Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 2
  • endoplasmic reticulum 5
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027537_P001 Maize endoplasmic reticulum 92.35 92.86
Os03t0134500-00 Rice endoplasmic reticulum 85.97 86.29
TraesCS4D01G327400.1 Wheat endoplasmic reticulum 83.24 82.79
TraesCS5A01G502000.1 Wheat endoplasmic reticulum 82.88 82.13
HORVU4Hr1G081210.1 Barley endoplasmic reticulum, plasma membrane 82.88 81.83
TraesCS4B01G330500.1 Wheat mitochondrion 82.88 75.83
OQU75572 Sorghum mitochondrion 31.69 65.41
PGSC0003DMT400014094 Potato cytosol 26.05 60.08
GSMUA_Achr1P07820_001 Banana endoplasmic reticulum, golgi, plastid 44.63 57.11
GSMUA_Achr2P03370_001 Banana endoplasmic reticulum, plasma membrane, plastid 46.99 56.58
PGSC0003DMT400000685 Potato cytosol 44.99 56.39
OQU80753 Sorghum endoplasmic reticulum 55.92 56.33
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 48.63 56.09
CDY71495 Canola mitochondrion 39.34 54.96
CDY27309 Canola endoplasmic reticulum, golgi 52.64 54.84
CDY61720 Canola endoplasmic reticulum, plasma membrane 52.64 54.84
VIT_02s0025g02570.t01 Wine grape endoplasmic reticulum, golgi 52.46 54.75
Bra004517.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 52.64 54.73
Bra039267.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 52.46 54.65
CDX80036 Canola endoplasmic reticulum, plasma membrane, plastid 52.46 54.55
CDY41546 Canola endoplasmic reticulum, plasma membrane 52.28 54.36
AT2G46660.1 Thale cress endoplasmic reticulum, plasma membrane 52.09 53.96
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane, plastid 40.26 53.64
PGSC0003DMT400035609 Potato mitochondrion 42.44 53.2
EER99230 Sorghum endoplasmic reticulum 53.37 53.18
CDX89135 Canola endoplasmic reticulum, vacuole 51.73 52.99
VIT_15s0048g02900.t01 Wine grape endoplasmic reticulum, plasma membrane 51.18 52.72
GSMUA_Achr11P... Banana plastid 50.09 52.48
CDY57871 Canola endoplasmic reticulum, golgi 50.64 52.16
Bra007636.1-P Field mustard endoplasmic reticulum, golgi 50.46 52.07
CDX71698 Canola endoplasmic reticulum, golgi 50.46 52.07
KRG97225 Soybean endoplasmic reticulum, golgi, plastid 49.54 52.01
Solyc01g096280.1.1 Tomato endoplasmic reticulum, golgi 50.64 51.67
Bra032624.1-P Field mustard endoplasmic reticulum 49.91 51.31
Solyc10g009310.2.1 Tomato endoplasmic reticulum, plasma membrane 49.0 51.24
CDY37995 Canola endoplasmic reticulum 50.27 51.21
KRH06409 Soybean extracellular, plasma membrane 49.91 51.12
CDY32439 Canola endoplasmic reticulum 49.91 50.83
AT1G01190.2 Thale cress endoplasmic reticulum, golgi 49.91 50.74
Bra033278.1-P Field mustard endoplasmic reticulum, golgi, plastid 49.36 50.65
AT3G61880.2 Thale cress endoplasmic reticulum 51.18 50.63
EER97498 Sorghum endoplasmic reticulum, plasma membrane 47.18 50.1
CDX90016 Canola endoplasmic reticulum, golgi, plastid 49.18 50.0
KRH47844 Soybean endoplasmic reticulum, golgi, plastid 49.18 49.82
CDY15193 Canola endoplasmic reticulum, golgi, plastid 48.63 49.54
KXG39130 Sorghum endoplasmic reticulum 46.08 48.75
Solyc05g047680.2.1 Tomato endoplasmic reticulum, golgi 46.81 48.4
EER91649 Sorghum endoplasmic reticulum, plasma membrane 46.45 46.2
EES08485 Sorghum endoplasmic reticulum 42.08 42.86
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8057410UniProt:C5WZ14InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EER92912ProteinID:EER92912ProteinID:EER92912.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705
GO:GO:0016709GO:GO:0019748GO:GO:0020037GO:GO:0044550GO:GO:0046872GO:GO:0055114
InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298
PANTHER:PTHR24298:SF46EnsemblPlantsGene:SORBI_3001G514700SUPFAM:SSF48264unigene:Sbi.2274TMHMM:TMhelixUniParc:UPI0001A82C94
RefSeq:XP_002465914.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:+:78182391..78184789
Molecular Weight (calculated)
59813.2 Da
IEP (calculated)
6.514
GRAVY (calculated)
0.012
Length
549 amino acids
Sequence
(BLAST)
001: MESSVESWWV LPMTLIPAIS GQQHENMATI ATSFVYLAIF ACLAWAGASL LYWAHPGGPA WGKYWRAKGK PSSTIPGPKG LPVVGSLGLM SGLAHCSLAD
101: EASRRPGAKR LMALSLGPVR AVVTSHPDVA KEILDNPAFA DRPLNHAAYG LMFHRSIGFA EHGPYWRALR RVAAGHLFGP RQVEAFAPYR AAVGEGIVAA
201: LHGAGGGVVQ VRGLLRRASL YYIMRFVFGK EYDVSRAVPA SGKEEVEELL EMVHEGYELL GMENWCDYFP GLAALDPQGV GARCAELMPR VNRFVHGIIQ
301: ERRAKAIAGG DARDFVDILL SLQESERLAD ADIAAVLWEM IFRGTDAMAV LMEWTLARLV LHRDVQAKAH RELDEVVGGN SQVVTESAAA PSLPYLQALL
401: KEALRMHPPG PLLSWRHRAI SDTYVDGHLV PAGTTAMVNQ WAISRDPEVW DAPLEFRPER FLPGGEGQDV SVLGADGRLV PFGSGRRSCP GKSLAMTTVT
501: TWMATLLNEF EWLPASDDTG GDVDLSEVLR LSCEMAVPLE VRVRPRSGM
Best Arabidopsis Sequence Match ( AT3G61880.2 )
(BLAST)
001: MATKLDTSSL LLALLSKCSL LTQTNLALSL LVASLASLAL SLFFWSHPGG PAWGKYFLHR RRQTTVIPGP RGLPFVGSMS LMSNTLAHRC IAATAEKFRA
101: ERLMAFSLGE TRVIVTCNPD VAKEILNSPV FADRPVKESA YSLMFNRAIG FAPYGVYWRT LRKIASNHLF SPKQIKRSET QRSVIANQIV KCLTKQSNTK
201: GLCFARDLIK TASLNNMMCS VFGKEYELEE EHEEVSELRE LVEEGYDLLG TLNWTDHLPW LSEFDPQRIR SRCSNLVPKV NRFVNRIISD HREQTRDSPS
301: DFVDVLLSLD GPDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DIQSTVHNEL DQIVGRSRAV EESDVVSLVY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTII DGRRVPAGTT AMVNMWAIAH DPHVWENPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRVCPGKNLG LTTVTFWTAT LLHEFEWLTP
501: SDEKTVDLSE KLRLSCEMAN PLAAKLRPRR SFSQKNKIKN KESKGNKKKE SYKKY
Arabidopsis Description
CYP78A9Cytochrome p450 78a9 [Source:UniProtKB/TrEMBL;Acc:F4IX02]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.