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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:
  • nucleus 2
  • endoplasmic reticulum 3
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plastid
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90016 Canola endoplasmic reticulum, golgi, plastid 99.81 98.89
CDY15193 Canola endoplasmic reticulum, golgi, plastid 98.13 97.4
Bra032624.1-P Field mustard endoplasmic reticulum 88.97 89.14
AT1G01190.2 Thale cress endoplasmic reticulum, golgi 89.16 88.33
Bra004517.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 67.66 68.56
Bra039267.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 66.73 67.74
PGSC0003DMT400000685 Potato cytosol 54.95 67.12
PGSC0003DMT400014094 Potato cytosol 29.72 66.81
Bra007636.1-P Field mustard endoplasmic reticulum, golgi 65.61 65.98
OQU75572 Sorghum mitochondrion 32.15 64.66
VIT_02s0025g02570.t01 Wine grape endoplasmic reticulum, golgi 63.18 64.26
KRG97225 Soybean endoplasmic reticulum, golgi, plastid 62.8 64.24
VIT_15s0048g02900.t01 Wine grape endoplasmic reticulum, plasma membrane 63.18 63.41
Solyc01g096280.1.1 Tomato endoplasmic reticulum, golgi 63.74 63.38
KRH06409 Soybean extracellular, plasma membrane 62.62 62.5
PGSC0003DMT400035609 Potato mitochondrion 51.03 62.33
KRH47844 Soybean endoplasmic reticulum, golgi, plastid 61.68 60.89
Solyc10g009310.2.1 Tomato endoplasmic reticulum, plasma membrane 58.5 59.62
Solyc05g047680.2.1 Tomato endoplasmic reticulum, golgi 57.38 57.82
TraesCS5A01G316600.1 Wheat endoplasmic reticulum 56.64 56.74
GSMUA_Achr2P03370_001 Banana endoplasmic reticulum, plasma membrane, plastid 48.22 56.58
TraesCS5D01G322900.1 Wheat endoplasmic reticulum 56.82 56.51
TraesCS5B01G317200.1 Wheat endoplasmic reticulum 56.45 56.13
OQU80753 Sorghum endoplasmic reticulum 57.01 55.96
Os09t0528700-00 Rice endoplasmic reticulum, plasma membrane, plastid 57.76 55.88
Zm00001d053202_P001 Maize endoplasmic reticulum 56.64 55.8
TraesCS7D01G271100.1 Wheat endoplasmic reticulum, plasma membrane 57.57 55.8
TraesCS7B01G168800.1 Wheat plastid 57.57 55.8
HORVU7Hr1G057100.2 Barley endoplasmic reticulum, plasma membrane 57.2 55.74
GSMUA_Achr1P07820_001 Banana endoplasmic reticulum, golgi, plastid 44.67 55.71
TraesCS7A01G270700.1 Wheat endoplasmic reticulum, plasma membrane 56.82 55.37
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane, plastid 42.62 55.34
Zm00001d032042_P001 Maize endoplasmic reticulum 57.57 55.3
EER99230 Sorghum endoplasmic reticulum 56.64 54.99
HORVU5Hr1G081060.2 Barley mitochondrion 57.57 54.8
Os08t0547300-01 Rice endoplasmic reticulum, plasma membrane, plastid 56.07 54.45
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 48.41 54.41
Zm00001d006193_P001 Maize endoplasmic reticulum, plasma membrane, plastid 55.7 53.12
GSMUA_Achr11P... Banana plastid 51.78 52.86
Os03t0134500-00 Rice endoplasmic reticulum 51.59 50.46
