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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • nucleus 2
  • endoplasmic reticulum 4
  • extracellular 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G270700.1 Wheat endoplasmic reticulum, plasma membrane 93.08 93.08
TraesCS7D01G271100.1 Wheat endoplasmic reticulum, plasma membrane 93.44 92.93
TraesCS7B01G168800.1 Wheat plastid 92.53 92.03
OQU75572 Sorghum mitochondrion 38.62 79.7
OQU80753 Sorghum endoplasmic reticulum 77.41 77.98
Os08t0547300-01 Rice endoplasmic reticulum, plasma membrane, plastid 78.14 77.86
Zm00001d053202_P001 Maize endoplasmic reticulum 76.68 77.53
Zm00001d032042_P001 Maize endoplasmic reticulum 75.77 74.69
HORVU5Hr1G081060.2 Barley mitochondrion 70.13 68.51
PGSC0003DMT400000685 Potato cytosol 51.37 64.38
CDY71495 Canola mitochondrion 46.08 64.38
PGSC0003DMT400014094 Potato cytosol 27.87 64.29
GSMUA_Achr2P03370_001 Banana endoplasmic reticulum, plasma membrane, plastid 52.82 63.6
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 54.64 63.03
VIT_02s0025g02570.t01 Wine grape endoplasmic reticulum, golgi 59.02 61.6
GSMUA_Achr1P07820_001 Banana endoplasmic reticulum, golgi, plastid 48.09 61.54
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane, plastid 45.72 60.92
PGSC0003DMT400035609 Potato mitochondrion 48.45 60.73
VIT_15s0048g02900.t01 Wine grape endoplasmic reticulum, plasma membrane 58.83 60.6
GSMUA_Achr11P... Banana plastid 57.19 59.92
CDX71698 Canola endoplasmic reticulum, golgi 57.92 59.77
CDY61720 Canola endoplasmic reticulum, plasma membrane 57.38 59.77
CDY27309 Canola endoplasmic reticulum, golgi 57.38 59.77
Bra039267.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 57.38 59.77
Bra004517.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 57.38 59.66
CDX89135 Canola endoplasmic reticulum, vacuole 58.11 59.51
Solyc01g096280.1.1 Tomato endoplasmic reticulum, golgi 58.29 59.48
CDY41546 Canola endoplasmic reticulum, plasma membrane 57.19 59.47
CDX80036 Canola endoplasmic reticulum, plasma membrane, plastid 57.19 59.47
CDY57871 Canola endoplasmic reticulum, golgi 57.56 59.29
Bra007636.1-P Field mustard endoplasmic reticulum, golgi 57.38 59.21
AT2G46660.1 Thale cress endoplasmic reticulum, plasma membrane 57.01 59.06
KRH06409 Soybean extracellular, plasma membrane 57.19 58.58
AT3G61880.2 Thale cress endoplasmic reticulum 59.2 58.56
KRG97225 Soybean endoplasmic reticulum, golgi, plastid 55.74 58.51
KRH47844 Soybean endoplasmic reticulum, golgi, plastid 56.83 57.56
HORVU5Hr1G057180.2 Barley cytosol 41.17 57.51
Bra033278.1-P Field mustard endoplasmic reticulum, golgi, plastid 55.74 57.2
Bra032624.1-P Field mustard endoplasmic reticulum 55.56 57.12
Solyc10g009310.2.1 Tomato endoplasmic reticulum, plasma membrane 54.46 56.95
CDX90016 Canola endoplasmic reticulum, golgi, plastid 55.92 56.85
CDY32439 Canola endoplasmic reticulum 55.56 56.59
CDY37995 Canola endoplasmic reticulum 55.37 56.4
AT1G01190.2 Thale cress endoplasmic reticulum, golgi 55.37 56.3
CDY15193 Canola endoplasmic reticulum, golgi, plastid 55.19 56.22
Solyc05g047680.2.1 Tomato endoplasmic reticulum, golgi 53.01 54.8
HORVU4Hr1G081210.1 Barley endoplasmic reticulum, plasma membrane 53.92 53.24
HORVU2Hr1G032890.2 Barley endoplasmic reticulum, plasma membrane 47.54 47.89
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114
EnsemblPlantsGene:HORVU7Hr1G057100EnsemblPlants:HORVU7Hr1G057100.2InterPro:IPR036396UniProt:M0YFA0PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF314SUPFAM:SSF48264UniParc:UPI0002950D4B
SEG:seg:::::
Description
No Description!
Coordinates
chrchr7H:-:243842732..243845025
Molecular Weight (calculated)
60045.6 Da
IEP (calculated)
9.385
GRAVY (calculated)
0.045
Length
549 amino acids
Sequence
(BLAST)
001: MAPSEECGWL LYVSLAAKCC ANGDGEPYRV VSFVAVLLAA FVVTSLLHWS SQGGAAWGRY WWTRKGLGIG EARVPGPRGF PVIGSMGLMT GLAHRKLAVA
101: ASGNVRRRRL MAFSMGETRV VVTADPDVAR ELLASPAFAD RPVKESAYGL MFHRAIGFAP YGAYWRTLRR VSSSHLFSPR QVAASAAQRA VIARQMVDAM
201: RPVGSAGIKH VEARRFLKRA SLHNVMWSVF GRRYELDEVE SEEAAELKSL VDQGYDLLGQ LNWSDHLPWL ARFDLQKIRS KCSALVPRVN RFVGRIIDEH
301: RAARNDADAD AVVDFTDVLL SLQGSDKLSD ADMTAVLWEM IFRGTDTVAV VIEWVLARLV LHQGVQARVH EELDRVVGPN RAVTESDAAS LVFLQAVVKE
401: VLRLHPPGPL LSWARLATSD VHVGGLLVPA GTTAMVNMWA ITHDPAVWAK PGEFKPERFL AGPLSADFSV TGSDLRLAPF GSGRRSCPGK SLAMATVGFW
501: VATLLHEFEW TPPPPSSAGP GGVDMSEVLR LSCEMAAPLE ARLRPRRTV
Best Arabidopsis Sequence Match ( AT3G61880.2 )
(BLAST)
001: MATKLDTSSL LLALLSKCSL LTQTNLALSL LVASLASLAL SLFFWSHPGG PAWGKYFLHR RRQTTVIPGP RGLPFVGSMS LMSNTLAHRC IAATAEKFRA
101: ERLMAFSLGE TRVIVTCNPD VAKEILNSPV FADRPVKESA YSLMFNRAIG FAPYGVYWRT LRKIASNHLF SPKQIKRSET QRSVIANQIV KCLTKQSNTK
201: GLCFARDLIK TASLNNMMCS VFGKEYELEE EHEEVSELRE LVEEGYDLLG TLNWTDHLPW LSEFDPQRIR SRCSNLVPKV NRFVNRIISD HREQTRDSPS
301: DFVDVLLSLD GPDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DIQSTVHNEL DQIVGRSRAV EESDVVSLVY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTII DGRRVPAGTT AMVNMWAIAH DPHVWENPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRVCPGKNLG LTTVTFWTAT LLHEFEWLTP
501: SDEKTVDLSE KLRLSCEMAN PLAAKLRPRR SFSQKNKIKN KESKGNKKKE SYKKY
Arabidopsis Description
CYP78A9Cytochrome p450 78a9 [Source:UniProtKB/TrEMBL;Acc:F4IX02]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.