CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89135	Canola	endoplasmic reticulum, vacuole	97.71	71.64
PGSC0003DMT400014094	Potato	cytosol	41.73	68.91
CDX71698	Canola	endoplasmic reticulum, golgi	90.59	66.92
OQU75572	Sorghum	mitochondrion	45.04	66.54
CDY57871	Canola	endoplasmic reticulum, golgi	89.82	66.23
AT3G61880.2	Thale cress	endoplasmic reticulum	89.31	63.24
PGSC0003DMT400000685	Potato	cytosol	66.41	59.59
CDY61720	Canola	endoplasmic reticulum, plasma membrane	79.9	59.58
CDY41546	Canola	endoplasmic reticulum, plasma membrane	79.9	59.47
CDX80036	Canola	endoplasmic reticulum, plasma membrane, plastid	79.64	59.28
CDY27309	Canola	endoplasmic reticulum, golgi	79.39	59.2
PGSC0003DMT400035609	Potato	mitochondrion	64.12	57.53
CDY42442	Canola	cytosol	44.27	53.87
CDX90016	Canola	endoplasmic reticulum, golgi, plastid	70.99	51.67
CDY15193	Canola	endoplasmic reticulum, golgi, plastid	70.48	51.39
CDY37995	Canola	endoplasmic reticulum	70.48	51.39
CDY32439	Canola	endoplasmic reticulum	69.97	51.02
VIT_15s0048g02900.t01	Wine grape	endoplasmic reticulum, plasma membrane	68.19	50.28
VIT_02s0025g02570.t01	Wine grape	endoplasmic reticulum, golgi	66.67	49.81
KRG97225	Soybean	endoplasmic reticulum, golgi, plastid	65.39	49.14
KRH06409	Soybean	extracellular, plasma membrane	66.92	49.07
Solyc01g096280.1.1	Tomato	endoplasmic reticulum, golgi	66.92	48.88
KRH47844	Soybean	endoplasmic reticulum, golgi, plastid	67.18	48.71
Solyc10g009310.2.1	Tomato	endoplasmic reticulum, plasma membrane	64.38	48.19
Solyc05g047680.2.1	Tomato	endoplasmic reticulum, golgi	63.36	46.89
TraesCS7B01G168800.1	Wheat	plastid	65.65	46.74
TraesCS5A01G316600.1	Wheat	endoplasmic reticulum	63.1	46.44
TraesCS7D01G271100.1	Wheat	endoplasmic reticulum, plasma membrane	65.14	46.38
HORVU7Hr1G057100.2	Barley	endoplasmic reticulum, plasma membrane	64.38	46.08
Os09t0528700-00	Rice	endoplasmic reticulum, plasma membrane, plastid	64.63	45.93
TraesCS7A01G270700.1	Wheat	endoplasmic reticulum, plasma membrane	64.12	45.9
OQU80753	Sorghum	endoplasmic reticulum	63.61	45.87
Os08t0547300-01	Rice	endoplasmic reticulum, plasma membrane, plastid	64.12	45.73
TraesCS5B01G317200.1	Wheat	endoplasmic reticulum	62.6	45.72
TraesCS5D01G322900.1	Wheat	endoplasmic reticulum	62.6	45.72
Zm00001d053202_P001	Maize	endoplasmic reticulum	62.34	45.12
Zm00001d032042_P001	Maize	endoplasmic reticulum	63.36	44.7
HORVU5Hr1G081060.2	Barley	mitochondrion	63.87	44.66
EER99230	Sorghum	endoplasmic reticulum	61.32	43.74
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	52.16	43.07
CDY68665	Canola	plastid	52.16	42.53
GSMUA_Achr11P...	Banana	plastid	56.23	42.18
Zm00001d006193_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	60.05	42.07
CDY16102	Canola	plastid	51.65	41.94
GSMUA_Achr2P03370_001	Banana	endoplasmic reticulum, plasma membrane, plastid	47.84	41.23
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane, plastid	42.49	40.53
GSMUA_Achr1P07820_001	Banana	endoplasmic reticulum, golgi, plastid	44.02	40.33
Os03t0134500-00	Rice	endoplasmic reticulum	55.98	40.22
TraesCS4D01G327400.1	Wheat	endoplasmic reticulum	56.23	40.04
TraesCS5A01G502000.1	Wheat	endoplasmic reticulum	56.23	39.89
CDX98123	Canola	endoplasmic reticulum, plasma membrane	52.16	39.73
CDY49134	Canola	endoplasmic reticulum, golgi, plasma membrane	53.44	39.47
CDX96516	Canola	endoplasmic reticulum, plasma membrane	53.18	39.43
HORVU4Hr1G081210.1	Barley	endoplasmic reticulum, plasma membrane	55.73	39.39
Zm00001d027537_P001	Maize	endoplasmic reticulum	54.71	39.38
EER92912	Sorghum	endoplasmic reticulum	54.96	39.34
CDY36404	Canola	endoplasmic reticulum, plasma membrane	51.65	39.34
CDX73053	Canola	extracellular, plasma membrane	52.93	39.25
CDX69873	Canola	endoplasmic reticulum	52.93	38.95
CDY21618	Canola	endoplasmic reticulum	52.67	38.69
TraesCS4B01G330500.1	Wheat	mitochondrion	56.23	36.83
CDY42443	Canola	endoplasmic reticulum, plasma membrane	42.24	35.93
HORVU5Hr1G057180.2	Barley	cytosol	30.28	30.28
CDY42441	Canola	endoplasmic reticulum, plasma membrane	3.82	8.93

