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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • cytosol 1
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040720.1-P Field mustard endoplasmic reticulum, plasma membrane 98.64 98.64
CDY36404 Canola endoplasmic reticulum, plasma membrane 96.71 96.71
CDY68665 Canola plastid 85.85 91.91
AT1G13710.1 Thale cress endoplasmic reticulum 91.09 90.91
CDY16102 Canola plastid 85.27 90.91
CDY42442 Canola cytosol 38.76 61.92
GSMUA_Achr9P26720_001 Banana endoplasmic reticulum, plasma membrane 49.22 61.35
GSMUA_Achr5P08920_001 Banana endoplasmic reticulum, plasma membrane 43.41 60.87
CDX96516 Canola endoplasmic reticulum, plasma membrane 61.05 59.43
CDX73053 Canola extracellular, plasma membrane 60.85 59.25
GSMUA_Achr1P04470_001 Banana extracellular, plasma membrane 41.67 58.74
GSMUA_Achr6P34990_001 Banana endoplasmic reticulum, plasma membrane 47.67 58.71
CDY49134 Canola endoplasmic reticulum, golgi, plasma membrane 58.72 56.95
GSMUA_Achr6P30750_001 Banana mitochondrion 20.74 56.61
CDY42443 Canola endoplasmic reticulum, plasma membrane 50.19 56.06
KXG39130 Sorghum endoplasmic reticulum 55.81 55.49
Zm00001d029526_P001 Maize endoplasmic reticulum, plasma membrane, plastid 54.07 54.17
Os03t0603100-00 Rice plasma membrane 22.09 53.77
Zm00001d022075_P001 Maize endoplasmic reticulum 53.88 53.46
Os03t0417700-01 Rice endoplasmic reticulum 53.1 53.2
EER97498 Sorghum endoplasmic reticulum, plasma membrane 53.1 53.0
TraesCS2D01G183000.1 Wheat endoplasmic reticulum, plasma membrane 52.13 52.33
CDY71495 Canola mitochondrion 39.73 52.16
TraesCS2B01G201900.1 Wheat endoplasmic reticulum, plasma membrane 52.13 52.03
Os07t0603700-01 Rice plasma membrane, plastid 52.33 51.43
TraesCS2A01G175700.1 Wheat endoplasmic reticulum, plasma membrane 51.55 51.35
CDY27309 Canola endoplasmic reticulum, golgi 50.78 49.72
CDY61720 Canola endoplasmic reticulum, plasma membrane 50.58 49.53
CDX80036 Canola endoplasmic reticulum, plasma membrane, plastid 50.58 49.43
HORVU2Hr1G032890.2 Barley endoplasmic reticulum, plasma membrane 52.13 49.36
CDY41546 Canola endoplasmic reticulum, plasma membrane 50.39 49.24
CDX89135 Canola endoplasmic reticulum, vacuole 50.39 48.51
CDY57871 Canola endoplasmic reticulum, golgi 49.61 48.03
CDX71698 Canola endoplasmic reticulum, golgi 49.22 47.74
GSMUA_AchrUn_... Banana plasma membrane, vacuole 24.81 47.58
CDY21618 Canola endoplasmic reticulum 49.22 47.48
Zm00001d047279_P001 Maize mitochondrion 34.3 46.95
CDX69873 Canola endoplasmic reticulum 48.45 46.82
CDY32439 Canola endoplasmic reticulum 47.29 45.27
CDY42441 Canola endoplasmic reticulum, plasma membrane 14.73 45.24
CDY37995 Canola endoplasmic reticulum 47.09 45.08
CDX90016 Canola endoplasmic reticulum, golgi, plastid 46.71 44.63
CDY15193 Canola endoplasmic reticulum, golgi, plastid 46.12 44.16
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13GO:A0A078EFJ4EnsemblPlants:CDX98123ProteinID:CDX98123ProteinID:CDX98123.1
InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016705GO:GO:0020037
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00105508001InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463
ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF50SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0004EDF23C
SEG:seg:::::
Description
BnaA06g08740D
Coordinates
chrLK031902:-:1179677..1181597
Molecular Weight (calculated)
57568.6 Da
IEP (calculated)
7.703
GRAVY (calculated)
-0.002
Length
516 amino acids
Sequence
(BLAST)
001: MSPEAYVLFF NSLNLVTFEA FAWLSLFVAT VAIFLSPGGL AWAWTKSSKT RVSIPGPSGS LSIFSGSNPH RVLAALAKRF KASPLMAFSV GFSRFVISSE
101: PETAKEILNS SAFADRPVKE SAYELLFHRA MGFAPYGEYW RNLRRISSTH LFSPRRIASF EGVRVGIGMK MVKKIKNAAG DGDVEVKEVI HFGSLNNVMT
201: TVFGESYDFD EVNGDGSFLE RLVSEGYELL GIFNWSDHFG VLRWFDFQGV RKRCRALVSE VNTFVGGIIE KHKMKKKNNN VNGEESDFVD VLLGLQKDEK
301: LSDSDMIAVL WEMIFRGTDT VAILVEWVLA RMVLHQDIQA ELYKEIASVT SNNTRSLSDS DIPKLPYLQA VVKETLRLHP PGPLLSWARL AIHDVHVGPN
401: LVPAGTIAMV NMWSITHDAK IWTDPEEFRP ERFIDGEDVS IMGSDLRLAP FGSGRRVCPG KAMGLATVHL WVGQMIQNFE WVKGSSDVDL AEVLKLSMEM
501: KKPLKCKAVP RNVCFG
Best Arabidopsis Sequence Match ( AT1G13710.1 )
(BLAST)
001: MSPEAYVLFF NSFNLVTFEA FASVSLIIAT VAFLLSPGGL AWAWTGSSKS RVSIPGPSGS LSVFSGSNPH RVLAALAKRF KASPLMAFSV GFSRFVISSE
101: PETAKEILSS SAFADRPVKE SAYELLFHRA MGFAPYGEYW RNLRRISSTH LFSPRRIASF EGVRVGIGMK MVKKIKSLVT SDACGEVEVK KIVHFGSLNN
201: VMTTVFGESY DFDEVNGKGC FLERLVSEGY ELLGIFNWSD HFWFLRWFDF QGVRKRCRAL VSEVNTFVGG IIEKHKMKKG NNLNGEENDF VDVLLGLQKD
301: EKLSDSDMIA VLWEMIFRGT DTVAILVEWV LARMVLHQDI QDKLYREIAS ATSNNIRSLS DSDIPKLPYL QAIVKETLRL HPPGPLLSWA RLAIHDVHVG
401: PNLVPAGTIA MVNMWSITHN AKIWTDPEAF MPERFISEDV SIMGSDLRLA PFGSGRRVCP GKAMGLATVH LWIGQLIQNF EWVKGSCDVE LAEVLKLSME
501: MKNPLKCKAV PRNVGFA
Arabidopsis Description
CYP78A5Cytochrome P450 78A5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMX7]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.