Factsheet for TraesCS2D01G183000.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G175700.1	Wheat	endoplasmic reticulum, plasma membrane	97.47	96.72
TraesCS2B01G201900.1	Wheat	endoplasmic reticulum, plasma membrane	97.08	96.52
HORVU2Hr1G032890.2	Barley	endoplasmic reticulum, plasma membrane	96.11	90.64
EER97498	Sorghum	endoplasmic reticulum, plasma membrane	79.77	79.3
Zm00001d022075_P001	Maize	endoplasmic reticulum	77.63	76.73
Os07t0603700-01	Rice	plasma membrane, plastid	75.88	74.29
GSMUA_Achr6P34990_001	Banana	endoplasmic reticulum, plasma membrane	51.17	62.77
GSMUA_Achr9P26720_001	Banana	endoplasmic reticulum, plasma membrane	50.0	62.08
CDY42442	Canola	cytosol	37.94	60.37
VIT_01s0011g00350.t01	Wine grape	endoplasmic reticulum, plasma membrane	58.75	58.3
Solyc03g114940.2.1	Tomato	endoplasmic reticulum	58.37	58.14
PGSC0003DMT400063324	Potato	endoplasmic reticulum	57.59	57.48
VIT_17s0000g05110.t01	Wine grape	endoplasmic reticulum, plasma membrane	58.37	57.14
CDY68665	Canola	plastid	52.72	56.22
KRH70942	Soybean	endoplasmic reticulum	56.03	55.81
KRH75078	Soybean	endoplasmic reticulum, plasma membrane	56.42	55.77
KRH03164	Soybean	extracellular, plasma membrane	56.81	55.3
KRH56779	Soybean	endoplasmic reticulum, plasma membrane	56.81	55.2
KRG96915	Soybean	endoplasmic reticulum	55.25	55.04
CDY16102	Canola	plastid	51.75	54.96
CDX73053	Canola	extracellular, plasma membrane	56.61	54.91
CDX96516	Canola	endoplasmic reticulum, plasma membrane	56.42	54.72
Bra015934.1-P	Field mustard	endoplasmic reticulum, plasma membrane	56.42	54.72
CDY49134	Canola	endoplasmic reticulum, golgi, plasma membrane	55.84	53.95
Bra008134.1-P	Field mustard	endoplasmic reticulum, golgi	55.45	53.57
Bra026892.1-P	Field mustard	endoplasmic reticulum	53.31	53.2
AT1G74110.1	Thale cress	plastid	55.06	52.7
AT1G13710.1	Thale cress	endoplasmic reticulum	52.92	52.61
CDY42443	Canola	endoplasmic reticulum, plasma membrane	46.89	52.16
CDY36404	Canola	endoplasmic reticulum, plasma membrane	52.33	52.13
CDX98123	Canola	endoplasmic reticulum, plasma membrane	52.33	52.13
Bra040720.1-P	Field mustard	endoplasmic reticulum, plasma membrane	51.95	51.74
GSMUA_Achr6P30750_001	Banana	mitochondrion	18.68	50.79
TraesCS5D01G322900.1	Wheat	endoplasmic reticulum	51.75	49.44
TraesCS7D01G271100.1	Wheat	endoplasmic reticulum, plasma membrane	51.17	47.64
TraesCS4D01G327400.1	Wheat	endoplasmic reticulum	46.89	43.66
CDY42441	Canola	endoplasmic reticulum, plasma membrane	12.26	37.5

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF50	SUPFAM:SSF48264	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS2D01G183000	EnsemblPlants:TraesCS2D01G183000.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:-:127258980..127260641

Molecular Weight (calculated)

56257.8 Da

IEP (calculated)

7.803

GRAVY (calculated)

0.133

Length

514 amino acids

Sequence
(BLAST)

001: MDLSMATGPE DSLLLLLLPA TTLLPPLLAV LLLAASLLWL SPGGPAWALS LCLRPPPGPP GVVTALSSPV AHRVMAALSR SVHGGAALMS FSVGLTRVVV
101: SSRQDTAREI LVNPAFGDRP VKDAARHLLF HRAMGFAPSG DTHWRALRRL AAAHLFGPRR VAASAPHRSS IGARMLGDVA SLMARHGEVA PRRFLHAASL
201: NHVMAVVFGK RYDDFTSQEG ALVEEMVNEG YDLLGTFNWA DHLPFLKWLD LQGVRRRCNR LVRQVEAYVG NIIQEHKARR ASGSGIADEL SGDFVDVLLG
301: LDGEDKMSES DMIAVLWEMI FRGTDTVAIL MEWIMARMVL HPEIQSKARV ELDAVVGRGR AVTDEDVARL PYIQCIVKET LRMHPPGPLL SWARLAVHDA
401: HVGAHLVPAG TTAMVNMWAI AHDAAVWPEP EQFRPERFME EEVSVRGSDL RLAPFGAGRR VCPGKMLALA TVHLWLAQLL HRFEWAPSGS VDLSEHLKMS
501: LEMATPLVCR AVAR

Best Arabidopsis Sequence Match ( AT1G74110.1 )
(BLAST)

001: MTIDMYLSFA SRSGSSPFPS LELCLSIFLF ISLFVFWLTP GGFAWALYKA RFHTRPESKT GPAIPGPSGL PIFGLLLAFV NNALTHRILA NIADTCKAKA
101: LMAFSVGSTR FVITSEPETA KELLNSSAFA DRPVKESAYE LLFDRAMGFA PFGDYWRELR RISSTHLFSP KRIFSSGESR RKIGQNMVGE IKNAMECYGE
201: VHIKKILHFG SLNNVMSSVF GKTYNFNEGI VYSKESNELE HLVSEGYELL GIFNWSDHFP GMRWLDLQGV RRRCRSLVGR VNVFVGKIIN DHKSKRSLRD
301: NPEESTYDDD FVDVLLGMHG NSKLSDSDMI AVLWEMIFRG TDTVAILLEW ILARMVLHPD IQAKAQAEID CIVGDSGRQV TDSDLPKLPY VRAIVKETLR
401: MHPPGPLLSW ARLSIHDTQI GTHFIPAGTT AMVNMWAITH DEKVWPEAHE YKPERFLGAQ ESNNFPIMGS DLRLAPFGAG RRVCPGKSMG LATVELWLAQ
501: LLGSYKWVSC GEVDLSETLK LSLEMKNTLV CKAIPRG

Arabidopsis Description

CYP78A10Cytochrome P450 family protein [Source:UniProtKB/TrEMBL;Acc:Q9C9D1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.