Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- nucleus 1
- peroxisome 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G201900.1 | Wheat | endoplasmic reticulum, plasma membrane | 75.43 | 76.6 |
| TraesCS2A01G175700.1 | Wheat | endoplasmic reticulum, plasma membrane | 75.05 | 76.06 |
| TraesCS2D01G183000.1 | Wheat | endoplasmic reticulum, plasma membrane | 74.29 | 75.88 |
| EER97498 | Sorghum | endoplasmic reticulum, plasma membrane | 73.9 | 75.05 |
| Zm00001d022075_P001 | Maize | endoplasmic reticulum | 73.52 | 74.23 |
| HORVU2Hr1G032890.2 | Barley | endoplasmic reticulum, plasma membrane | 74.29 | 71.56 |
| Os03t0417700-01 | Rice | endoplasmic reticulum | 68.0 | 69.32 |
| Os03t0603100-00 | Rice | plasma membrane | 25.14 | 62.26 |
| GSMUA_Achr9P26720_001 | Banana | endoplasmic reticulum, plasma membrane | 48.95 | 62.08 |
| GSMUA_Achr6P34990_001 | Banana | endoplasmic reticulum, plasma membrane | 48.57 | 60.86 |
| CDY42442 | Canola | cytosol | 36.57 | 59.44 |
| VIT_01s0011g00350.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 57.14 | 57.92 |
| PGSC0003DMT400063324 | Potato | endoplasmic reticulum | 56.57 | 57.67 |
| Solyc03g114940.2.1 | Tomato | endoplasmic reticulum | 56.0 | 56.98 |
| VIT_17s0000g05110.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 56.38 | 56.38 |
| CDY68665 | Canola | plastid | 50.86 | 55.39 |
| KRH70942 | Soybean | endoplasmic reticulum | 54.1 | 55.04 |
| KRH03164 | Soybean | extracellular, plasma membrane | 55.24 | 54.92 |
| KRH56779 | Soybean | endoplasmic reticulum, plasma membrane | 55.24 | 54.82 |
| KRH75078 | Soybean | endoplasmic reticulum, plasma membrane | 54.29 | 54.81 |
| CDX73053 | Canola | extracellular, plasma membrane | 54.86 | 54.34 |
| CDY16102 | Canola | plastid | 50.1 | 54.34 |
| Bra015934.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 54.67 | 54.15 |
| CDX96516 | Canola | endoplasmic reticulum, plasma membrane | 54.67 | 54.15 |
| KRG96915 | Soybean | endoplasmic reticulum | 53.14 | 54.07 |
| CDY49134 | Canola | endoplasmic reticulum, golgi, plasma membrane | 54.1 | 53.38 |
| Bra008134.1-P | Field mustard | endoplasmic reticulum, golgi | 53.9 | 53.2 |
| CDY36404 | Canola | endoplasmic reticulum, plasma membrane | 52.0 | 52.91 |
| Bra026892.1-P | Field mustard | endoplasmic reticulum | 51.43 | 52.43 |
| CDX98123 | Canola | endoplasmic reticulum, plasma membrane | 51.43 | 52.33 |
| AT1G13710.1 | Thale cress | endoplasmic reticulum | 51.43 | 52.22 |
| CDY42443 | Canola | endoplasmic reticulum, plasma membrane | 45.9 | 52.16 |
| AT1G74110.1 | Thale cress | plastid | 53.14 | 51.96 |
| Bra040720.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 51.05 | 51.94 |
| GSMUA_Achr6P30750_001 | Banana | mitochondrion | 18.1 | 50.26 |
| Os10t0403000-01 | Rice | endoplasmic reticulum, plasma membrane | 51.43 | 48.65 |
| Os09t0528700-00 | Rice | endoplasmic reticulum, plasma membrane, plastid | 50.67 | 48.1 |
| Os08t0547300-01 | Rice | endoplasmic reticulum, plasma membrane, plastid | 47.81 | 45.55 |
| Os11t0489250-00 | Rice | endoplasmic reticulum | 46.48 | 45.35 |
| Os03t0134500-00 | Rice | endoplasmic reticulum | 47.24 | 45.34 |
| CDY42441 | Canola | endoplasmic reticulum, plasma membrane | 12.19 | 38.1 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EMBL:AB780362 | ProteinID:BAC83866.1 | ProteinID:BAC84484.1 | ProteinID:BAF22129.1 |
