CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68665	Canola	plastid	95.45	95.85
Bra026892.1-P	Field mustard	endoplasmic reticulum	98.14	92.23
CDY36404	Canola	endoplasmic reticulum, plasma membrane	91.32	85.66
CDX98123	Canola	endoplasmic reticulum, plasma membrane	90.91	85.27
AT1G13710.1	Thale cress	endoplasmic reticulum	89.26	83.56
CDY42442	Canola	cytosol	42.77	64.09
GSMUA_Achr5P08920_001	Banana	endoplasmic reticulum, plasma membrane	44.83	58.97
GSMUA_Achr9P26720_001	Banana	endoplasmic reticulum, plasma membrane	50.41	58.94
CDX96516	Canola	endoplasmic reticulum, plasma membrane	64.46	58.87
CDX73053	Canola	extracellular, plasma membrane	64.05	58.49
CDY49134	Canola	endoplasmic reticulum, golgi, plasma membrane	62.81	57.14
GSMUA_Achr1P04470_001	Banana	extracellular, plasma membrane	42.98	56.83
GSMUA_Achr6P34990_001	Banana	endoplasmic reticulum, plasma membrane	48.76	56.32
CDY42443	Canola	endoplasmic reticulum, plasma membrane	52.89	55.41
GSMUA_Achr6P30750_001	Banana	mitochondrion	21.28	54.5
Os03t0603100-00	Rice	plasma membrane	23.55	53.77
KXG39130	Sorghum	endoplasmic reticulum	56.82	52.99
Zm00001d022075_P001	Maize	endoplasmic reticulum	56.41	52.5
Zm00001d029526_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	55.58	52.23
EER97498	Sorghum	endoplasmic reticulum, plasma membrane	55.37	51.84
TraesCS2D01G183000.1	Wheat	endoplasmic reticulum, plasma membrane	54.96	51.75
CDY71495	Canola	mitochondrion	41.94	51.65
TraesCS2B01G201900.1	Wheat	endoplasmic reticulum, plasma membrane	54.96	51.45
Os03t0417700-01	Rice	endoplasmic reticulum	54.55	51.26
TraesCS2A01G175700.1	Wheat	endoplasmic reticulum, plasma membrane	54.34	50.77
Os07t0603700-01	Rice	plasma membrane, plastid	54.34	50.1
HORVU2Hr1G032890.2	Barley	endoplasmic reticulum, plasma membrane	55.17	48.99
CDY27309	Canola	endoplasmic reticulum, golgi	51.45	47.25
CDY41546	Canola	endoplasmic reticulum, plasma membrane	51.45	47.16
CDX80036	Canola	endoplasmic reticulum, plasma membrane, plastid	51.45	47.16
CDY61720	Canola	endoplasmic reticulum, plasma membrane	51.24	47.06
CDY21618	Canola	endoplasmic reticulum	51.86	46.92
Zm00001d047279_P001	Maize	mitochondrion	36.36	46.68
CDX89135	Canola	endoplasmic reticulum, vacuole	51.65	46.64
CDY57871	Canola	endoplasmic reticulum, golgi	51.24	46.53
CDX69873	Canola	endoplasmic reticulum	51.03	46.25
CDX71698	Canola	endoplasmic reticulum, golgi	50.83	46.24
CDY32439	Canola	endoplasmic reticulum	48.35	43.41
CDX90016	Canola	endoplasmic reticulum, golgi, plastid	48.35	43.33
CDY37995	Canola	endoplasmic reticulum	48.14	43.23
CDY15193	Canola	endoplasmic reticulum, golgi, plastid	47.73	42.86
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	23.76	42.75
CDY42441	Canola	endoplasmic reticulum, plasma membrane	14.26	41.07

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	GO:A0A078FTE9	UniProt:A0A078FTE9	EnsemblPlants:CDY16102	ProteinID:CDY16102
ProteinID:CDY16102.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00090519001
InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298
PANTHER:PTHR24298:SF50	SUPFAM:SSF48264	UniParc:UPI0004EE8697	SEG:seg	:	:

Description

BnaC08g40210DBnaC08g40210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTE9]

Coordinates

chrLK032060:-:652657..654519

Molecular Weight (calculated)

54053.5 Da

IEP (calculated)

7.914

GRAVY (calculated)

0.004

Length

484 amino acids

Sequence
(BLAST)

001: MSPEPYVLFF DSLNLSRVSI PGPSGSLAVF SRSHPHRVLA ALAQRFKASH LMAFSVGFSR FVISSEPDTA KEILNSSAFA DRPVKESAYE LLFHRAMGFA
101: PYGEYWRNLR RIASTHLFSP RRIAGFVGVR VGIGMKIVKK IKSVAMSSAG GEVDVKKVIH FGSLNNVMTT VFGESYDFDE VNGDGCFLER LVSEGYELLG
201: IFNWSDHFGV LRWFDFQGVR KRCRALVSEV NTFVGSIIEK HKMKASNNLD GEENDFVDVL LGLQKDEKLS DSDMIAVLWE MIFRGTDTVA ILVEWVLARM
301: VLHQDIQAKL FKEIASVTSN NTRSLSDSDI SKLPYLQAIV KETLRLHPPG PLLSWARLAI HDVNVGPNLI PAGTIAMVNM WSITHDAKIW TDPEEFKPER
401: FTEGEDVSIM GSDLRLAPFG AGRRVCPGKA MGLATVHLWV AQMIQNFEWV KGSCDVDLTE VLKLSMEMKK PLKCKAVPRN VCFG

Best Arabidopsis Sequence Match ( AT1G13710.1 )
(BLAST)

001: MSPEAYVLFF NSFNLVTFEA FASVSLIIAT VAFLLSPGGL AWAWTGSSKS RVSIPGPSGS LSVFSGSNPH RVLAALAKRF KASPLMAFSV GFSRFVISSE
101: PETAKEILSS SAFADRPVKE SAYELLFHRA MGFAPYGEYW RNLRRISSTH LFSPRRIASF EGVRVGIGMK MVKKIKSLVT SDACGEVEVK KIVHFGSLNN
201: VMTTVFGESY DFDEVNGKGC FLERLVSEGY ELLGIFNWSD HFWFLRWFDF QGVRKRCRAL VSEVNTFVGG IIEKHKMKKG NNLNGEENDF VDVLLGLQKD
301: EKLSDSDMIA VLWEMIFRGT DTVAILVEWV LARMVLHQDI QDKLYREIAS ATSNNIRSLS DSDIPKLPYL QAIVKETLRL HPPGPLLSWA RLAIHDVHVG
401: PNLVPAGTIA MVNMWSITHN AKIWTDPEAF MPERFISEDV SIMGSDLRLA PFGSGRRVCP GKAMGLATVH LWIGQLIQNF EWVKGSCDVE LAEVLKLSME
501: MKNPLKCKAV PRNVGFA

Arabidopsis Description

CYP78A5Cytochrome P450 78A5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMX7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.