Factsheet for Solyc02g063080.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G035340.2	Barley	cytosol, mitochondrion, nucleus	38.24	56.52
KRH41779	Soybean	cytosol, mitochondrion, nucleus	51.47	51.47
Solyc01g007300.1.1	Tomato	nucleus	70.59	21.33
Solyc11g070030.1.1	Tomato	plastid	38.24	12.21
Solyc06g036210.1.1	Tomato	mitochondrion	19.12	11.21

Protein Annotations

EnsemblPlants:Solyc02g063080.1.1	EnsemblPlantsGene:Solyc02g063080.1	Gene3D:3.40.50.12280	GO:GO:0003674	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0051536	GO:GO:0055114	InterPro:NADH_UbQ_OxRdtase-like_20kDa	PANTHER:PTHR11995	PANTHER:PTHR11995:SF21
PFAM:PF01058	SUPFAM:SSF56770	UniParc:UPI0002768473	UniProt:K4B6J5	MapMan:35.1	:

Description

No Description!

Coordinates

chr2:-:35136276..35136482

Molecular Weight (calculated)

7509.2 Da

IEP (calculated)

9.441

GRAVY (calculated)

-0.059

Length

68 amino acids

Sequence
(BLAST)

1: MPGPKYVIAM GVCTITSGMF STDSYSTVRG VDKLIPVYLS GCPPKSEAII YTITKNKYSD NILHYRSK

Best Arabidopsis Sequence Match ( ATCG00430.1 )
(BLAST)

001: MNSIKFPILD RTTKNSVIST TLNDLSNWSR LSSLWPLLYG TSCCFIEFAS LIGSRFDFDR YGLVPRSSPR QADLILTAGT VTMKMAPSLV RLYEQMPEPK
101: YVIAMGACTI TGGMFSTDSY STVRGVDKLI PVDVYLPGCP PKPEAVIDAI TKLRKKIARE IYKDRIRPQQ GNRCFTTNHK FFVVRSPHIG NYDQELLYPP
201: SSTSEISTET FFKYKSPVSS HELVN

Arabidopsis Description

NDHKNAD(P)H-quinone oxidoreductase subunit K, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4U5]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.