Factsheet for PGSC0003DMT400000685

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
endoplasmic reticulum 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014094	Potato	cytosol	42.92	78.99
Solyc01g096280.1.1	Tomato	endoplasmic reticulum, golgi	95.21	77.51
PGSC0003DMT400035609	Potato	mitochondrion	73.52	73.52
CDY71495	Canola	mitochondrion	59.59	66.41
OQU75572	Sorghum	mitochondrion	39.73	65.41
VIT_15s0048g02900.t01	Wine grape	endoplasmic reticulum, plasma membrane	75.8	62.29
VIT_02s0025g02570.t01	Wine grape	endoplasmic reticulum, golgi	73.52	61.22
KRG97225	Soybean	endoplasmic reticulum, golgi, plastid	70.32	58.89
Bra039267.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	70.78	58.82
CDY61720	Canola	endoplasmic reticulum, plasma membrane	70.78	58.82
CDX80036	Canola	endoplasmic reticulum, plasma membrane, plastid	70.78	58.71
CDY41546	Canola	endoplasmic reticulum, plasma membrane	70.78	58.71
KRH06409	Soybean	extracellular, plasma membrane	71.69	58.58
CDY27309	Canola	endoplasmic reticulum, golgi	70.32	58.44
Bra004517.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	70.09	58.14
AT2G46660.1	Thale cress	endoplasmic reticulum, plasma membrane	69.63	57.55
KRH47844	Soybean	endoplasmic reticulum, golgi, plastid	71.0	57.38
CDX89135	Canola	endoplasmic reticulum, vacuole	70.09	57.28
CDX71698	Canola	endoplasmic reticulum, golgi	69.18	56.95
CDY57871	Canola	endoplasmic reticulum, golgi	68.72	56.47
Bra007636.1-P	Field mustard	endoplasmic reticulum, golgi	68.49	56.39
AT3G61880.2	Thale cress	endoplasmic reticulum	70.78	55.86
Bra032624.1-P	Field mustard	endoplasmic reticulum	67.58	55.43
CDY37995	Canola	endoplasmic reticulum	67.81	55.1
Bra033278.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	67.12	54.95
CDY32439	Canola	endoplasmic reticulum	67.58	54.92
AT1G01190.2	Thale cress	endoplasmic reticulum, golgi	67.12	54.44
CDX90016	Canola	endoplasmic reticulum, golgi, plastid	66.89	54.26
CDY15193	Canola	endoplasmic reticulum, golgi, plastid	66.21	53.8
Zm00001d053202_P001	Maize	endoplasmic reticulum	64.38	51.93
TraesCS5A01G316600.1	Wheat	endoplasmic reticulum	63.01	51.69
TraesCS7B01G168800.1	Wheat	plastid	65.07	51.63
TraesCS7D01G271100.1	Wheat	endoplasmic reticulum, plasma membrane	64.84	51.45
HORVU7Hr1G057100.2	Barley	endoplasmic reticulum, plasma membrane	64.38	51.37
TraesCS7A01G270700.1	Wheat	endoplasmic reticulum, plasma membrane	64.38	51.37
OQU80753	Sorghum	endoplasmic reticulum	63.7	51.19
TraesCS5B01G317200.1	Wheat	endoplasmic reticulum	62.79	51.12
TraesCS5D01G322900.1	Wheat	endoplasmic reticulum	62.79	51.12
PGSC0003DMT400074847	Potato	mitochondrion	50.91	51.03
Zm00001d032042_P001	Maize	endoplasmic reticulum	64.84	50.99
Os08t0547300-01	Rice	endoplasmic reticulum, plasma membrane, plastid	63.47	50.45
Os09t0528700-00	Rice	endoplasmic reticulum, plasma membrane, plastid	63.7	50.45
EER99230	Sorghum	endoplasmic reticulum	62.56	49.73
GSMUA_Achr2P03370_001	Banana	endoplasmic reticulum, plasma membrane, plastid	51.37	49.34
HORVU5Hr1G081060.2	Barley	mitochondrion	62.56	48.75
Zm00001d006193_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	62.1	48.48
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane, plastid	45.21	48.06
PGSC0003DMT400063324	Potato	endoplasmic reticulum	55.94	47.57
GSMUA_Achr11P...	Banana	plastid	56.39	47.14
GSMUA_Achr1P07820_001	Banana	endoplasmic reticulum, golgi, plastid	46.12	47.09
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	50.91	46.85
EER92912	Sorghum	endoplasmic reticulum	56.39	44.99
Zm00001d027537_P001	Maize	endoplasmic reticulum	55.94	44.87
Os03t0134500-00	Rice	endoplasmic reticulum	55.71	44.61
TraesCS5A01G502000.1	Wheat	endoplasmic reticulum	56.16	44.4
TraesCS4D01G327400.1	Wheat	endoplasmic reticulum	55.71	44.2
HORVU4Hr1G081210.1	Barley	endoplasmic reticulum, plasma membrane	55.48	43.7
PGSC0003DMT400042702	Potato	endoplasmic reticulum, plasma membrane, plastid	53.2	42.91
PGSC0003DMT400043673	Potato	endoplasmic reticulum	51.14	41.71
TraesCS4B01G330500.1	Wheat	mitochondrion	55.48	40.5
HORVU5Hr1G057180.2	Barley	cytosol	32.88	36.64

