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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 6
  • vacuole 3
  • plasma membrane 4
  • golgi 3
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d006193_P001 Maize endoplasmic reticulum, plasma membrane, plastid 88.57 86.99
TraesCS5A01G316600.1 Wheat endoplasmic reticulum 79.67 82.21
TraesCS5D01G322900.1 Wheat endoplasmic reticulum 79.31 81.23
TraesCS5B01G317200.1 Wheat endoplasmic reticulum 79.31 81.23
Os09t0528700-00 Rice endoplasmic reticulum, plasma membrane, plastid 80.4 80.11
HORVU5Hr1G081060.2 Barley mitochondrion 77.86 76.33
OQU75572 Sorghum mitochondrion 36.84 76.32
OQU80753 Sorghum endoplasmic reticulum 74.23 75.05
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 56.26 65.13
HORVU5Hr1G057180.2 Barley cytosol 45.92 64.38
GSMUA_Achr2P03370_001 Banana endoplasmic reticulum, plasma membrane, plastid 52.09 62.94
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane, plastid 46.82 62.62
PGSC0003DMT400000685 Potato cytosol 49.73 62.56
PGSC0003DMT400014094 Potato cytosol 26.86 62.18
GSMUA_Achr1P07820_001 Banana endoplasmic reticulum, golgi, plastid 48.09 61.77
CDY71495 Canola mitochondrion 43.74 61.32
GSMUA_Achr11P... Banana plastid 57.71 60.69
VIT_02s0025g02570.t01 Wine grape endoplasmic reticulum, golgi 57.35 60.08
PGSC0003DMT400035609 Potato mitochondrion 47.73 60.05
CDX71698 Canola endoplasmic reticulum, golgi 57.35 59.4
CDX89135 Canola endoplasmic reticulum, vacuole 57.71 59.33
CDY57871 Canola endoplasmic reticulum, golgi 57.35 59.29
VIT_15s0048g02900.t01 Wine grape endoplasmic reticulum, plasma membrane 57.35 59.29
Bra007636.1-P Field mustard endoplasmic reticulum, golgi 57.17 59.21
CDY41546 Canola endoplasmic reticulum, plasma membrane 56.26 58.71
Bra004517.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 56.26 58.71
CDY61720 Canola endoplasmic reticulum, plasma membrane 56.08 58.63
CDY27309 Canola endoplasmic reticulum, golgi 56.08 58.63
Bra039267.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 56.08 58.63
CDX80036 Canola endoplasmic reticulum, plasma membrane, plastid 55.72 58.14
KRG97225 Soybean endoplasmic reticulum, golgi, plastid 54.81 57.74
AT3G61880.2 Thale cress endoplasmic reticulum 58.08 57.66
AT2G46660.1 Thale cress endoplasmic reticulum, plasma membrane 55.35 57.55
Solyc01g096280.1.1 Tomato endoplasmic reticulum, golgi 55.9 57.25
Bra033278.1-P Field mustard endoplasmic reticulum, golgi, plastid 54.99 56.64
CDX90016 Canola endoplasmic reticulum, golgi, plastid 54.99 56.11
Solyc10g009310.2.1 Tomato endoplasmic reticulum, plasma membrane 53.18 55.81
KRH06409 Soybean extracellular, plasma membrane 54.08 55.6
KRH47844 Soybean endoplasmic reticulum, golgi, plastid 54.63 55.54
CDY15193 Canola endoplasmic reticulum, golgi, plastid 54.27 55.47
