Factsheet for Solyc04g014270.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060752	Potato	cytosol, plastid	96.81	96.09
Solyc11g010450.1.1	Tomato	plastid	85.55	85.71
CDY52512	Canola	mitochondrion	73.55	77.93
KRG99447	Soybean	nucleus, plastid	77.86	77.72
Bra010637.1-P	Field mustard	mitochondrion, plastid	73.17	77.53
AT2G22480.1	Thale cress	plastid	77.67	77.09
CDX90382	Canola	plastid	73.92	76.95
KRH45569	Soybean	plastid	76.55	76.69
CDX76918	Canola	plastid	77.11	76.25
CDY13756	Canola	plastid	76.74	75.88
VIT_00s0199g00240.t01	Wine grape	cytosol	66.23	74.95
GSMUA_Achr1P12300_001	Banana	cytosol	60.04	74.07
Bra038519.1-P	Field mustard	plastid	77.11	73.79
VIT_00s0199g00220.t01	Wine grape	plastid	72.23	73.75
KRH74511	Soybean	plastid	75.05	72.2
GSMUA_Achr1P21680_001	Banana	cytosol	64.73	71.73
GSMUA_Achr7P11550_001	Banana	mitochondrion	66.23	69.76
HORVU5Hr1G024340.24	Barley	mitochondrion	60.41	68.95
Bra030394.1-P	Field mustard	cytosol, plastid	51.03	67.49
TraesCS5B01G225200.2	Wheat	plastid	66.79	67.17
Os09t0415800-01	Rice	plastid	65.85	66.6
TraesCS5D01G234000.1	Wheat	plastid	66.04	66.54
TraesCS5A01G226600.2	Wheat	plastid	66.04	66.42
TraesCS5D01G104900.1	Wheat	plastid	65.48	66.35
TraesCS5A01G092600.1	Wheat	plastid	65.48	66.35
EER91637	Sorghum	cytosol, plastid	64.92	66.03
TraesCS5B01G098700.1	Wheat	plastid	64.17	66.02
EER98900	Sorghum	plastid	65.48	65.97
Zm00001d032172_P002	Maize	plastid	65.1	65.84
Os10t0405600-01	Rice	plastid	64.73	65.84
HORVU5Hr1G065650.11	Barley	plastid	65.85	65.49
Zm00001d033002_P001	Maize	extracellular	64.35	65.33
TraesCS7D01G083200.1	Wheat	plastid	63.6	64.08
TraesCS7A01G088100.1	Wheat	plastid	63.41	63.89
TraesCS4A01G387000.2	Wheat	plastid	63.79	63.55
Zm00001d005756_P002	Maize	plastid	65.67	61.73
KXG25278	Sorghum	plastid	64.54	61.65
KRH69652	Soybean	plastid	43.9	57.64
HORVU7Hr1G019810.6	Barley	mitochondrion, plastid	31.71	50.0
Solyc12g095880.1.1	Tomato	cytosol	40.9	44.95
Solyc07g045160.2.1	Tomato	cytosol	40.71	44.29
Os08t0439000-01	Rice	cytosol	22.7	43.84
Solyc08g066100.2.1	Tomato	cytosol	40.34	43.0
Solyc04g015200.2.1	Tomato	plastid	36.02	42.11
Solyc03g093520.2.1	Tomato	plastid	41.65	41.19
Solyc04g072580.1.1	Tomato	cytosol	38.46	41.08

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	MapMan:3.12.1
Gene3D:3.40.50.450	InterPro:ATP_PFK	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0006002	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0046872	GO:GO:0061615	UniProt:K4BPT1	HAMAP:MF_01981	PFAM:PF00365
PIRSF:PIRSF000534	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR13697	PANTHER:PTHR13697:SF35	InterPro:Phosphofructokinase_dom
InterPro:PyroP-dep_PFK_TP0108	SUPFAM:SSF53784	EnsemblPlantsGene:Solyc04g014270.2	EnsemblPlants:Solyc04g014270.2.1	UniParc:UPI0002766413	SEG:seg

Description

ATP-dependent 6-phosphofructokinase [Source:UniProtKB/TrEMBL;Acc:K4BPT1]

Coordinates

chr4:+:4578308..4586276

Molecular Weight (calculated)

58463.3 Da

IEP (calculated)

8.352

GRAVY (calculated)

-0.133

Length

533 amino acids

Sequence
(BLAST)

001: MESLSPAIGQ KAIFPSTTGY TDHDLFLDSV KVRTERNFNR ACRRLRIRVQ PKNAAAGVGG IDFSDPDWKL KYSREFEARF NIPHMTDVFP DAVSYPSTFC
101: LKMRTPITEK FAEGYPSDEK WHGYINNNDR VLLKVINYSS PTSAGAECID SNCSWVEQWV HRAGPREKIF FKPEEVKAAI VTCGGLCPGL NDVIRQIVIT
201: LEIYGVKKIV GIPFGYRGFS EKGLAEMPLS RKVVQNVHLS GGSLLGVSRG GPKVSDIVDS IQERGINMLF VLGGNGTHAG ANAIHDECRK RRIKAAVVGV
301: PKTIDNDIML MDKTFGFDTA VEEAQRAINS AYIEAHSAYR GIGIVKLMGR SSGFIAMQAS LASGQIDICL IPEVPFNLHG PHGVLRHLKY LLETKGSAVV
401: CAAEGAGQDF LEKTNAKDAS GNAVLGDIGV YLQQEVKKYF KELGQTADVK YIDPTYMIRA CRANASDGIL CTVLGQNAVH GAFAGYSGIT VGICNTHYVY
501: FPIPEVISKP RVVDPNSRMW HRCLTSTGQP DFL

Best Arabidopsis Sequence Match ( AT2G22480.1 )
(BLAST)

001: MDALSQAISS GISVPYKNNS SSLVPSHGLT SLILRKSRSP VNPSSRSRVS VRASEIQHSK TSASSIDLSD PDWKLKYEKD FEQRFSIPHI TDVLPDAEAI
101: RSTFCLKMRS PTEDFVGGYP SDEEWHGYIN NNDRVLLKVI SYSSPTSAGA ECLDHDCSWV EQWIHRAGPR EKIYFRPEEV KAAIITCGGL CPGLNDVIRH
201: IVITLEIYGV KNIVGIPFGY RGFSDKDLTE MPLSRKVVQN IHLSGGSLLG VSRGGPSVSE IVDSMEERGI NMLFVLGGNG THAGANAIHN ECRKRKIKVA
301: VVGVPKTIDN DILHMDKTFG FDTAVEEAQR AINSAYIEAH SAYHGIGVVK LMGRNSGFIA MQASLASGQV DICLIPEVPF NLHGPNGVLK HLKYLIETKG
401: SAVICVAEGA GQNFLEKTNA KDASGNAVLG DFGVYIQQET KKYFKEISTP IDVKYIDPTY MIRAVRANAS DGILCTVLGQ NAVHGAFAGY SGITVGIINT
501: HYAYLPITEV IAYPKSVDPN SRMWHRCLTS TGQPDFI

Arabidopsis Description

PFK5ATP-dependent 6-phosphofructokinase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VYN6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.