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	GO:A0A078JYK6	UniProt:A0A078JYK6	EnsemblPlants:CDY71495	ProteinID:CDY71495
ProteinID:CDY71495.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00016706001
InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298
PANTHER:PTHR24298:SF46	SUPFAM:SSF48264	UniParc:UPI0004EEFE0C	:	:	:

Description

BnaCnng73170DBnaCnng73170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JYK6]

Coordinates

chrLK046086:-:967..2562

Molecular Weight (calculated)

44551.6 Da

IEP (calculated)

5.978

GRAVY (calculated)

-0.137

Length

393 amino acids

Sequence
(BLAST)

001: MFNRAIGFAP CGVYWRTLRR IASYHLFSPK QIKRSETQRR VIANQMVTCL AKQSSSNEGL CYARDLIKTA SLNNIMCSVF GKEYELEHEH DEVNELRGLV
101: EEGYDLLGTL NWTDHLPWLS EFDPQRIRSR CSSLVPKVNR FVNRIISDHR DQTRDSPSDF VDVLLSLDGP DKLSDLDMVA VLWEMIFRGT DTVAVLIEWI
201: LARMVLHQDI QTTVHNELDQ VVGRSKAVEE SDVASLTYLT AVIKEVLRLH PPGPLLSWAR LAITDTIIDG RRVPAGTTAM VNMWAIAHDP HVWENPLEFE
301: PERFVAKEGD VEFSVLGSDL RLAPFGSGRR VCPGKNMGLT TVTFWIATLL HEFEWLAPSS DDKTVDLSEK LRLSCEMANP LAVKLCCRRS ISV

Best Arabidopsis Sequence Match ( AT1G01190.1 )
(BLAST)

001: MRTEIESLWV FALASKFNIY MQQHFASLLV AIAITWFTIT IVFWSTPGGP AWGKYFFTRR FISLDYNRKY KNLIPGPRGF PLVGSMSLRS SHVAHQRIAS
101: VAEMSNAKRL MAFSLGDTKV VVTCHPAVAK EILNSSVFAD RPVDETAYGL MFNRAMGFAP NGTYWRTLRR LGSNHLFNPK QIKQSEDQRR VIATQMVNAF
201: ARNPKSACAV RDLLKTASLC NMMGLVFGRE YELESNNNLE SECLKGLVEE GYDLLGTLNW TDHLPWLAGL DFQQIRFRCS QLVPKVNLLL SRIIHEQRAA
301: TGNFLDMLLS LQGSEKLSES DMVAVLWEMI FRGTDTVAVL VEWVLARIVM HPKVQLTVHD ELDRVVGRSR TVDESDLPSL TYLTAMIKEV LRLHPPGPLL
401: SWARLSITDT SVDGYHVPAG TTAMVNMWAI ARDPHVWEDP LEFKPERFVA KEGEAEFSVF GSDLRLAPFG SGKRVCPGKN LGLTTVSFWV ATLLHEFEWL
501: PSVEANPPDL SEVLRLSCEM ACPLIVNVSS RRKIM

Arabidopsis Description

CYP78A8CYP78A8 [Source:UniProtKB/TrEMBL;Acc:A0A178WIC4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.