TraesCS4D01G327400.1 Wheat endoplasmic reticulum 51.59 50.0
HORVU4Hr1G081210.1 Barley endoplasmic reticulum, plasma membrane 51.59 49.64
TraesCS5A01G502000.1 Wheat endoplasmic reticulum 51.4 49.64
EER92912 Sorghum endoplasmic reticulum 50.65 49.36
Zm00001d027537_P001 Maize endoplasmic reticulum 50.09 49.08
Bra015934.1-P Field mustard endoplasmic reticulum, plasma membrane 47.1 47.55
Bra009070.1-P Field mustard endoplasmic reticulum 46.92 47.0
Bra026892.1-P Field mustard endoplasmic reticulum 45.05 46.8
Bra040720.1-P Field mustard endoplasmic reticulum, plasma membrane 44.86 46.51
Bra008134.1-P Field mustard endoplasmic reticulum, golgi 46.17 46.43
TraesCS4B01G330500.1 Wheat mitochondrion 51.03 45.5
HORVU5Hr1G057180.2 Barley cytosol 31.78 43.26
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EnsemblPlantsGene:Bra033278EnsemblPlants:Bra033278.1EnsemblPlants:Bra033278.1-PInterPro:Cyt_P450
InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497
GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114
InterPro:IPR036396UniProt:M4EWU3PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086
PANTHER:PTHR24298PANTHER:PTHR24298:SF46SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI000254514A:
Description
AT1G01190 (E=3e-281) CYP78A8 | CYP78A8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding
Coordinates
chrA10:-:4529857..4531538
Molecular Weight (calculated)
60183.0 Da
IEP (calculated)
8.637
GRAVY (calculated)
-0.011
Length
535 amino acids
Sequence
(BLAST)
001: MRTEIENLWV FALASKCNIF IQEHFISLLI AVAITWFTLT IVFWSTPGGP AWGRYFFTRR FTSGCNQKNK NIIPGPRGFP LVGSMSLRSS RVAHQRIAAV
101: AAMRNAKRLM AFSLGDTKVV VTCHPDVAKE ILNSSVFADR PVDETAYGLM FNRAMGFAPN GAYWRTLRRL GSNHLFNPKQ IKRSEEQRRV IATQMVNVFA
201: RNAETAFGVR DLLKTASLSN MMGLVFGKQY ELESNNNVES ECLKGLVEEG YDLLGTLNWT DHLPWLAGLD FQQVRFRCSQ LVPKVNQLLS RIIHEHRALT
301: CSFLDVLQHS LHDSEKLSES DMVAVLWEMI FRGTDTVAVL IEWVLARIVM HPKVQSTVHD ELDRVVGRSK AVDESDLPSL TYLTAMIKEV LRLHPPGPLL
401: SWARLSITDT TVDGYHVPAG TTAMVNMWAI ARDPHVWENP LEFKPERFVA KEGEAEFSVL GSDLRLAPFG SGKRVCPGKN LGLATVSFWV ATLLHEFEWL
501: SSVNANPPDL SEVLRLSCEM ACPLVVNVRS RRKIA
Best Arabidopsis Sequence Match ( AT1G01190.1 )
(BLAST)
001: MRTEIESLWV FALASKFNIY MQQHFASLLV AIAITWFTIT IVFWSTPGGP AWGKYFFTRR FISLDYNRKY KNLIPGPRGF PLVGSMSLRS SHVAHQRIAS
101: VAEMSNAKRL MAFSLGDTKV VVTCHPAVAK EILNSSVFAD RPVDETAYGL MFNRAMGFAP NGTYWRTLRR LGSNHLFNPK QIKQSEDQRR VIATQMVNAF
201: ARNPKSACAV RDLLKTASLC NMMGLVFGRE YELESNNNLE SECLKGLVEE GYDLLGTLNW TDHLPWLAGL DFQQIRFRCS QLVPKVNLLL SRIIHEQRAA
301: TGNFLDMLLS LQGSEKLSES DMVAVLWEMI FRGTDTVAVL VEWVLARIVM HPKVQLTVHD ELDRVVGRSR TVDESDLPSL TYLTAMIKEV LRLHPPGPLL
401: SWARLSITDT SVDGYHVPAG TTAMVNMWAI ARDPHVWEDP LEFKPERFVA KEGEAEFSVF GSDLRLAPFG SGKRVCPGKN LGLTTVSFWV ATLLHEFEWL
501: PSVEANPPDL SEVLRLSCEM ACPLIVNVSS RRKIM
Arabidopsis Description
CYP78A8CYP78A8 [Source:UniProtKB/TrEMBL;Acc:A0A178WIC4]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.