Factsheet for PGSC0003DMT400042702

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

cytosol 1
nucleus 1
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	29.1	71.49
VIT_07s0031g01570.t01	Wine grape	extracellular, plasma membrane	70.53	71.06
AT5G09970.1	Thale cress	endoplasmic reticulum	63.54	64.37
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	50.28	64.08
CDY21618	Canola	endoplasmic reticulum	62.98	63.93
Bra009070.1-P	Field mustard	endoplasmic reticulum	62.8	63.86
CDX69873	Canola	endoplasmic reticulum	62.62	63.67
PGSC0003DMT400043673	Potato	endoplasmic reticulum	62.06	62.76
EER91649	Sorghum	endoplasmic reticulum, plasma membrane	62.43	61.41
Zm00001d033020_P001	Maize	endoplasmic reticulum	61.51	60.95
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	37.57	58.79
Os10t0403000-01	Rice	endoplasmic reticulum, plasma membrane	59.3	58.02
PGSC0003DMT400014094	Potato	cytosol	24.68	56.3
PGSC0003DMT400000685	Potato	cytosol	42.91	53.2
PGSC0003DMT400035609	Potato	mitochondrion	41.8	51.83
PGSC0003DMT400074847	Potato	mitochondrion	41.25	51.26
PGSC0003DMT400063324	Potato	endoplasmic reticulum	45.67	48.16

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102599995	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:M1BDI8
PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400016571	PGSC:PGSC0003DMG400016571	EnsemblPlants:PGSC0003DMT400042702	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF202	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI0002961957
RefSeq:XP_006362805.1	:	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400016571]

Coordinates

chr4:-:54151227..54153016

Molecular Weight (calculated)

60652.6 Da

IEP (calculated)

6.455

GRAVY (calculated)

0.046

Length

543 amino acids

Sequence
(BLAST)

001: MDLGMVTKDS NWWVFTLPTF LGWKILLDEY VILYIILAFI SITLITWAST PGGVAWKNNT TNISSGPGRN ISGPRGFPII GSLFTLSHDG LAHRTLATAA
101: WSHKAKQLMA FSLGSTPLVV SSDPQIAKEI LTSPHFADRP IKQSAKSLMF SRAIGFAPNG TYWRLLRRIA SSYLFSPSRI AAHETSRQLD CSVMLRNIVN
201: DQIENGKVVL RTHLQFAALN NIMGSVFGKR YDNVDGKLEL GELQDMVKEG FELLGAFNWS DYLPWLSLFY DPSGIVRRSE ALVPRVRKFV LDIIDEHKRC
301: RTSASKMVMT DNGDFLDVLL SLDGEEKLDE DDMVAVLWEM IFRGTDTTAL LTEWVMAELV LHPEVQNKLR QEVDNVTMGQ VVTDVDVVRM PYLQAVIKET
401: LRVHPPGPLL SWARLSTSDV LLSNGMVVPS HTTAMVNMWA ITHDSDVWEN PLEFKPERFV VSEGGVNVDV RGGDLRLAPF GAGRRVCPGK NLGLVTVMLW
501: VAKLVQHFEF VEDGAHPVDL GEVLKLSCEM KNPLTVVAMQ RNV

Best Arabidopsis Sequence Match ( AT5G09970.1 )
(BLAST)

001: MELMNLASKE TSYWMIALPA GFGSQNLHDV STLGYLFLAV VFLSIVTWAL AGGGGVAWKN GRNRLGRVAI PGPRGIPVFG SLFTLSRGLA HRTLAAMAWS
101: RANTEIMAFS LGSTPVIVAS EPNIAREILM SPHFADRPVK QSAKSLMFSR AIGFAPNGTY WRMLRRIAST HLFAPRRILA HEAGRQLDCA EMVKAVSVEQ
201: NGAGSVVLRK HLQLAALNNI MGSVFGRRYD PLAQKEDLDE LTSMVREGFE LLGAFNWSDY LPWLGYFYDS IRLNQRCSDL VPRIRTLVKK IIDEHRVSNS
301: EKKRDIGDFV DVLLSLDGDE KLQEDDMIAV LWEMIFRGTD TTALLTEWTM AELVLNPNVQ TKLRDEILTA VGDGADGDVA DADLAKLPYL NAVVKETLRL
401: HPPGPLLSWA RLSTSDVQLS NGMVIPKGTT AMVNMWAITH DQTVWSDPLK FDPERFTGNA DMDIRGGDLR LAPFGAGRRV CPGKNMGLAT VTRWVAELVR
501: RFEWGQDQTE PVDLGEVLKL SCEMEHPLRA VVTEIF

Arabidopsis Description

CYP78A7Cytochrome P450 78A7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIB0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.