Bra032624.1-P Field mustard endoplasmic reticulum 53.72 55.43
CDY32439 Canola endoplasmic reticulum 53.72 54.92
CDY37995 Canola endoplasmic reticulum 53.72 54.92
AT1G01190.2 Thale cress endoplasmic reticulum, golgi 53.54 54.63
Solyc05g047680.2.1 Tomato endoplasmic reticulum, golgi 51.91 53.86
EER92912 Sorghum endoplasmic reticulum 53.18 53.37
KXG39130 Sorghum endoplasmic reticulum 48.46 51.45
EER97498 Sorghum endoplasmic reticulum, plasma membrane 48.09 51.26
EER91649 Sorghum endoplasmic reticulum, plasma membrane 49.55 49.46
EES08485 Sorghum endoplasmic reticulum 41.38 42.3
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8062072UniProt:C5X655InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EER99230ProteinID:EER99230ProteinID:EER99230.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705
GO:GO:0016709GO:GO:0019748GO:GO:0020037GO:GO:0044550GO:GO:0046872GO:GO:0055114
InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298
PANTHER:PTHR24298:SF130EnsemblPlantsGene:SORBI_3002G272700SUPFAM:SSF48264unigene:Sbi.5091TMHMM:TMhelixUniParc:UPI0001A83D07
RefSeq:XP_002462709.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:-:65585643..65588410
Molecular Weight (calculated)
60518.3 Da
IEP (calculated)
8.415
GRAVY (calculated)
0.103
Length
551 amino acids
Sequence
(BLAST)
001: MAVAATPDDC GSWLLYLSLA AKCAGGDQPH RLAGFLAVCA VAFVVTCLLH WCFPGGPAWG RWWWTTQARR VAAAAVPGPR GLPVVGSMWL MTGLAHRKLA
101: AAADSLRARR LMAFSLGGTR VVVAAHPDVA REILNSPAFA DRPIKESAYG LLFHRAIGFA PYGAYWRALR RVASTHLFSP WQVAASAAQR AVIARQMVAA
201: MKQELSSSSS ASAGFEVRRV LRRGSLHNVM WSVFGRRYDL ELDPAKESPE TRELRSLVDE GYDLLGQLNW SDHLPWLARF DLQSTRSRCD RLVPLVNRFV
301: GGIIDAHRAR NDLRSAPPHA VMDFTDVLLS LPADDRLTDS DMIAVLWEMV FRGTDTVAVL IEWVLARLVL HPDVQARVHD ELDRVVGRDR AVTESDSGSL
401: VYLHAVIKEV LRMHPPGPLL SWARLATSDV QVDGHLIPAG TTAMVNMWAI THDPDVWAEP AEFQPERFMG STTGGEFPIM GSDLRLAPFG AGRRSCPGKS
501: LAMATVALWL ATLLHEFELL PARGVYLSEV LKLSCEMAVP LAVTARPRQA V
Best Arabidopsis Sequence Match ( AT3G61880.2 )
(BLAST)
001: MATKLDTSSL LLALLSKCSL LTQTNLALSL LVASLASLAL SLFFWSHPGG PAWGKYFLHR RRQTTVIPGP RGLPFVGSMS LMSNTLAHRC IAATAEKFRA
101: ERLMAFSLGE TRVIVTCNPD VAKEILNSPV FADRPVKESA YSLMFNRAIG FAPYGVYWRT LRKIASNHLF SPKQIKRSET QRSVIANQIV KCLTKQSNTK
201: GLCFARDLIK TASLNNMMCS VFGKEYELEE EHEEVSELRE LVEEGYDLLG TLNWTDHLPW LSEFDPQRIR SRCSNLVPKV NRFVNRIISD HREQTRDSPS
301: DFVDVLLSLD GPDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DIQSTVHNEL DQIVGRSRAV EESDVVSLVY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTII DGRRVPAGTT AMVNMWAIAH DPHVWENPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRVCPGKNLG LTTVTFWTAT LLHEFEWLTP
501: SDEKTVDLSE KLRLSCEMAN PLAAKLRPRR SFSQKNKIKN KESKGNKKKE SYKKY
Arabidopsis Description
CYP78A9Cytochrome p450 78a9 [Source:UniProtKB/TrEMBL;Acc:F4IX02]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.