| ProteinID:BAT02541.1 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0016709 |
| GO:GO:0019748 | GO:GO:0020037 | GO:GO:0044550 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036396 |
| EnsemblPlantsGene:Os07g0603700 | EnsemblPlants:Os07t0603700-01 | PFAM:PF00067 | PRINTS:PR00385 | PRINTS:PR00463 | ScanProsite:PS00086 |
| PANTHER:PTHR24298 | PANTHER:PTHR24298:SF50 | UniProt:Q6YVW3 | SUPFAM:SSF48264 | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI00001BF4A1 | SEG:seg | : | : | : | : |
Description
GIANT EMBRYO 1CYP78A13 (Cytochrome P450), Size control between embryo and endosperm (Os07t0603700-01)
Coordinates
chr7:+:24713778..24715813
Molecular Weight (calculated)
55894.3 Da
IEP (calculated)
8.677
GRAVY (calculated)
0.212
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSSMAAAQ ESSLLLFLLP TSAASVFPPL ISVVVLAALL LWLSPGGPAW ALSRCRGTPP PPGVAGGAAS ALSGPAAHRV LAGISRAVEG GAAVMSLSVG
101: LTRLVVASRP ETAREILVSP AFGDRPVKDA ARQLLFHRAM GFAPSGDAHW RGLRRASAAH LFGPRRVAGS APEREAIGAR IVGDVASLMS RRGEVPLRRV
201: LHAASLGHVM ATVFGKRHGD ISIQDGELLE EMVTEGYDLL GKFNWADHLP LLRWLDLQGI RRRCNRLVQK VEVFVGKIIQ EHKAKRAAGG VAVADGVLGD
301: FVDVLLDLQG EEKMSDSDMI AVLWEMIFRG TDTVAILMEW VMARMVMHPE IQAKAQAEVD AAVGGRRGRV ADGDVASLPY IQSIVKETLR MHPPGPLLSW
401: ARLAVHDARV GGHAVPAGTT AMVNMWAIAH DAAVWPEPDA FRPERFSEGE DVGVLGGDLR LAPFGAGRRV CPGRMLALAT AHLWLAQLLH AFDWSPTAAG
501: VDLSERLGMS LEMAAPLVCK AVARA
101: LTRLVVASRP ETAREILVSP AFGDRPVKDA ARQLLFHRAM GFAPSGDAHW RGLRRASAAH LFGPRRVAGS APEREAIGAR IVGDVASLMS RRGEVPLRRV
201: LHAASLGHVM ATVFGKRHGD ISIQDGELLE EMVTEGYDLL GKFNWADHLP LLRWLDLQGI RRRCNRLVQK VEVFVGKIIQ EHKAKRAAGG VAVADGVLGD
301: FVDVLLDLQG EEKMSDSDMI AVLWEMIFRG TDTVAILMEW VMARMVMHPE IQAKAQAEVD AAVGGRRGRV ADGDVASLPY IQSIVKETLR MHPPGPLLSW
401: ARLAVHDARV GGHAVPAGTT AMVNMWAIAH DAAVWPEPDA FRPERFSEGE DVGVLGGDLR LAPFGAGRRV CPGRMLALAT AHLWLAQLLH AFDWSPTAAG
501: VDLSERLGMS LEMAAPLVCK AVARA
001: MTIDMYLSFA SRSGSSPFPS LELCLSIFLF ISLFVFWLTP GGFAWALYKA RFHTRPESKT GPAIPGPSGL PIFGLLLAFV NNALTHRILA NIADTCKAKA
101: LMAFSVGSTR FVITSEPETA KELLNSSAFA DRPVKESAYE LLFDRAMGFA PFGDYWRELR RISSTHLFSP KRIFSSGESR RKIGQNMVGE IKNAMECYGE
201: VHIKKILHFG SLNNVMSSVF GKTYNFNEGI VYSKESNELE HLVSEGYELL GIFNWSDHFP GMRWLDLQGV RRRCRSLVGR VNVFVGKIIN DHKSKRSLRD
301: NPEESTYDDD FVDVLLGMHG NSKLSDSDMI AVLWEMIFRG TDTVAILLEW ILARMVLHPD IQAKAQAEID CIVGDSGRQV TDSDLPKLPY VRAIVKETLR
401: MHPPGPLLSW ARLSIHDTQI GTHFIPAGTT AMVNMWAITH DEKVWPEAHE YKPERFLGAQ ESNNFPIMGS DLRLAPFGAG RRVCPGKSMG LATVELWLAQ
501: LLGSYKWVSC GEVDLSETLK LSLEMKNTLV CKAIPRG
101: LMAFSVGSTR FVITSEPETA KELLNSSAFA DRPVKESAYE LLFDRAMGFA PFGDYWRELR RISSTHLFSP KRIFSSGESR RKIGQNMVGE IKNAMECYGE
201: VHIKKILHFG SLNNVMSSVF GKTYNFNEGI VYSKESNELE HLVSEGYELL GIFNWSDHFP GMRWLDLQGV RRRCRSLVGR VNVFVGKIIN DHKSKRSLRD
301: NPEESTYDDD FVDVLLGMHG NSKLSDSDMI AVLWEMIFRG TDTVAILLEW ILARMVLHPD IQAKAQAEID CIVGDSGRQV TDSDLPKLPY VRAIVKETLR
401: MHPPGPLLSW ARLSIHDTQI GTHFIPAGTT AMVNMWAITH DEKVWPEAHE YKPERFLGAQ ESNNFPIMGS DLRLAPFGAG RRVCPGKSMG LATVELWLAQ
501: LLGSYKWVSC GEVDLSETLK LSLEMKNTLV CKAIPRG
Arabidopsis Description
CYP78A10Cytochrome P450 family protein [Source:UniProtKB/TrEMBL;Acc:Q9C9D1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.