Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 4
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27309 | Canola | endoplasmic reticulum, golgi | 88.49 | 88.99 |
| Bra039267.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid | 88.11 | 88.61 |
| CDY61720 | Canola | endoplasmic reticulum, plasma membrane | 87.92 | 88.42 |
| CDX80036 | Canola | endoplasmic reticulum, plasma membrane, plastid | 87.92 | 88.26 |
| Bra004517.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid | 87.74 | 88.07 |
| CDY41546 | Canola | endoplasmic reticulum, plasma membrane | 87.74 | 88.07 |
| AT3G61880.2 | Thale cress | endoplasmic reticulum | 81.32 | 77.66 |
| PGSC0003DMT400000685 | Potato | cytosol | 57.55 | 69.63 |
| PGSC0003DMT400014094 | Potato | cytosol | 30.94 | 68.91 |
| VIT_15s0048g02900.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 67.92 | 67.54 |
| KRG97225 | Soybean | endoplasmic reticulum, golgi, plastid | 65.47 | 66.35 |
| AT1G01190.2 | Thale cress | endoplasmic reticulum, golgi | 67.55 | 66.3 |
| VIT_02s0025g02570.t01 | Wine grape | endoplasmic reticulum, golgi | 65.47 | 65.97 |
| OQU75572 | Sorghum | mitochondrion | 33.02 | 65.79 |
| PGSC0003DMT400035609 | Potato | mitochondrion | 53.77 | 65.07 |
| Solyc01g096280.1.1 | Tomato | endoplasmic reticulum, golgi | 66.04 | 65.06 |
| KRH06409 | Soybean | extracellular, plasma membrane | 64.72 | 63.99 |
| KRH47844 | Soybean | endoplasmic reticulum, golgi, plastid | 65.09 | 63.65 |
| Solyc10g009310.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 63.02 | 63.62 |
| Solyc05g047680.2.1 | Tomato | endoplasmic reticulum, golgi | 60.19 | 60.08 |
| GSMUA_Achr2P03370_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 51.13 | 59.43 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane, plastid | 45.47 | 58.5 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 52.26 | 58.19 |
| TraesCS5A01G316600.1 | Wheat | endoplasmic reticulum | 58.3 | 57.87 |
| TraesCS7B01G168800.1 | Wheat | plastid | 60.19 | 57.79 |
| OQU80753 | Sorghum | endoplasmic reticulum | 59.25 | 57.61 |
| TraesCS7D01G271100.1 | Wheat | endoplasmic reticulum, plasma membrane | 60.0 | 57.61 |
| Zm00001d053202_P001 | Maize | endoplasmic reticulum | 58.68 | 57.27 |
| TraesCS5D01G322900.1 | Wheat | endoplasmic reticulum | 58.11 | 57.25 |
| TraesCS7A01G270700.1 | Wheat | endoplasmic reticulum, plasma membrane | 59.25 | 57.19 |
| TraesCS5B01G317200.1 | Wheat | endoplasmic reticulum | 57.92 | 57.06 |
| HORVU7Hr1G057100.2 | Barley | endoplasmic reticulum, plasma membrane | 59.06 | 57.01 |
| Os09t0528700-00 | Rice | endoplasmic reticulum, plasma membrane, plastid | 59.43 | 56.96 |
| GSMUA_Achr1P07820_001 | Banana | endoplasmic reticulum, golgi, plastid | 45.85 | 56.64 |
| Os08t0547300-01 | Rice | endoplasmic reticulum, plasma membrane, plastid | 58.68 | 56.44 |
| Zm00001d032042_P001 | Maize | endoplasmic reticulum | 58.49 | 55.66 |
| GSMUA_Achr11P... | Banana | plastid | 54.91 | 55.53 |
| EER99230 | Sorghum | endoplasmic reticulum | 57.55 | 55.35 |
| HORVU5Hr1G081060.2 | Barley | mitochondrion | 58.49 | 55.16 |
| Zm00001d006193_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 57.17 | 54.01 |
| TraesCS5A01G502000.1 | Wheat | endoplasmic reticulum | 54.91 | 52.53 |
