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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G081060.2 Barley mitochondrion 81.17 56.76
TraesCS5A01G316600.1 Wheat endoplasmic reticulum 76.34 56.18
TraesCS5D01G322900.1 Wheat endoplasmic reticulum 75.57 55.2
TraesCS5B01G317200.1 Wheat endoplasmic reticulum 75.32 55.02
Os09t0528700-00 Rice endoplasmic reticulum, plasma membrane, plastid 64.63 45.93
EER99230 Sorghum endoplasmic reticulum 64.38 45.92
Zm00001d006193_P001 Maize endoplasmic reticulum, plasma membrane, plastid 61.58 43.14
HORVU7Hr1G057100.2 Barley endoplasmic reticulum, plasma membrane 57.51 41.17
VIT_02s0025g02570.t01 Wine grape endoplasmic reticulum, golgi 47.84 35.74
Bra039267.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 46.06 34.35
CDY27309 Canola endoplasmic reticulum, golgi 46.06 34.35
CDY61720 Canola endoplasmic reticulum, plasma membrane 46.06 34.35
CDX89135 Canola endoplasmic reticulum, vacuole 46.82 34.33
CDX80036 Canola endoplasmic reticulum, plasma membrane, plastid 46.06 34.28
Bra004517.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 46.06 34.28
CDY41546 Canola endoplasmic reticulum, plasma membrane 46.06 34.28
GSMUA_Achr2P03370_001 Banana endoplasmic reticulum, plasma membrane, plastid 39.69 34.21
CDX71698 Canola endoplasmic reticulum, golgi 46.06 34.02
Bra007636.1-P Field mustard endoplasmic reticulum, golgi 46.06 34.02
GSMUA_Achr11P... Banana plastid 45.29 33.97
CDY57871 Canola endoplasmic reticulum, golgi 46.06 33.96
VIT_15s0048g02900.t01 Wine grape endoplasmic reticulum, plasma membrane 45.55 33.58
AT2G46660.1 Thale cress endoplasmic reticulum, plasma membrane 44.78 33.21
AT3G61880.2 Thale cress endoplasmic reticulum 46.82 33.15
PGSC0003DMT400035609 Potato mitochondrion 36.9 33.1
Solyc01g096280.1.1 Tomato endoplasmic reticulum, golgi 45.04 32.9
KRG97225 Soybean endoplasmic reticulum, golgi, plastid 43.77 32.89
PGSC0003DMT400000685 Potato cytosol 36.64 32.88
KRH06409 Soybean extracellular, plasma membrane 44.78 32.84
KRH47844 Soybean endoplasmic reticulum, golgi, plastid 45.04 32.66
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 39.44 32.56
HORVU4Hr1G081210.1 Barley endoplasmic reticulum, plasma membrane 46.06 32.55
Solyc05g047680.2.1 Tomato endoplasmic reticulum, golgi 43.77 32.39
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane, plastid 33.33 31.8
Bra033278.1-P Field mustard endoplasmic reticulum, golgi, plastid 43.26 31.78
Bra032624.1-P Field mustard endoplasmic reticulum 43.0 31.65
CDX90016 Canola endoplasmic reticulum, golgi, plastid 43.26 31.48
CDY37995 Canola endoplasmic reticulum 43.0 31.35
CDY32439 Canola endoplasmic reticulum 43.0 31.35
Solyc10g009310.2.1 Tomato endoplasmic reticulum, plasma membrane 41.73 31.24
CDY15193 Canola endoplasmic reticulum, golgi, plastid 42.75 31.17
AT1G01190.2 Thale cress endoplasmic reticulum, golgi 42.75 31.11
GSMUA_Achr1P07820_001 Banana endoplasmic reticulum, golgi, plastid 33.59 30.77
CDY71495 Canola mitochondrion 30.28 30.28
HORVU2Hr1G032890.2 Barley endoplasmic reticulum, plasma membrane 36.39 26.24
PGSC0003DMT400014094 Potato cytosol 6.11 10.08
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A287RCF4ncoils:CoilInterPro:Cyt_P450InterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016705GO:GO:0020037GO:GO:0055114
EnsemblPlantsGene:HORVU5Hr1G057180EnsemblPlants:HORVU5Hr1G057180.2InterPro:IPR036396PFAM:PF00067PANTHER:PTHR24298PANTHER:PTHR24298:SF130
SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI000B46E916SEG:seg::
Description
No Description!
Coordinates
chrchr5H:-:448274066..448275430
Molecular Weight (calculated)
38559.7 Da
IEP (calculated)
10.818
GRAVY (calculated)
-0.020
Length
393 amino acids
Sequence
(BLAST)
001: GTPQRRSYEC VDWQNGGVDG XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXRLAGLLS VCAAAFAVTC ILHWCFPGGA AWGRWWLTRR LKGSLLPGPR
101: GLPLIGSMWL MTGLAHRKLA AEAARLGGRA KRLMAFSLGE TRMVVAAHPD VAREILNSPA FADRPIKESA YGLLFHRAIG FAPHGAYWRA LRRVASTHLF
201: SPWQITASAP QRAVIASQMV TALVGAGAGV EVRRVLRRAS LHNVMWSVFG RRYDLDSNKE SEEVRELSHL VDEGYDLLGQ LNWSDHLPWL ARFDLQGTRA
301: RCSGLVPRVN RFVRRIIDDH RSAAASAGVK DFTDVLLSLQ GGDKLADADM IAVLWVCATE PKPTPXXXXX XXXGLRLVHG SHLGRTAIAR LGG
Best Arabidopsis Sequence Match ( AT1G01190.1 )
(BLAST)
001: MRTEIESLWV FALASKFNIY MQQHFASLLV AIAITWFTIT IVFWSTPGGP AWGKYFFTRR FISLDYNRKY KNLIPGPRGF PLVGSMSLRS SHVAHQRIAS
101: VAEMSNAKRL MAFSLGDTKV VVTCHPAVAK EILNSSVFAD RPVDETAYGL MFNRAMGFAP NGTYWRTLRR LGSNHLFNPK QIKQSEDQRR VIATQMVNAF
201: ARNPKSACAV RDLLKTASLC NMMGLVFGRE YELESNNNLE SECLKGLVEE GYDLLGTLNW TDHLPWLAGL DFQQIRFRCS QLVPKVNLLL SRIIHEQRAA
301: TGNFLDMLLS LQGSEKLSES DMVAVLWEMI FRGTDTVAVL VEWVLARIVM HPKVQLTVHD ELDRVVGRSR TVDESDLPSL TYLTAMIKEV LRLHPPGPLL
401: SWARLSITDT SVDGYHVPAG TTAMVNMWAI ARDPHVWEDP LEFKPERFVA KEGEAEFSVF GSDLRLAPFG SGKRVCPGKN LGLTTVSFWV ATLLHEFEWL
501: PSVEANPPDL SEVLRLSCEM ACPLIVNVSS RRKIM
Arabidopsis Description
CYP78A8CYP78A8 [Source:UniProtKB/TrEMBL;Acc:A0A178WIC4]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.