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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 1
  • endoplasmic reticulum 4
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, secretory
BaCelLo:cytosol
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032624.1-P Field mustard endoplasmic reticulum 99.07 100.0
CDY37995 Canola endoplasmic reticulum 98.33 98.33
CDX90016 Canola endoplasmic reticulum, golgi, plastid 88.87 88.7
CDY15193 Canola endoplasmic reticulum, golgi, plastid 87.94 87.94
AT1G01190.2 Thale cress endoplasmic reticulum, golgi 87.76 87.59
CDY71495 Canola mitochondrion 51.02 69.97
CDY41546 Canola endoplasmic reticulum, plasma membrane 67.53 68.94
CDX80036 Canola endoplasmic reticulum, plasma membrane, plastid 67.16 68.56
CDY61720 Canola endoplasmic reticulum, plasma membrane 66.98 68.5
CDY27309 Canola endoplasmic reticulum, golgi 66.79 68.31
PGSC0003DMT400014094 Potato cytosol 30.06 68.07
PGSC0003DMT400000685 Potato cytosol 54.92 67.58
CDX89135 Canola endoplasmic reticulum, vacuole 66.6 66.98
CDY57871 Canola endoplasmic reticulum, golgi 65.31 66.04
CDX71698 Canola endoplasmic reticulum, golgi 64.94 65.79
VIT_02s0025g02570.t01 Wine grape endoplasmic reticulum, golgi 63.27 64.83
VIT_15s0048g02900.t01 Wine grape endoplasmic reticulum, plasma membrane 63.08 63.79
OQU75572 Sorghum mitochondrion 31.35 63.53
KRG97225 Soybean endoplasmic reticulum, golgi, plastid 61.22 63.1
PGSC0003DMT400035609 Potato mitochondrion 51.21 63.01
Solyc01g096280.1.1 Tomato endoplasmic reticulum, golgi 62.89 63.01
KRH06409 Soybean extracellular, plasma membrane 61.22 61.57
KRH47844 Soybean endoplasmic reticulum, golgi, plastid 61.22 60.89
Solyc10g009310.2.1 Tomato endoplasmic reticulum, plasma membrane 58.63 60.19
Solyc05g047680.2.1 Tomato endoplasmic reticulum, golgi 57.33 58.19
TraesCS5A01G316600.1 Wheat endoplasmic reticulum 55.84 56.37
TraesCS5D01G322900.1 Wheat endoplasmic reticulum 56.22 56.32
TraesCS7B01G168800.1 Wheat plastid 57.14 55.8
TraesCS5B01G317200.1 Wheat endoplasmic reticulum 55.66 55.76
HORVU7Hr1G057100.2 Barley endoplasmic reticulum, plasma membrane 56.59 55.56
Zm00001d032042_P001 Maize endoplasmic reticulum 57.33 55.48
TraesCS7D01G271100.1 Wheat endoplasmic reticulum, plasma membrane 56.77 55.43
Zm00001d053202_P001 Maize endoplasmic reticulum 55.84 55.43
Os09t0528700-00 Rice endoplasmic reticulum, plasma membrane, plastid 56.77 55.33
GSMUA_Achr2P03370_001 Banana endoplasmic reticulum, plasma membrane, plastid 46.75 55.26
OQU80753 Sorghum endoplasmic reticulum 55.84 55.23
TraesCS7A01G270700.1 Wheat endoplasmic reticulum, plasma membrane 56.03 55.01
GSMUA_Achr1P07820_001 Banana endoplasmic reticulum, golgi, plastid 43.6 54.78
HORVU5Hr1G081060.2 Barley mitochondrion 56.96 54.63
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane, plastid 41.74 54.61
Os08t0547300-01 Rice endoplasmic reticulum, plasma membrane, plastid 55.66 54.45
EER99230 Sorghum endoplasmic reticulum 54.92 53.72
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 47.31 53.57
GSMUA_Achr11P... Banana plastid 51.21 52.67
Zm00001d006193_P001 Maize endoplasmic reticulum, plasma membrane, plastid 53.8 51.69
CDY42442 Canola cytosol 30.61 51.08
