Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
- mitochondrion 1
- endoplasmic reticulum 5
- extracellular 3
- vacuole 3
- plasma membrane 3
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033278.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 88.33 | 89.16 |
| CDX90016 | Canola | endoplasmic reticulum, golgi, plastid | 88.89 | 88.89 |
| CDY15193 | Canola | endoplasmic reticulum, golgi, plastid | 88.15 | 88.31 |
| CDY37995 | Canola | endoplasmic reticulum | 87.96 | 88.13 |
| Bra032624.1-P | Field mustard | endoplasmic reticulum | 86.85 | 87.83 |
| CDY32439 | Canola | endoplasmic reticulum | 87.59 | 87.76 |
| PGSC0003DMT400014094 | Potato | cytosol | 30.19 | 68.49 |
| AT2G46660.1 | Thale cress | endoplasmic reticulum, plasma membrane | 66.3 | 67.55 |
| PGSC0003DMT400000685 | Potato | cytosol | 54.44 | 67.12 |
| OQU75572 | Sorghum | mitochondrion | 31.48 | 63.91 |
| VIT_02s0025g02570.t01 | Wine grape | endoplasmic reticulum, golgi | 62.22 | 63.88 |
| VIT_15s0048g02900.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 62.78 | 63.6 |
| Solyc01g096280.1.1 | Tomato | endoplasmic reticulum, golgi | 62.78 | 63.01 |
| KRG97225 | Soybean | endoplasmic reticulum, golgi, plastid | 60.93 | 62.91 |
| AT3G61880.2 | Thale cress | endoplasmic reticulum | 64.63 | 62.88 |
| PGSC0003DMT400035609 | Potato | mitochondrion | 50.74 | 62.56 |
| KRH06409 | Soybean | extracellular, plasma membrane | 61.67 | 62.13 |
| Solyc10g009310.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 59.07 | 60.76 |
| KRH47844 | Soybean | endoplasmic reticulum, golgi, plastid | 60.19 | 59.96 |
| Solyc05g047680.2.1 | Tomato | endoplasmic reticulum, golgi | 57.22 | 58.19 |
| TraesCS5A01G316600.1 | Wheat | endoplasmic reticulum | 55.37 | 55.99 |
| Os09t0528700-00 | Rice | endoplasmic reticulum, plasma membrane, plastid | 57.22 | 55.88 |
| TraesCS5D01G322900.1 | Wheat | endoplasmic reticulum | 55.56 | 55.76 |
| TraesCS7B01G168800.1 | Wheat | plastid | 56.85 | 55.62 |
| TraesCS5B01G317200.1 | Wheat | endoplasmic reticulum | 55.19 | 55.39 |
| HORVU7Hr1G057100.2 | Barley | endoplasmic reticulum, plasma membrane | 56.3 | 55.37 |
| TraesCS7D01G271100.1 | Wheat | endoplasmic reticulum, plasma membrane | 56.48 | 55.25 |
| GSMUA_Achr1P07820_001 | Banana | endoplasmic reticulum, golgi, plastid | 43.89 | 55.24 |
| OQU80753 | Sorghum | endoplasmic reticulum | 55.74 | 55.23 |
| Zm00001d053202_P001 | Maize | endoplasmic reticulum | 55.19 | 54.88 |
| TraesCS7A01G270700.1 | Wheat | endoplasmic reticulum, plasma membrane | 55.74 | 54.83 |
| GSMUA_Achr2P03370_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 46.3 | 54.82 |
| Zm00001d032042_P001 | Maize | endoplasmic reticulum | 56.11 | 54.4 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane, plastid | 41.48 | 54.37 |
| Os08t0547300-01 | Rice | endoplasmic reticulum, plasma membrane, plastid | 55.37 | 54.27 |
| HORVU5Hr1G081060.2 | Barley | mitochondrion | 56.11 | 53.91 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 47.22 | 53.57 |
| EER99230 | Sorghum | endoplasmic reticulum | 54.63 | 53.54 |
| GSMUA_Achr11P... | Banana | plastid | 50.74 | 52.29 |
