Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 1
- endoplasmic reticulum 4
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009070.1-P | Field mustard | endoplasmic reticulum | 89.93 | 90.26 |
| CDX69873 | Canola | endoplasmic reticulum | 89.74 | 90.07 |
| CDY21618 | Canola | endoplasmic reticulum | 89.18 | 89.35 |
| VIT_07s0031g01570.t01 | Wine grape | extracellular, plasma membrane | 69.03 | 68.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 27.43 | 66.52 |
| PGSC0003DMT400042702 | Potato | endoplasmic reticulum, plasma membrane, plastid | 64.37 | 63.54 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 50.19 | 63.15 |
| EER91649 | Sorghum | endoplasmic reticulum, plasma membrane | 62.31 | 60.51 |
| Zm00001d033020_P001 | Maize | endoplasmic reticulum | 60.82 | 59.49 |
| Os10t0403000-01 | Rice | endoplasmic reticulum, plasma membrane | 60.82 | 58.74 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane | 36.38 | 56.2 |
| AT2G46660.1 | Thale cress | endoplasmic reticulum, plasma membrane | 48.13 | 48.68 |
| AT1G13710.1 | Thale cress | endoplasmic reticulum | 46.08 | 47.78 |
| AT3G61880.2 | Thale cress | endoplasmic reticulum | 49.25 | 47.57 |
| AT1G74110.1 | Thale cress | plastid | 46.64 | 46.55 |
| AT1G01190.2 | Thale cress | endoplasmic reticulum, golgi | 46.46 | 46.11 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EntrezGene:830858 | ProteinID:AED91472.1 | EMBL:AK227001 | ArrayExpress:AT5G09970 |
| EnsemblPlantsGene:AT5G09970 | RefSeq:AT5G09970 | TAIR:AT5G09970 | RefSeq:AT5G09970-TAIR-G | EnsemblPlants:AT5G09970.1 | TAIR:AT5G09970.1 |
| EMBL:AY136401 | Unigene:At.32431 | ProteinID:BAB09418.1 | EMBL:BT000225 | Symbol:CYP78A7 | InterPro:Cyt_P450 |
| InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009653 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016705 |
| GO:GO:0016709 | GO:GO:0019748 | GO:GO:0020037 | GO:GO:0040007 | GO:GO:0040008 | GO:GO:0044550 |
| GO:GO:0046872 | GO:GO:0055114 | GO:GO:0090709 | InterPro:IPR036396 | RefSeq:NP_196559.1 | PFAM:PF00067 |
| PO:PO:0000017 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0006344 | PO:PO:0007611 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009046 | PRINTS:PR00385 | PRINTS:PR00463 | ScanProsite:PS00086 |
| PANTHER:PTHR24298 | PANTHER:PTHR24298:SF202 | UniProt:Q9FIB0 | SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI00000AC21D |
| SEG:seg | : | : | : | : | : |
Description
CYP78A7Cytochrome P450 78A7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIB0]
Coordinates
chr5:+:3111945..3114239
Molecular Weight (calculated)
59497.0 Da
IEP (calculated)
6.686
GRAVY (calculated)
-0.040
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MELMNLASKE TSYWMIALPA GFGSQNLHDV STLGYLFLAV VFLSIVTWAL AGGGGVAWKN GRNRLGRVAI PGPRGIPVFG SLFTLSRGLA HRTLAAMAWS
101: RANTEIMAFS LGSTPVIVAS EPNIAREILM SPHFADRPVK QSAKSLMFSR AIGFAPNGTY WRMLRRIAST HLFAPRRILA HEAGRQLDCA EMVKAVSVEQ
201: NGAGSVVLRK HLQLAALNNI MGSVFGRRYD PLAQKEDLDE LTSMVREGFE LLGAFNWSDY LPWLGYFYDS IRLNQRCSDL VPRIRTLVKK IIDEHRVSNS
301: EKKRDIGDFV DVLLSLDGDE KLQEDDMIAV LWEMIFRGTD TTALLTEWTM AELVLNPNVQ TKLRDEILTA VGDGADGDVA DADLAKLPYL NAVVKETLRL
401: HPPGPLLSWA RLSTSDVQLS NGMVIPKGTT AMVNMWAITH DQTVWSDPLK FDPERFTGNA DMDIRGGDLR LAPFGAGRRV CPGKNMGLAT VTRWVAELVR
501: RFEWGQDQTE PVDLGEVLKL SCEMEHPLRA VVTEIF
101: RANTEIMAFS LGSTPVIVAS EPNIAREILM SPHFADRPVK QSAKSLMFSR AIGFAPNGTY WRMLRRIAST HLFAPRRILA HEAGRQLDCA EMVKAVSVEQ
201: NGAGSVVLRK HLQLAALNNI MGSVFGRRYD PLAQKEDLDE LTSMVREGFE LLGAFNWSDY LPWLGYFYDS IRLNQRCSDL VPRIRTLVKK IIDEHRVSNS
301: EKKRDIGDFV DVLLSLDGDE KLQEDDMIAV LWEMIFRGTD TTALLTEWTM AELVLNPNVQ TKLRDEILTA VGDGADGDVA DADLAKLPYL NAVVKETLRL
401: HPPGPLLSWA RLSTSDVQLS NGMVIPKGTT AMVNMWAITH DQTVWSDPLK FDPERFTGNA DMDIRGGDLR LAPFGAGRRV CPGKNMGLAT VTRWVAELVR
501: RFEWGQDQTE PVDLGEVLKL SCEMEHPLRA VVTEIF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.