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M0ZH61	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400000244	PGSC:PGSC0003DMG400000244	EnsemblPlants:PGSC0003DMT400000685
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF46	SUPFAM:SSF48264
UniParc:UPI00029575F9	:	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400000244]

Coordinates

chr1:-:73857812..73860555

Molecular Weight (calculated)

49269.0 Da

IEP (calculated)

7.272

GRAVY (calculated)

-0.010

Length

438 amino acids

Sequence
(BLAST)

001: MAESCVAKRL MSLSLGETRV IVTCNPDVAK EILNSSVFAD RPVKESAYSL MFNRAIGFAP YGVYWRTLRK IAATHLFCPK QIKASEAQRF QIVRQMVTMF
101: QLGGQDVVRV RDALKLASLN NMMCSVFGRK YSLDCCNAET EELGKLVEEG YELLGMLNWS DHLSCLAEFD PQKIRLRCSR LVPKVNKFVS RIINEHKAQL
201: GDVHPDFVHV LLSLQGSERL SDSDMIAVLW EMIFRGTDTV AVLIEWILAR MLIHPQVQSK VQTELDRIVG ESRALTESDV SEMTYLPAVI KEVLRLHPPG
301: PLLSWARLAI TDTTVDGYHV PAGTTAMVNM WAITRDPDVW ADPLEFQPER FVNGPDFSVL GSDLRLAPFG SGRRTCPGKT LGLTTVTFWV ATLLHEFRFG
401: PIENNGPVDL SEVLRLSCEM VNPLTVRVRP RHALHQTQ

Best Arabidopsis Sequence Match ( AT3G61880.2 )
(BLAST)

001: MATKLDTSSL LLALLSKCSL LTQTNLALSL LVASLASLAL SLFFWSHPGG PAWGKYFLHR RRQTTVIPGP RGLPFVGSMS LMSNTLAHRC IAATAEKFRA
101: ERLMAFSLGE TRVIVTCNPD VAKEILNSPV FADRPVKESA YSLMFNRAIG FAPYGVYWRT LRKIASNHLF SPKQIKRSET QRSVIANQIV KCLTKQSNTK
201: GLCFARDLIK TASLNNMMCS VFGKEYELEE EHEEVSELRE LVEEGYDLLG TLNWTDHLPW LSEFDPQRIR SRCSNLVPKV NRFVNRIISD HREQTRDSPS
301: DFVDVLLSLD GPDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DIQSTVHNEL DQIVGRSRAV EESDVVSLVY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTII DGRRVPAGTT AMVNMWAIAH DPHVWENPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRVCPGKNLG LTTVTFWTAT LLHEFEWLTP
501: SDEKTVDLSE KLRLSCEMAN PLAAKLRPRR SFSQKNKIKN KESKGNKKKE SYKKY

Arabidopsis Description

CYP78A9Cytochrome p450 78a9 [Source:UniProtKB/TrEMBL;Acc:F4IX02]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.