Os03t0134500-00 Rice endoplasmic reticulum 51.21 50.46
EER92912 Sorghum endoplasmic reticulum 50.83 49.91
HORVU4Hr1G081210.1 Barley endoplasmic reticulum, plasma membrane 51.39 49.82
TraesCS5A01G502000.1 Wheat endoplasmic reticulum 51.21 49.82
TraesCS4D01G327400.1 Wheat endoplasmic reticulum 51.02 49.82
Zm00001d027537_P001 Maize endoplasmic reticulum 50.46 49.82
CDY68665 Canola plastid 43.97 49.17
CDY16102 Canola plastid 43.41 48.35
CDX96516 Canola endoplasmic reticulum, plasma membrane 46.75 47.55
CDX73053 Canola extracellular, plasma membrane 46.57 47.36
CDX98123 Canola endoplasmic reticulum, plasma membrane 45.27 47.29
CDY49134 Canola endoplasmic reticulum, golgi, plasma membrane 46.38 46.99
CDY21618 Canola endoplasmic reticulum 46.57 46.92
CDX69873 Canola endoplasmic reticulum 46.38 46.82
CDY36404 Canola endoplasmic reticulum, plasma membrane 44.71 46.71
TraesCS4B01G330500.1 Wheat mitochondrion 51.02 45.83
CDY42443 Canola endoplasmic reticulum, plasma membrane 38.59 45.02
HORVU5Hr1G057180.2 Barley cytosol 31.35 43.0
CDY42441 Canola endoplasmic reticulum, plasma membrane 12.43 39.88
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13GO:A0A078H4X3UniProt:A0A078H4X3EnsemblPlants:CDY32439ProteinID:CDY32439
ProteinID:CDY32439.1InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705GO:GO:0020037
GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00052404001InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF46SUPFAM:SSF48264TMHMM:TMhelix
UniParc:UPI0004EEDFEDSEG:seg::::
Description
BnaA09g51570DBnaA09g51570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4X3]
Coordinates
chrLK032295:+:4590..6483
Molecular Weight (calculated)
61093.1 Da
IEP (calculated)
8.646
GRAVY (calculated)
-0.034
Length
539 amino acids
Sequence
(BLAST)
001: MFSLKMGTEV ENLWVFALAS KFNLFMQDHF VYFLVAIAIT WFTLSIVFWS VPGGPAWGRY FFTRRFTPYF NRKNKNVIPG PRGFPLVGSM SLRSSHVAHQ
101: RIADVAAMNN AKRLMAFSLG DTKVIVTCHP EVAKEILNSS VFADRPVDET AYGLMFNRAM GFAPNGTYWR MLRRLGSNHL FNPKQIKRSE EQRRVIATRM
201: VNAFTSNAGN VFGVRDLLKT ASLCNMMGLV FGKEYELETN NNVESEYLKS LVEEGYDLLG TLNWTDHLPW LAGLDFQQIR FRCSQLVPKV NQLLSRIIHE
301: HRTAACNFLD VLHSLQGSEK LSESDMVAVL WEMIFRGTDT VAVLMEWVLA RIVMHPKIQS TVHEELDRVV GRSRAVDESD LPSLTYLTAM IKEVLRLHPP
401: GPLLSWARLS IADTTVDGYH VPAGTTAMVN MWAIARDPHV WENPLEFKPE RFVAKEGEAE FSVFGSDLRL APFGSGKRVC PGKNLGLTTV TFWVAKLLHE
501: FEWLPSVNAN PPDLSEVLRL SCEMACPLVV DVRPRRKTT
Best Arabidopsis Sequence Match ( AT1G01190.2 )
(BLAST)
001: MFSLNMRTEI ESLWVFALAS KFNIYMQQHF ASLLVAIAIT WFTITIVFWS TPGGPAWGKY FFTRRFISLD YNRKYKNLIP GPRGFPLVGS MSLRSSHVAH
101: QRIASVAEMS NAKRLMAFSL GDTKVVVTCH PAVAKEILNS SVFADRPVDE TAYGLMFNRA MGFAPNGTYW RTLRRLGSNH LFNPKQIKQS EDQRRVIATQ
201: MVNAFARNPK SACAVRDLLK TASLCNMMGL VFGREYELES NNNLESECLK GLVEEGYDLL GTLNWTDHLP WLAGLDFQQI RFRCSQLVPK VNLLLSRIIH
301: EQRAATGNFL DMLLSLQGSE KLSESDMVAV LWEMIFRGTD TVAVLVEWVL ARIVMHPKVQ LTVHDELDRV VGRSRTVDES DLPSLTYLTA MIKEVLRLHP
401: PGPLLSWARL SITDTSVDGY HVPAGTTAMV NMWAIARDPH VWEDPLEFKP ERFVAKEGEA EFSVFGSDLR LAPFGSGKRV CPGKNLGLTT VSFWVATLLH
501: EFEWLPSVEA NPPDLSEVLR LSCEMACPLI VNVSSRRKIM
Arabidopsis Description
CYP78A8CYP78A8 [Source:UniProtKB/TrEMBL;Acc:A0A178WIC4]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.