Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 3
- nucleus 1
- endoplasmic reticulum 5
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g056810.1.1 | Tomato | endoplasmic reticulum | 93.48 | 93.66 |
| VIT_18s0001g00590.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 69.09 | 68.7 |
| GSMUA_AchrUn_... | Banana | cytosol | 25.88 | 62.9 |
| PGSC0003DMT400042702 | Potato | endoplasmic reticulum, plasma membrane, plastid | 62.76 | 62.06 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 46.93 | 59.15 |
| Zm00001d033020_P001 | Maize | endoplasmic reticulum | 56.42 | 55.29 |
| EER91649 | Sorghum | endoplasmic reticulum, plasma membrane | 56.8 | 55.25 |
| PGSC0003DMT400014094 | Potato | cytosol | 24.21 | 54.62 |
| Os10t0403000-01 | Rice | endoplasmic reticulum, plasma membrane | 55.31 | 53.51 |
| KRG91754 | Soybean | peroxisome | 32.4 | 53.37 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 34.26 | 53.03 |
| PGSC0003DMT400000685 | Potato | cytosol | 41.71 | 51.14 |
| PGSC0003DMT400074847 | Potato | mitochondrion | 41.53 | 51.03 |
| PGSC0003DMT400035609 | Potato | mitochondrion | 40.22 | 49.32 |
| PGSC0003DMT400063324 | Potato | endoplasmic reticulum | 45.62 | 47.57 |
Protein Annotations
| Gene3D:1.10.630.10 | EntrezGene:102597479 | MapMan:50.1.13 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I |
| InterPro:Cyt_P450_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0016705 | GO:GO:0020037 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036396 | UniProt:M1BF19 |
| PFAM:PF00067 | EnsemblPlantsGene:PGSC0003DMG400016960 | PGSC:PGSC0003DMG400016960 | EnsemblPlants:PGSC0003DMT400043673 | PRINTS:PR00385 | PRINTS:PR00463 |
| ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF66 | SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI0002961E0B |
| RefSeq:XP_006360309.1 | : | : | : | : | : |
Description
Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400016960]
Coordinates
chr12:+:54965266..54967004
Molecular Weight (calculated)
60907.9 Da
IEP (calculated)
7.500
GRAVY (calculated)
-0.049
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFTSIYEDF TWWMFTLPPI LGTQNFFTLL IPTFVVFMVI TIFTWAFTSG GPAWKNGLNS MGRVPIPGPR GLPIFGSLFN LSHGLAHQTL AFTASAYGAT
101: QVMAFSLGST RAIVSSDPTI AREILTSPHF SNRPVKKSAK QLMFSRAIGF APDGTYWRLL RKIASSHFFA PKRILAHEGE RQLECNSMLV YIAKEQNMHG
201: LVTIRKHLQF ASLNNIMGIV FGKKYEMNIE ENKEAKELQE IVNEGFELLG AFNWSDHLSW LNYFYDPFTL KERCAALVPR VEFFVKKMIQ EHKNENSKKI
301: LEAHCDFVDV LLALNGEEKL HEDDMVAILW EMIFRGTDTT ALLTEWVMSE LVLNQEIQEK IHNELQTIVG KNENVRDAHI SKLPYLQAVI KETLRLHPPG
401: PLLSWARLST SDVHLSNGMI IPSNTTAMIN MWSITHDPNV WDNPSTFKPE RFLKSSGGMD FDVRGNDLRL APFGAGRRVC PGKNLGLVTV SLWVAKLVQQ
501: FIWVENETHP IDLSEVLKLS CEMKYPLSAK AVPRILD
101: QVMAFSLGST RAIVSSDPTI AREILTSPHF SNRPVKKSAK QLMFSRAIGF APDGTYWRLL RKIASSHFFA PKRILAHEGE RQLECNSMLV YIAKEQNMHG
201: LVTIRKHLQF ASLNNIMGIV FGKKYEMNIE ENKEAKELQE IVNEGFELLG AFNWSDHLSW LNYFYDPFTL KERCAALVPR VEFFVKKMIQ EHKNENSKKI
301: LEAHCDFVDV LLALNGEEKL HEDDMVAILW EMIFRGTDTT ALLTEWVMSE LVLNQEIQEK IHNELQTIVG KNENVRDAHI SKLPYLQAVI KETLRLHPPG
401: PLLSWARLST SDVHLSNGMI IPSNTTAMIN MWSITHDPNV WDNPSTFKPE RFLKSSGGMD FDVRGNDLRL APFGAGRRVC PGKNLGLVTV SLWVAKLVQQ
501: FIWVENETHP IDLSEVLKLS CEMKYPLSAK AVPRILD
001: MELMNLASKE TSYWMIALPA GFGSQNLHDV STLGYLFLAV VFLSIVTWAL AGGGGVAWKN GRNRLGRVAI PGPRGIPVFG SLFTLSRGLA HRTLAAMAWS
101: RANTEIMAFS LGSTPVIVAS EPNIAREILM SPHFADRPVK QSAKSLMFSR AIGFAPNGTY WRMLRRIAST HLFAPRRILA HEAGRQLDCA EMVKAVSVEQ
201: NGAGSVVLRK HLQLAALNNI MGSVFGRRYD PLAQKEDLDE LTSMVREGFE LLGAFNWSDY LPWLGYFYDS IRLNQRCSDL VPRIRTLVKK IIDEHRVSNS
301: EKKRDIGDFV DVLLSLDGDE KLQEDDMIAV LWEMIFRGTD TTALLTEWTM AELVLNPNVQ TKLRDEILTA VGDGADGDVA DADLAKLPYL NAVVKETLRL
401: HPPGPLLSWA RLSTSDVQLS NGMVIPKGTT AMVNMWAITH DQTVWSDPLK FDPERFTGNA DMDIRGGDLR LAPFGAGRRV CPGKNMGLAT VTRWVAELVR
501: RFEWGQDQTE PVDLGEVLKL SCEMEHPLRA VVTEIF
101: RANTEIMAFS LGSTPVIVAS EPNIAREILM SPHFADRPVK QSAKSLMFSR AIGFAPNGTY WRMLRRIAST HLFAPRRILA HEAGRQLDCA EMVKAVSVEQ
201: NGAGSVVLRK HLQLAALNNI MGSVFGRRYD PLAQKEDLDE LTSMVREGFE LLGAFNWSDY LPWLGYFYDS IRLNQRCSDL VPRIRTLVKK IIDEHRVSNS
301: EKKRDIGDFV DVLLSLDGDE KLQEDDMIAV LWEMIFRGTD TTALLTEWTM AELVLNPNVQ TKLRDEILTA VGDGADGDVA DADLAKLPYL NAVVKETLRL
401: HPPGPLLSWA RLSTSDVQLS NGMVIPKGTT AMVNMWAITH DQTVWSDPLK FDPERFTGNA DMDIRGGDLR LAPFGAGRRV CPGKNMGLAT VTRWVAELVR
501: RFEWGQDQTE PVDLGEVLKL SCEMEHPLRA VVTEIF
Arabidopsis Description
CYP78A7Cytochrome P450 78A7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIB0]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.