| Zm00001d006193_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 53.89 | 51.87 |
| Os03t0134500-00 | Rice | endoplasmic reticulum | 51.3 | 50.64 |
| EER92912 | Sorghum | endoplasmic reticulum | 50.74 | 49.91 |
| TraesCS4D01G327400.1 | Wheat | endoplasmic reticulum | 50.56 | 49.46 |
| Zm00001d027537_P001 | Maize | endoplasmic reticulum | 50.0 | 49.45 |
| HORVU4Hr1G081210.1 | Barley | endoplasmic reticulum, plasma membrane | 50.74 | 49.28 |
| TraesCS5A01G502000.1 | Wheat | endoplasmic reticulum | 50.56 | 49.28 |
| AT5G09970.1 | Thale cress | endoplasmic reticulum | 46.11 | 46.46 |
| AT1G74110.1 | Thale cress | plastid | 46.11 | 46.37 |
| AT1G13710.1 | Thale cress | endoplasmic reticulum | 44.26 | 46.23 |
| TraesCS4B01G330500.1 | Wheat | mitochondrion | 50.37 | 45.33 |
| HORVU5Hr1G057180.2 | Barley | cytosol | 31.11 | 42.75 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EntrezGene:839233 | UniProt:A0A178WIC4 | UniProt:A0A1P8AVN2 | ProteinID:AEE27252.1 |
| ProteinID:ANM60724.1 | ArrayExpress:AT1G01190 | EnsemblPlantsGene:AT1G01190 | RefSeq:AT1G01190 | TAIR:AT1G01190 | RefSeq:AT1G01190-TAIR-G |
| EnsemblPlants:AT1G01190.2 | Unigene:At.51445 | Symbol:CYP78A8 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I |
| InterPro:Cyt_P450_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0016705 | GO:GO:0016709 | GO:GO:0019748 | GO:GO:0020037 | GO:GO:0044550 |
| GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036396 | RefSeq:NP_001318901.1 | RefSeq:NP_171627.2 | ProteinID:OAP18110.1 |
| PFAM:PF00067 | PRINTS:PR00385 | PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF46 |
| SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI0007E26820 | SEG:seg | : | : |
Description
CYP78A8CYP78A8 [Source:UniProtKB/TrEMBL;Acc:A0A178WIC4]
Coordinates
chr1:-:83045..84946
Molecular Weight (calculated)
60911.0 Da
IEP (calculated)
8.222
GRAVY (calculated)
0.011
Length
540 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSLNMRTEI ESLWVFALAS KFNIYMQQHF ASLLVAIAIT WFTITIVFWS TPGGPAWGKY FFTRRFISLD YNRKYKNLIP GPRGFPLVGS MSLRSSHVAH
101: QRIASVAEMS NAKRLMAFSL GDTKVVVTCH PAVAKEILNS SVFADRPVDE TAYGLMFNRA MGFAPNGTYW RTLRRLGSNH LFNPKQIKQS EDQRRVIATQ
201: MVNAFARNPK SACAVRDLLK TASLCNMMGL VFGREYELES NNNLESECLK GLVEEGYDLL GTLNWTDHLP WLAGLDFQQI RFRCSQLVPK VNLLLSRIIH
301: EQRAATGNFL DMLLSLQGSE KLSESDMVAV LWEMIFRGTD TVAVLVEWVL ARIVMHPKVQ LTVHDELDRV VGRSRTVDES DLPSLTYLTA MIKEVLRLHP
401: PGPLLSWARL SITDTSVDGY HVPAGTTAMV NMWAIARDPH VWEDPLEFKP ERFVAKEGEA EFSVFGSDLR LAPFGSGKRV CPGKNLGLTT VSFWVATLLH
501: EFEWLPSVEA NPPDLSEVLR LSCEMACPLI VNVSSRRKIM
101: QRIASVAEMS NAKRLMAFSL GDTKVVVTCH PAVAKEILNS SVFADRPVDE TAYGLMFNRA MGFAPNGTYW RTLRRLGSNH LFNPKQIKQS EDQRRVIATQ
201: MVNAFARNPK SACAVRDLLK TASLCNMMGL VFGREYELES NNNLESECLK GLVEEGYDLL GTLNWTDHLP WLAGLDFQQI RFRCSQLVPK VNLLLSRIIH
301: EQRAATGNFL DMLLSLQGSE KLSESDMVAV LWEMIFRGTD TVAVLVEWVL ARIVMHPKVQ LTVHDELDRV VGRSRTVDES DLPSLTYLTA MIKEVLRLHP
401: PGPLLSWARL SITDTSVDGY HVPAGTTAMV NMWAIARDPH VWEDPLEFKP ERFVAKEGEA EFSVFGSDLR LAPFGSGKRV CPGKNLGLTT VSFWVATLLH
501: EFEWLPSVEA NPPDLSEVLR LSCEMACPLI VNVSSRRKIM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.