Factsheet for PGSC0003DMT400063324

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g114940.2.1	Tomato	endoplasmic reticulum	94.17	93.99
VIT_17s0000g05110.t01	Wine grape	endoplasmic reticulum, plasma membrane	75.73	74.29
KRH03164	Soybean	extracellular, plasma membrane	71.46	69.7
KRH56779	Soybean	endoplasmic reticulum, plasma membrane	70.68	68.81
Bra015934.1-P	Field mustard	endoplasmic reticulum, plasma membrane	68.16	66.23
CDX96516	Canola	endoplasmic reticulum, plasma membrane	68.16	66.23
CDX73053	Canola	extracellular, plasma membrane	67.57	65.66
GSMUA_Achr5P08920_001	Banana	endoplasmic reticulum, plasma membrane	46.8	65.49
AT1G74110.1	Thale cress	plastid	67.96	65.18
GSMUA_Achr6P34990_001	Banana	endoplasmic reticulum, plasma membrane	52.82	64.92
GSMUA_Achr9P26720_001	Banana	endoplasmic reticulum, plasma membrane	51.84	64.49
CDY49134	Canola	endoplasmic reticulum, golgi, plasma membrane	66.6	64.47
Bra008134.1-P	Field mustard	endoplasmic reticulum, golgi	66.21	64.1
GSMUA_Achr1P04470_001	Banana	extracellular, plasma membrane	45.24	63.66
CDY42443	Canola	endoplasmic reticulum, plasma membrane	56.5	62.99
PGSC0003DMT400074847	Potato	mitochondrion	51.46	60.64
PGSC0003DMT400014094	Potato	cytosol	27.96	60.5
GSMUA_Achr6P30750_001	Banana	mitochondrion	21.55	58.73
Zm00001d029526_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	58.45	58.45
EER97498	Sorghum	endoplasmic reticulum, plasma membrane	58.45	58.22
Zm00001d022075_P001	Maize	endoplasmic reticulum	58.25	57.69
TraesCS2B01G201900.1	Wheat	endoplasmic reticulum, plasma membrane	57.86	57.64
TraesCS2D01G183000.1	Wheat	endoplasmic reticulum, plasma membrane	57.48	57.59
Os03t0603100-00	Rice	plasma membrane	23.69	57.55
KXG39130	Sorghum	endoplasmic reticulum	57.48	57.03
TraesCS2A01G175700.1	Wheat	endoplasmic reticulum, plasma membrane	57.09	56.76
Os07t0603700-01	Rice	plasma membrane, plastid	57.67	56.57
Os03t0417700-01	Rice	endoplasmic reticulum	56.12	56.12
PGSC0003DMT400000685	Potato	cytosol	47.57	55.94
PGSC0003DMT400035609	Potato	mitochondrion	46.99	55.25
HORVU2Hr1G032890.2	Barley	endoplasmic reticulum, plasma membrane	57.67	54.5
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	27.18	52.04
Zm00001d047279_P001	Maize	mitochondrion	35.92	49.07
PGSC0003DMT400042702	Potato	endoplasmic reticulum, plasma membrane, plastid	48.16	45.67
PGSC0003DMT400043673	Potato	endoplasmic reticulum	47.57	45.62

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102585692	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:M1CAH2
PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400024630	PGSC:PGSC0003DMG400024630	EnsemblPlants:PGSC0003DMT400063324	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF50	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI000294A5B7
RefSeq:XP_006345108.1	SEG:seg	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400024630]

Coordinates

chr3:-:54892291..54894660

Molecular Weight (calculated)

58083.7 Da

IEP (calculated)

6.920

GRAVY (calculated)

0.113

Length

515 amino acids

Sequence
(BLAST)

001: MYSEYSLLFI PSTVVLNLEL LFFFLLFLAV FAFWLTPGGL AWSFSKARVS IPGPSGLPVL GLVLTFTGSL THRLLAKISN GLKAESLMAF SVGFTRFIIS
101: SNPETAKEIL NSSAFADRPV KESAYELLFH RAMGFAPYGE YWRNLRRISA THLFSPKRIA CFGDFRSEIG RKMVTEIASL METDGHVKVK RVLHFGSLNN
201: VMKTVFGKSY DFNGEDGREL EYLVSEGYEL LGIFNWSDHF PLLGWLDLQG VRRRCKELVA RVNIFVGKII QQHRLNRVKN AGNVADECFH DFVDVLLDLE
301: KENKLSDSDM IAVLWEMIFR GTDTVAILLE WILARMVLHP DIQAKVQSEI NTVVGTDRAV CDSDLPNLQY LLATVKETLR VHPPGPLLSW ARLAIHDTSV
401: GHHFIPAGTT AMVNMWAITH DEKIWSQPEE FMPERFLEED VAIMGSDLRL APFGSGRRVC PGKAMGLATV QLWLAQLLQE FKWVPSDNGV DLSECLRLSL
501: EMKQPLICKA VSRVH

Best Arabidopsis Sequence Match ( AT1G74110.1 )
(BLAST)

001: MTIDMYLSFA SRSGSSPFPS LELCLSIFLF ISLFVFWLTP GGFAWALYKA RFHTRPESKT GPAIPGPSGL PIFGLLLAFV NNALTHRILA NIADTCKAKA
101: LMAFSVGSTR FVITSEPETA KELLNSSAFA DRPVKESAYE LLFDRAMGFA PFGDYWRELR RISSTHLFSP KRIFSSGESR RKIGQNMVGE IKNAMECYGE
201: VHIKKILHFG SLNNVMSSVF GKTYNFNEGI VYSKESNELE HLVSEGYELL GIFNWSDHFP GMRWLDLQGV RRRCRSLVGR VNVFVGKIIN DHKSKRSLRD
301: NPEESTYDDD FVDVLLGMHG NSKLSDSDMI AVLWEMIFRG TDTVAILLEW ILARMVLHPD IQAKAQAEID CIVGDSGRQV TDSDLPKLPY VRAIVKETLR
401: MHPPGPLLSW ARLSIHDTQI GTHFIPAGTT AMVNMWAITH DEKVWPEAHE YKPERFLGAQ ESNNFPIMGS DLRLAPFGAG RRVCPGKSMG LATVELWLAQ
501: LLGSYKWVSC GEVDLSETLK LSLEMKNTLV CKAIPRG

Arabidopsis Description

CYP78A10Cytochrome P450 family protein [Source:UniProtKB/TrEMBL;Acc:Q9C9D1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.