Factsheet for AT1G13710.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
plastid 1
extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98123	Canola	endoplasmic reticulum, plasma membrane	90.91	91.09
Bra040720.1-P	Field mustard	endoplasmic reticulum, plasma membrane	90.52	90.7
CDY36404	Canola	endoplasmic reticulum, plasma membrane	89.94	90.12
CDY68665	Canola	plastid	83.95	90.04
CDY16102	Canola	plastid	83.56	89.26
Bra026892.1-P	Field mustard	endoplasmic reticulum	88.59	88.93
VIT_01s0011g00350.t01	Wine grape	endoplasmic reticulum, plasma membrane	66.54	66.41
KRH70942	Soybean	endoplasmic reticulum	63.64	63.76
KRG96915	Soybean	endoplasmic reticulum	63.44	63.57
KRH75078	Soybean	endoplasmic reticulum, plasma membrane	63.83	63.46
GSMUA_Achr9P26720_001	Banana	endoplasmic reticulum, plasma membrane	49.13	61.35
GSMUA_Achr5P08920_001	Banana	endoplasmic reticulum, plasma membrane	43.13	60.6
AT1G74110.1	Thale cress	plastid	60.73	58.47
GSMUA_Achr6P34990_001	Banana	endoplasmic reticulum, plasma membrane	47.39	58.47
GSMUA_Achr1P04470_001	Banana	extracellular, plasma membrane	41.2	58.2
GSMUA_Achr6P30750_001	Banana	mitochondrion	20.5	56.08
KXG39130	Sorghum	endoplasmic reticulum	54.55	54.34
Zm00001d029526_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	53.38	53.59
Zm00001d022075_P001	Maize	endoplasmic reticulum	53.58	53.27
EER97498	Sorghum	endoplasmic reticulum, plasma membrane	53.0	53.0
TraesCS2D01G183000.1	Wheat	endoplasmic reticulum, plasma membrane	52.61	52.92
TraesCS2B01G201900.1	Wheat	endoplasmic reticulum, plasma membrane	52.61	52.61
Os03t0603100-00	Rice	plasma membrane	21.47	52.36
Os03t0417700-01	Rice	endoplasmic reticulum	52.03	52.23
TraesCS2A01G175700.1	Wheat	endoplasmic reticulum, plasma membrane	52.03	51.93
Os07t0603700-01	Rice	plasma membrane, plastid	52.22	51.43
HORVU2Hr1G032890.2	Barley	endoplasmic reticulum, plasma membrane	52.42	49.72
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	24.76	47.58
AT2G46660.1	Thale cress	endoplasmic reticulum, plasma membrane	48.55	47.36
Zm00001d047279_P001	Maize	mitochondrion	33.66	46.15
AT5G09970.1	Thale cress	endoplasmic reticulum	47.78	46.08
AT3G61880.2	Thale cress	endoplasmic reticulum	48.55	45.23
AT1G01190.2	Thale cress	endoplasmic reticulum, golgi	46.23	44.26

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	EntrezGene:837932	UniProt:A0A178WF71	ProteinID:AAF81298.1	ProteinID:AEE29060.1
ArrayExpress:AT1G13710	EnsemblPlantsGene:AT1G13710	RefSeq:AT1G13710	TAIR:AT1G13710	RefSeq:AT1G13710-TAIR-G	EnsemblPlants:AT1G13710.1
TAIR:AT1G13710.1	Unigene:At.42013	EMBL:BT022025	EMBL:BT029218	Symbol:CYP78A5	InterPro:Cyt_P450
InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008284
GO:GO:0009058	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0035265
GO:GO:0040007	GO:GO:0040008	GO:GO:0040009	GO:GO:0044550	GO:GO:0046622	GO:GO:0046872
GO:GO:0048437	GO:GO:0055114	InterPro:IPR036396	RefSeq:NP_172827.1	ProteinID:OAP16774.1	PFAM:PF00067
PO:PO:0000017	PO:PO:0000037	PO:PO:0001078	PO:PO:0001081	PO:PO:0004507	PO:PO:0006344
PO:PO:0007611	PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009031
PO:PO:0009046	PO:PO:0025022	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298
PANTHER:PTHR24298:SF50	UniProt:Q9LMX7	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI00000AA7AB	:

Description

CYP78A5Cytochrome P450 78A5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMX7]

Coordinates

chr1:-:4702657..4704694

Molecular Weight (calculated)

57647.0 Da

IEP (calculated)

8.565

GRAVY (calculated)

0.072

Length

517 amino acids

Sequence
(BLAST)

001: MSPEAYVLFF NSFNLVTFEA FASVSLIIAT VAFLLSPGGL AWAWTGSSKS RVSIPGPSGS LSVFSGSNPH RVLAALAKRF KASPLMAFSV GFSRFVISSE
101: PETAKEILSS SAFADRPVKE SAYELLFHRA MGFAPYGEYW RNLRRISSTH LFSPRRIASF EGVRVGIGMK MVKKIKSLVT SDACGEVEVK KIVHFGSLNN
201: VMTTVFGESY DFDEVNGKGC FLERLVSEGY ELLGIFNWSD HFWFLRWFDF QGVRKRCRAL VSEVNTFVGG IIEKHKMKKG NNLNGEENDF VDVLLGLQKD
301: EKLSDSDMIA VLWEMIFRGT DTVAILVEWV LARMVLHQDI QDKLYREIAS ATSNNIRSLS DSDIPKLPYL QAIVKETLRL HPPGPLLSWA RLAIHDVHVG
401: PNLVPAGTIA MVNMWSITHN AKIWTDPEAF MPERFISEDV SIMGSDLRLA PFGSGRRVCP GKAMGLATVH LWIGQLIQNF EWVKGSCDVE LAEVLKLSME
501: MKNPLKCKAV PRNVGFA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.