| TraesCS4D01G327400.1 | Wheat | endoplasmic reticulum | 54.53 | 52.36 |
| Os03t0134500-00 | Rice | endoplasmic reticulum | 53.77 | 52.1 |
| EER92912 | Sorghum | endoplasmic reticulum | 53.96 | 52.09 |
| Zm00001d027537_P001 | Maize | endoplasmic reticulum | 53.58 | 52.01 |
| HORVU4Hr1G081210.1 | Barley | endoplasmic reticulum, plasma membrane | 54.15 | 51.62 |
| AT1G13710.1 | Thale cress | endoplasmic reticulum | 47.36 | 48.55 |
| AT1G74110.1 | Thale cress | plastid | 48.87 | 48.23 |
| AT5G09970.1 | Thale cress | endoplasmic reticulum | 48.68 | 48.13 |
| TraesCS4B01G330500.1 | Wheat | mitochondrion | 53.96 | 47.67 |
| HORVU5Hr1G057180.2 | Barley | cytosol | 33.21 | 44.78 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EntrezGene:819278 | ProteinID:AAC69923.1 | ProteinID:AAM15240.1 | ProteinID:AEC10736.1 |
| EMBL:AK226763 | ArrayExpress:AT2G46660 | EnsemblPlantsGene:AT2G46660 | RefSeq:AT2G46660 | TAIR:AT2G46660 | RefSeq:AT2G46660-TAIR-G |
| EnsemblPlants:AT2G46660.1 | TAIR:AT2G46660.1 | Unigene:At.36480 | Symbol:CYP78A6 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS |
| InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009791 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016705 |
| GO:GO:0016709 | GO:GO:0019748 | GO:GO:0020037 | GO:GO:0040007 | GO:GO:0040008 | GO:GO:0044550 |
| GO:GO:0046872 | GO:GO:0048316 | GO:GO:0055114 | InterPro:IPR036396 | RefSeq:NP_182189.1 | PFAM:PF00067 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001185 | PO:PO:0007611 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 | PRINTS:PR00385 |
| PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF46 | UniProt:Q9ZNR0 | SUPFAM:SSF48264 |
| TMHMM:TMhelix | UniParc:UPI000009D5AA | : | : | : | : |
Description
CYP78A6Cytochrome P450 78A6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNR0]
Coordinates
chr2:-:19153328..19155579
Molecular Weight (calculated)
59568.4 Da
IEP (calculated)
8.291
GRAVY (calculated)
-0.030
Length
530 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKLESSLI FALLSKCSVL SQTNLAFSLL AVTIIWLAIS LFLWTYPGGP AWGKYLFGRL ISGSYKTGNV IPGPKGFPLV GSMSLMSSTL AHRRIADAAE
101: KFGAKRLMAF SLGETRVIVT CNPDVAKEIL NSPVFADRPV KESAYSLMFN RAIGFAPHGV YWRTLRRIAS NHLFSTKQIR RAETQRRVIS SQMVEFLEKQ
201: SSNEPCFVRE LLKTASLNNM MCSVFGQEYE LEKNHVELRE MVEEGYDLLG TLNWTDHLPW LSEFDPQRLR SRCSTLVPKV NRFVSRIISE HRNQTGDLPR
301: DFVDVLLSLH GSDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DMQSTVQNEL DQVVGKSRAL DESDLASLPY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTIV DGRLVPAGTT AMVNMWAVSH DPHVWVDPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRICPGKNLG FTTVMFWTAM MLHEFEWGPS
501: DGNGVDLSEK LRLSCEMANP LPAKLRRRRS
101: KFGAKRLMAF SLGETRVIVT CNPDVAKEIL NSPVFADRPV KESAYSLMFN RAIGFAPHGV YWRTLRRIAS NHLFSTKQIR RAETQRRVIS SQMVEFLEKQ
201: SSNEPCFVRE LLKTASLNNM MCSVFGQEYE LEKNHVELRE MVEEGYDLLG TLNWTDHLPW LSEFDPQRLR SRCSTLVPKV NRFVSRIISE HRNQTGDLPR
301: DFVDVLLSLH GSDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DMQSTVQNEL DQVVGKSRAL DESDLASLPY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTIV DGRLVPAGTT AMVNMWAVSH DPHVWVDPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRICPGKNLG FTTVMFWTAM MLHEFEWGPS
501: DGNGVDLSEK LRLSCEMANP LPAKLRRRRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.