINEGKSNSI LVSGESGAGK TETTKMLMRY LAYLGGRSGI
201: EGRTVEQQVL EVRYDKFSFP EFDNYRLSNP VLEAFGNAKT VRNNNSRSRV CQINDPERNY HCFYLLCAAP HEVYSMHTLP LFGMAYLGNP QSFHYLNQSK
301: CFKLDGVDEA QEYLATRRAM DIVGISEQEQ EAIFRVVAAI LHIGNIDFVK GPEIDSSVIK DEKSRFHLDM AAELLMCNVK GLENALIKRV MVTPEEVITR
401: TLDPASAIVS RDGLAKTLYS HLFDWLVEKI NISIGQDPTS KSLIGVLDIY GFESFKCNSF EQLCINFTNE KLQQHFNQHV FKMEQEEYTK EEINWSYIEF
501: VDNQDVLDLI EKVSELEETM VCIRLTVVYG GEKMVHINII DGWKLLVSLV YSIKQQEVDP STGGFSYMKP GGIIALLDEA CMFPRSTHET FAQKLYQTLK
601: NNKRFIKPKL SRTIFTFCHY AGEVTYQADY FLDKNKDYVV AEHQDLLNAS NCPFVSGLFP PLPEETSKSS KFSSIGSCFK LQLQSLMETL NSTQPHYIRC
701: VKPNNVLKPS IFENFNVIQQ LRCGVRVLEA IRISCAGYPT RRTFYEFLLR FSLLAPEVLE GNFDDKAACQ KILDKIGLKG YQLGKSKVFL RAGQMAELDA
801: RRAEFLRLRQ ASVYLQSLWR GRLACKLYEC IRREAAAVKI QKNLRRYFAR KSYTALRMSA ITLQTGSRAM IARNDFRLRK QTKASICIQV P

Best Arabidopsis Sequence Match ( AT1G08730.1 )
(BLAST)

0001: MVRECFTFLN IFVLHSIGSH VWFEDPEVAW IDGEVEKING QEVVIQATTG KKVTAKLSKI YPKDVEAPAG GVDDMTKLSY LHEPGVLQNL KIRYELNEIY
0101: TYTGNILIAI NPFQRLPHIY DAHMMQQYKG APLGELSPHV FAVADVAYRA MINEGKSNSI LVSGESGAGK TETTKMLMRY LAYLGGRAVT EGRTVEQQVL
0201: ESNPVLEAFG NAKTVRNNNS SRFGKFVEIQ FDKQGRISGA AIRTYLLERS RVCQISDPER NYHCFYLLCA APQEEIEKYK LGHPKTFHYL NQSKCFELVG
0301: ISDAHDYLAT RRAMDIVGIS EKEQEAIFRV VAAILHIGNI DFTKGKEVDS SVPKDEKSKF HLKTAAELLM CDLKALEDAL CKRVMITPEE VIKRSLDPQS
0401: AVTSRDGLAK TVYSRLFDWL VDKINKSIGQ DANSRSLIGV LDIYGFESFK TNSFEQFCIN FTNEKLQQHF NQHVFKMEQE EYTKEAIDWS YIEFVDNQDV
0501: LDLIEKKPGG IVALLDEACM FPKSTHETFA NKLYQTFKTH KRFIKPKLSR TDFAVAHYAG EVLYQSELFL DKNKDYVIPE HQDLLGASKC PFVVGLFPPL
0601: PEETSKSSKF SSIGSRFKLQ LQQLMETLNC TEPHYIRCVK PNNLLKPAIF ENVNIMQQLR CGGVLEAIRI SCAGYPTRKP FFEFINRFGL LSPAALEGNF
0701: DEKVACQKIL DNMGLKGYQI GKTKVFLRAG QMAELDARRA EVLSSAAKKI QRRIRTHQAQ KRFIVLRKAT ISLQAICRGR LSCKHYDNLR REAAAVKIQK
0801: NGRRHYSRKS YKKLHVASLV VQTGLRAMAA RKQFRFRKQT KAATIVQAQW RCHRAISYYK KLKNGVVLSQ TRWRGRLAKR ELRKLKMAAR ETGALKEAKD
0901: MLEKKVEELT YRVQLEKRSR GDLEEAKTQE ILKLKSSFEE MRKKVDETNA LLLKEREAAK KAAEEAPPVI KETQILVEDT KKIELMTEEL ESVKVTLENE
1001: KQRADDAVRK FEEAQESLED KKKKLEETEK KGQQLQESLT RMEEKCSNLE SENKVLRQQA VSMAPNKFLS GRSRSILQRG SESGHLAVDA RSNLDLHSHS
1101: INHRDPSEVE DKPQKSLNEK QQENQDLLIR SIVQHLGFQG NRPITACIIY KCLLQWRSFE VERTSVFDRI IQTIGHAIET QDNNNTLAYW LSNTSTLLLL
1201: LQRTLKASGA AGMAPQRRRS SSATLFGRMS QSFRGAPPGV NLAMINGAAG GGADTFRQVE AKYPALLFKQ QLTAYVEKIY GMIRDNLKKE ISPLLGLCIQ
1301: APRTSRASLV KGASRSVGNT AAQQALIAHW QGIVKSLTNF LNTLKSNNVP SFLVRKVFTQ IFSFINVQLF NSLLLRRECC SFSNGEYVKA GLSELEHWCF
1401: KATNEYAGSS WDELKHIRQA IGFLVVHQKP KKTLDEISHD LCPVLSIQQL YRISTMYWDD KYGTHSVSPD VIANMRVLMT EDSNNAVSNS FLLDDDSSIP
1501: FSVDDLSKSM EKFEIADIEP PPLIRENSGF SFLLPVSE

Arabidopsis Description

XI-CMyosin-9 [Source:UniProtKB/Swiss-Prot;Acc:F4HXP9]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.