Factsheet for VIT_01s0010g03560.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
plastid 3
endoplasmic reticulum 6
extracellular 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074847	Potato	mitochondrion	60.47	71.4
KRH42668	Soybean	endoplasmic reticulum, extracellular	67.64	67.9
Solyc05g015350.2.1	Tomato	golgi, plasma membrane	67.25	67.77
KRH58768	Soybean	endoplasmic reticulum, extracellular	65.89	66.93
KRH31476	Soybean	endoplasmic reticulum, extracellular, plastid	64.73	63.98
GSMUA_Achr6P20670_001	Banana	endoplasmic reticulum	44.57	60.05
VIT_01s0011g00350.t01	Wine grape	endoplasmic reticulum, plasma membrane	54.65	54.44
VIT_17s0000g05110.t01	Wine grape	endoplasmic reticulum, plasma membrane	54.26	53.33
EES08485	Sorghum	endoplasmic reticulum	52.13	49.91
Os11t0489250-00	Rice	endoplasmic reticulum	51.74	49.63
VIT_02s0025g02570.t01	Wine grape	endoplasmic reticulum, golgi	49.22	48.29
VIT_07s0031g01570.t01	Wine grape	extracellular, plasma membrane	49.03	46.94
VIT_15s0048g02900.t01	Wine grape	endoplasmic reticulum, plasma membrane	48.45	46.9
VIT_18s0001g00590.t01	Wine grape	endoplasmic reticulum, plasma membrane	48.45	46.3

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100257370	wikigene:100257370	MapMan:50.1.13	EMBL:AM456971	ProteinID:CAN70074
ProteinID:CAN70074.1	ProteinID:CCB51297	ProteinID:CCB51297.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	UniProt:F6HGA4	EMBL:FN595754	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748
GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100257370
wikigene:LOC100257370	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298
PANTHER:PTHR24298:SF79	SUPFAM:SSF48264	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000210A430	ArrayExpress:VIT_01s0010g03560
EnsemblPlantsGene:VIT_01s0010g03560	EnsemblPlants:VIT_01s0010g03560.t01	unigene:Vvi.23394	RefSeq:XP_002271641	RefSeq:XP_002271641.2	SEG:seg

Description

No Description!

Coordinates

chr1:+:20910124..20913498

Molecular Weight (calculated)

57219.5 Da

IEP (calculated)

9.536

GRAVY (calculated)

0.169

Length

516 amino acids

Sequence
(BLAST)

001: MKSFISAILS LSPLCFAATH QASWPLLLLL FSVSSLIFTL FLNFWLVPGG FAWRNHHGKY SSKLSGPIGW PLLGSLPLMG SLAHRKLATM AASCGATRLM
101: ALSLGVTPVI ISSHPDTAKE ILCGSSFSNR PVKASARLLM FERAIGFAPS GDYWRHLRRI AANYMFSPKR ISGSEAVRLR VADEMVVGVR KEMEERSVVK
201: LRGILQKGSL SNIMESVFGR GLGSVEGEGL GFMVIEGYEL IAKFNWEDYF PLGFIDFYGV KRRCSKLAAK VNGVVGKMIE ERKRVGELSG GGNDFLSVLL
301: SLPKEDQLSD SDMVAVLWEM IFRGTDTVAI LLEWIMARMV IHQDIQAKAQ EELDTCLGNQ SHVQDSHIQS LPYLQAIVKE ALRMHPPGPL LSWARLAIHD
401: VHVGKFFVPA GTTAMVNMWA IAHDPTIWKD PWAFKPDRFI NEDVSIMGSD LRLAPFGSGR RACPGKALGL ATVHLWLARL LHQFKWLPTH PVDLGECLRL
501: SLEMKKPLIC CAIPRV

Best Arabidopsis Sequence Match ( AT1G74110.1 )
(BLAST)

001: MTIDMYLSFA SRSGSSPFPS LELCLSIFLF ISLFVFWLTP GGFAWALYKA RFHTRPESKT GPAIPGPSGL PIFGLLLAFV NNALTHRILA NIADTCKAKA
101: LMAFSVGSTR FVITSEPETA KELLNSSAFA DRPVKESAYE LLFDRAMGFA PFGDYWRELR RISSTHLFSP KRIFSSGESR RKIGQNMVGE IKNAMECYGE
201: VHIKKILHFG SLNNVMSSVF GKTYNFNEGI VYSKESNELE HLVSEGYELL GIFNWSDHFP GMRWLDLQGV RRRCRSLVGR VNVFVGKIIN DHKSKRSLRD
301: NPEESTYDDD FVDVLLGMHG NSKLSDSDMI AVLWEMIFRG TDTVAILLEW ILARMVLHPD IQAKAQAEID CIVGDSGRQV TDSDLPKLPY VRAIVKETLR
401: MHPPGPLLSW ARLSIHDTQI GTHFIPAGTT AMVNMWAITH DEKVWPEAHE YKPERFLGAQ ESNNFPIMGS DLRLAPFGAG RRVCPGKSMG LATVELWLAQ
501: LLGSYKWVSC GEVDLSETLK LSLEMKNTLV CKAIPRG

Arabidopsis Description

CYP78A10Cytochrome P450 family protein [Source:UniProtKB/TrEMBL;Acc:Q9C9D1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.