Factsheet for VIT_18s0001g00590.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

cytosol 1
nucleus 1
endoplasmic reticulum 4
extracellular 2
vacuole 2
plasma membrane 3
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0031g01570.t01	Wine grape	extracellular, plasma membrane	75.93	76.07
Solyc12g056810.1.1	Tomato	endoplasmic reticulum	69.26	69.78
PGSC0003DMT400043673	Potato	endoplasmic reticulum	68.7	69.09
GSMUA_AchrUn_...	Banana	cytosol	27.59	67.42
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	50.37	63.85
Zm00001d033020_P001	Maize	endoplasmic reticulum	62.59	61.68
EER91649	Sorghum	endoplasmic reticulum, plasma membrane	62.78	61.41
KRG91754	Soybean	peroxisome	36.3	60.12
Os10t0403000-01	Rice	endoplasmic reticulum, plasma membrane	61.67	60.0
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	37.41	58.21
VIT_01s0011g00350.t01	Wine grape	endoplasmic reticulum, plasma membrane	47.59	49.61
VIT_01s0010g03560.t01	Wine grape	endoplasmic reticulum	46.3	48.45
VIT_17s0000g05110.t01	Wine grape	endoplasmic reticulum, plasma membrane	46.3	47.62
VIT_15s0048g02900.t01	Wine grape	endoplasmic reticulum, plasma membrane	46.85	47.47
VIT_02s0025g02570.t01	Wine grape	endoplasmic reticulum, golgi	45.93	47.15

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100263118	wikigene:100263118	MapMan:50.1.13	EMBL:AM424070	ProteinID:CAN73323
ProteinID:CAN73323.1	ProteinID:CCB58964	ProteinID:CCB58964.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	UniProt:F6HWA0	EMBL:FN596265	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748
GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100263118
wikigene:LOC100263118	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298
PANTHER:PTHR24298:SF66	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI00015CC4D0	ArrayExpress:VIT_18s0001g00590	EnsemblPlantsGene:VIT_18s0001g00590
EnsemblPlants:VIT_18s0001g00590.t01	RefSeq:XP_002264483	RefSeq:XP_002264483.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr18_random:+:1435268..1437180

Molecular Weight (calculated)

59624.6 Da

IEP (calculated)

8.996

GRAVY (calculated)

0.057

Length

540 amino acids

Sequence
(BLAST)

001: MEFSFKSEYT NWWVFTLPAL VETQNLSKGL ILLFILIVFL SIGLLSWAFS AGGAAWKNGR NQMGRVSIPG PRGIPIFGSL FSLSHGLAHR TLASMALSSA
101: ATQLMAFSLG STPTVVSSEP CTAREILTSP QFADRPIKQS VKSLMFSRAI GFAPNGAYWR LLRRISSSHL FAPKRIAAHE GGRQLDCTAM LQSIAKEQSA
201: NGAVVLRKHL QAAALNNIMG TVFGKRLNPV EDRMEARELH EIVKEGFELL GAFNWSDHLP WLNYFYDPFG INQRCSALVP RVRKLVKGII KEHQLSGSNK
301: LSDKSDFVDV LLSLDGEEKL EEEDMVAVLW EMIFRGTDTT ALLTEWVMAE LILNPKVQAK LHEELHLTTL GNKAITDANV AKLPYLQAVI KETLRVHPPG
401: PLLSWARLST SDVHLSNGMV IPSNTTAMVN MWAITHDPNL WKDPLAFKPE RFLPSAGGAD VDVRGCDLRL APFGAGRRVC PGKNLGLVTV SLWVAKLVHH
501: FDWVQDMAQP VDLSEVLKLS CEMKNPLSAV PVPRSGAIHI

Best Arabidopsis Sequence Match ( AT5G09970.1 )
(BLAST)

001: MELMNLASKE TSYWMIALPA GFGSQNLHDV STLGYLFLAV VFLSIVTWAL AGGGGVAWKN GRNRLGRVAI PGPRGIPVFG SLFTLSRGLA HRTLAAMAWS
101: RANTEIMAFS LGSTPVIVAS EPNIAREILM SPHFADRPVK QSAKSLMFSR AIGFAPNGTY WRMLRRIAST HLFAPRRILA HEAGRQLDCA EMVKAVSVEQ
201: NGAGSVVLRK HLQLAALNNI MGSVFGRRYD PLAQKEDLDE LTSMVREGFE LLGAFNWSDY LPWLGYFYDS IRLNQRCSDL VPRIRTLVKK IIDEHRVSNS
301: EKKRDIGDFV DVLLSLDGDE KLQEDDMIAV LWEMIFRGTD TTALLTEWTM AELVLNPNVQ TKLRDEILTA VGDGADGDVA DADLAKLPYL NAVVKETLRL
401: HPPGPLLSWA RLSTSDVQLS NGMVIPKGTT AMVNMWAITH DQTVWSDPLK FDPERFTGNA DMDIRGGDLR LAPFGAGRRV CPGKNMGLAT VTRWVAELVR
501: RFEWGQDQTE PVDLGEVLKL SCEMEHPLRA VVTEIF

Arabidopsis Description

CYP78A7Cytochrome P450 78A7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIB0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.