Factsheet for TraesCS4D01G327400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
endoplasmic reticulum 4
extracellular 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G502000.1	Wheat	endoplasmic reticulum	96.56	96.21
HORVU4Hr1G081210.1	Barley	endoplasmic reticulum, plasma membrane	96.01	95.32
TraesCS4B01G330500.1	Wheat	mitochondrion	97.64	89.83
Os03t0134500-00	Rice	endoplasmic reticulum	83.88	84.64
EER92912	Sorghum	endoplasmic reticulum	82.79	83.24
Zm00001d027537_P001	Maize	endoplasmic reticulum	82.07	82.97
PGSC0003DMT400014094	Potato	cytosol	25.91	60.08
TraesCS5D01G322900.1	Wheat	endoplasmic reticulum	57.07	58.55
GSMUA_Achr2P03370_001	Banana	endoplasmic reticulum, plasma membrane, plastid	47.83	57.89
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	49.46	57.35
GSMUA_Achr1P07820_001	Banana	endoplasmic reticulum, golgi, plastid	44.2	56.88
CDY71495	Canola	mitochondrion	40.04	56.23
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane, plastid	41.67	55.83
PGSC0003DMT400000685	Potato	cytosol	44.2	55.71
VIT_02s0025g02570.t01	Wine grape	endoplasmic reticulum, golgi	53.08	55.7
CDY27309	Canola	endoplasmic reticulum, golgi	52.72	55.22
Bra004517.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	52.72	55.11
Bra039267.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	52.54	55.03
CDX80036	Canola	endoplasmic reticulum, plasma membrane, plastid	52.54	54.92
CDY61720	Canola	endoplasmic reticulum, plasma membrane	52.36	54.84
CDY41546	Canola	endoplasmic reticulum, plasma membrane	52.36	54.73
TraesCS7D01G271100.1	Wheat	endoplasmic reticulum, plasma membrane	54.53	54.53
AT2G46660.1	Thale cress	endoplasmic reticulum, plasma membrane	52.36	54.53
CDX89135	Canola	endoplasmic reticulum, vacuole	52.54	54.1
PGSC0003DMT400035609	Potato	mitochondrion	42.75	53.88
CDY57871	Canola	endoplasmic reticulum, golgi	51.27	53.1
VIT_15s0048g02900.t01	Wine grape	endoplasmic reticulum, plasma membrane	51.27	53.1
Bra007636.1-P	Field mustard	endoplasmic reticulum, golgi	51.09	53.01
CDX71698	Canola	endoplasmic reticulum, golgi	51.09	53.01
KRG97225	Soybean	endoplasmic reticulum, golgi, plastid	50.18	52.96
GSMUA_Achr11P...	Banana	plastid	50.0	52.67
Solyc01g096280.1.1	Tomato	endoplasmic reticulum, golgi	50.36	51.67
Bra033278.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	50.0	51.59
AT3G61880.2	Thale cress	endoplasmic reticulum	51.81	51.53
Bra032624.1-P	Field mustard	endoplasmic reticulum	49.82	51.5
CDY37995	Canola	endoplasmic reticulum	50.18	51.39
CDY32439	Canola	endoplasmic reticulum	49.82	51.02
CDX90016	Canola	endoplasmic reticulum, golgi, plastid	49.82	50.93
Solyc10g009310.2.1	Tomato	endoplasmic reticulum, plasma membrane	48.19	50.67
KRH06409	Soybean	extracellular, plasma membrane	49.09	50.56
AT1G01190.2	Thale cress	endoplasmic reticulum, golgi	49.46	50.56
CDY15193	Canola	endoplasmic reticulum, golgi, plastid	49.28	50.46
KRH47844	Soybean	endoplasmic reticulum, golgi, plastid	49.28	50.18
Solyc05g047680.2.1	Tomato	endoplasmic reticulum, golgi	46.92	48.78
TraesCS2D01G183000.1	Wheat	endoplasmic reticulum, plasma membrane	43.66	46.89

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF46	SUPFAM:SSF48264
SignalP:SignalP-TM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G327400	EnsemblPlants:TraesCS4D01G327400.1	SEG:seg	:

Description

No Description!

Coordinates

chr4D:-:486773412..486775386

Molecular Weight (calculated)

59738.2 Da

IEP (calculated)

8.246

GRAVY (calculated)

0.052

Length

552 amino acids

Sequence
(BLAST)

001: MESSVQSWWV LPLTLLPAIS GGQHDGTTTT LAAVATSFAY LAVLACLAWA AAALLYWAHP GGPAWGRYWR GRGQGAGLRR AIPGPKGLPV VGSLGLMSGL
101: AHRSLAAEAA RRPGAKRLMA LSLGPVRAVV ASHPDVAKEI LDNPAFAARP LNHAAYGLMF HRSIGFAEHG PYWRALRRVA SGHLFGPRQV DAFTPYRARV
201: AGDVVAALRG AGAGVVELRG VLRRASLYYI MRFVFGKEYD VSAPQSSSGE VEELLEMVHE GYELLGKENW CDYFPGLAAV DPQGIGARCA ELMPRVNRFV
301: HGIIREHRAK ATTAAAGGEV PRDFVDILLS LQDSEGLADA DIAAVLWEMI FRGTDAMAVL MEWAMARLVL HRDVQAKVHR ELDEVVGRSS PVAEPSLPAL
401: PYLQALIKEA LRVHPPGPLL SWRHRAITDT YVDGHLVPAG TTAMVNQWAM SRDPEVWDAP LEFRPERFLA GGEAPDVSVL GADGRLVPFG SGRRSCPGKS
501: LAMTTVTAWM ATLLHEFEWA PAAPGVDLSE VLRLSCEMAA PLQVRVRPRR DA

Best Arabidopsis Sequence Match ( AT1G01190.1 )
(BLAST)

001: MRTEIESLWV FALASKFNIY MQQHFASLLV AIAITWFTIT IVFWSTPGGP AWGKYFFTRR FISLDYNRKY KNLIPGPRGF PLVGSMSLRS SHVAHQRIAS
101: VAEMSNAKRL MAFSLGDTKV VVTCHPAVAK EILNSSVFAD RPVDETAYGL MFNRAMGFAP NGTYWRTLRR LGSNHLFNPK QIKQSEDQRR VIATQMVNAF
201: ARNPKSACAV RDLLKTASLC NMMGLVFGRE YELESNNNLE SECLKGLVEE GYDLLGTLNW TDHLPWLAGL DFQQIRFRCS QLVPKVNLLL SRIIHEQRAA
301: TGNFLDMLLS LQGSEKLSES DMVAVLWEMI FRGTDTVAVL VEWVLARIVM HPKVQLTVHD ELDRVVGRSR TVDESDLPSL TYLTAMIKEV LRLHPPGPLL
401: SWARLSITDT SVDGYHVPAG TTAMVNMWAI ARDPHVWEDP LEFKPERFVA KEGEAEFSVF GSDLRLAPFG SGKRVCPGKN LGLTTVSFWV ATLLHEFEWL
501: PSVEANPPDL SEVLRLSCEM ACPLIVNVSS RRKIM

Arabidopsis Description

CYP78A8CYP78A8 [Source:UniProtKB/TrEMBL;Acc:A0A178WIC4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.