Factsheet for Solyc05g015350.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

cytosol 1
nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074847	Potato	mitochondrion	82.03	96.11
VIT_01s0010g03560.t01	Wine grape	endoplasmic reticulum	67.77	67.25
KRH58768	Soybean	endoplasmic reticulum, extracellular	63.87	64.37
KRH42668	Soybean	endoplasmic reticulum, extracellular	63.87	63.62
KRH31476	Soybean	endoplasmic reticulum, extracellular, plastid	61.91	60.73
GSMUA_Achr6P20670_001	Banana	endoplasmic reticulum	41.02	54.83
Solyc03g114940.2.1	Tomato	endoplasmic reticulum	53.91	53.49
EES08485	Sorghum	endoplasmic reticulum	49.02	46.57
Solyc10g009310.2.1	Tomato	endoplasmic reticulum, plasma membrane	47.07	45.9
Os11t0489250-00	Rice	endoplasmic reticulum	47.85	45.54
Solyc01g096280.1.1	Tomato	endoplasmic reticulum, golgi	47.46	45.17
Solyc12g056810.1.1	Tomato	endoplasmic reticulum	46.48	44.4
Solyc05g047680.2.1	Tomato	endoplasmic reticulum, golgi	45.51	43.88

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016491	GO:GO:0016705
GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:K4BYQ1	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086
PANTHER:PTHR24298	PANTHER:PTHR24298:SF79	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc05g015350.2	EnsemblPlants:Solyc05g015350.2.1	TMHMM:TMhelix
UniParc:UPI0002766A7F	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5:+:10425776..10430016

Molecular Weight (calculated)

58750.9 Da

IEP (calculated)

9.239

GRAVY (calculated)

-0.027

Length

512 amino acids

Sequence
(BLAST)

001: MKLFMLALFI LVISYYAYPW PFTLATLLFS LLLNFLLNYW LVPGGFAWRN YTYYHRNPNK LHGPFSWPFL GFLPQMGSCA HRKLAKIASS LGSTRLMTIS
101: LGATQVIISS HPDTAKEILW SASFSSRPLK ESTKLLMFER AIGFAPYGSY WRNLRRIATN HMFSPRRISC FESLRQLIAD KMIGEVVKEM NESGFIEIRG
201: LLRQGSLSNI LESVFGSSLG LEGERLGLMV KEGYELIGEF NWSDYFPLDF WGTKRRCYKL GAQVNEVVGE IMKKRRREGE LVNMKNDFLS VLLSLAKEDQ
301: LKDEDMVAIL WEMVFRGTDT IAILVEWILA RTILHQDVQE KAQEEIDTCV GQNRNVQDSD IQNLPYLQAI VKEVLRLHPP GPLLSWARLA MHDTYIDKCF
401: IPAGTTAMVN MWAITHDPTI WEDSWAFKPE RFINKEDFSI MGSDLRLAPF GSGRRVCPGR VLGLATVHLW LARLLQRFKW LPNKPVDLSE CLKLSLEMKK
501: PLACRALNRS SI

Best Arabidopsis Sequence Match ( AT1G74110.1 )
(BLAST)

001: MTIDMYLSFA SRSGSSPFPS LELCLSIFLF ISLFVFWLTP GGFAWALYKA RFHTRPESKT GPAIPGPSGL PIFGLLLAFV NNALTHRILA NIADTCKAKA
101: LMAFSVGSTR FVITSEPETA KELLNSSAFA DRPVKESAYE LLFDRAMGFA PFGDYWRELR RISSTHLFSP KRIFSSGESR RKIGQNMVGE IKNAMECYGE
201: VHIKKILHFG SLNNVMSSVF GKTYNFNEGI VYSKESNELE HLVSEGYELL GIFNWSDHFP GMRWLDLQGV RRRCRSLVGR VNVFVGKIIN DHKSKRSLRD
301: NPEESTYDDD FVDVLLGMHG NSKLSDSDMI AVLWEMIFRG TDTVAILLEW ILARMVLHPD IQAKAQAEID CIVGDSGRQV TDSDLPKLPY VRAIVKETLR
401: MHPPGPLLSW ARLSIHDTQI GTHFIPAGTT AMVNMWAITH DEKVWPEAHE YKPERFLGAQ ESNNFPIMGS DLRLAPFGAG RRVCPGKSMG LATVELWLAQ
501: LLGSYKWVSC GEVDLSETLK LSLEMKNTLV CKAIPRG

Arabidopsis Description

CYP78A10Cytochrome P450 family protein [Source:UniProtKB/TrEMBL;Acc:Q9C9D1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.