Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 4
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G327400.1 | Wheat | endoplasmic reticulum | 96.21 | 96.56 |
| HORVU4Hr1G081210.1 | Barley | endoplasmic reticulum, plasma membrane | 94.04 | 93.7 |
| TraesCS4B01G330500.1 | Wheat | mitochondrion | 95.85 | 88.5 |
| Os03t0134500-00 | Rice | endoplasmic reticulum | 83.21 | 84.28 |
| Zm00001d027537_P001 | Maize | endoplasmic reticulum | 81.77 | 82.97 |
| EER92912 | Sorghum | endoplasmic reticulum | 82.13 | 82.88 |
| PGSC0003DMT400014094 | Potato | cytosol | 25.99 | 60.5 |
| TraesCS5A01G316600.1 | Wheat | endoplasmic reticulum | 56.68 | 58.8 |
| GSMUA_Achr2P03370_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 47.47 | 57.68 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 49.1 | 57.14 |
| GSMUA_Achr1P07820_001 | Banana | endoplasmic reticulum, golgi, plastid | 43.86 | 56.64 |
| CDY71495 | Canola | mitochondrion | 39.89 | 56.23 |
| PGSC0003DMT400000685 | Potato | cytosol | 44.4 | 56.16 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane, plastid | 41.52 | 55.83 |
| VIT_02s0025g02570.t01 | Wine grape | endoplasmic reticulum, golgi | 52.89 | 55.7 |
| CDY27309 | Canola | endoplasmic reticulum, golgi | 52.71 | 55.41 |
| Bra039267.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid | 52.53 | 55.22 |
| Bra004517.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid | 52.53 | 55.11 |
| CDY61720 | Canola | endoplasmic reticulum, plasma membrane | 52.35 | 55.03 |
| CDX80036 | Canola | endoplasmic reticulum, plasma membrane, plastid | 52.35 | 54.92 |
| AT2G46660.1 | Thale cress | endoplasmic reticulum, plasma membrane | 52.53 | 54.91 |
| CDY41546 | Canola | endoplasmic reticulum, plasma membrane | 52.17 | 54.73 |
| TraesCS7A01G270700.1 | Wheat | endoplasmic reticulum, plasma membrane | 53.97 | 54.46 |
| CDX89135 | Canola | endoplasmic reticulum, vacuole | 52.17 | 53.92 |
| PGSC0003DMT400035609 | Potato | mitochondrion | 42.42 | 53.65 |
| VIT_15s0048g02900.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 51.08 | 53.1 |
| CDY57871 | Canola | endoplasmic reticulum, golgi | 50.9 | 52.91 |
| GSMUA_Achr11P... | Banana | plastid | 50.0 | 52.86 |
| CDX71698 | Canola | endoplasmic reticulum, golgi | 50.72 | 52.82 |
| Bra007636.1-P | Field mustard | endoplasmic reticulum, golgi | 50.72 | 52.82 |
| KRG97225 | Soybean | endoplasmic reticulum, golgi, plastid | 49.64 | 52.58 |
| Solyc01g096280.1.1 | Tomato | endoplasmic reticulum, golgi | 50.54 | 52.04 |
| CDY37995 | Canola | endoplasmic reticulum | 50.36 | 51.76 |
| Bra032624.1-P | Field mustard | endoplasmic reticulum | 49.82 | 51.69 |
| Bra033278.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 49.64 | 51.4 |
| AT3G61880.2 | Thale cress | endoplasmic reticulum | 51.44 | 51.35 |
| CDY32439 | Canola | endoplasmic reticulum | 49.82 | 51.21 |
| Solyc10g009310.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 48.19 | 50.86 |
| CDX90016 | Canola | endoplasmic reticulum, golgi, plastid | 49.46 | 50.74 |
| AT1G01190.2 | Thale cress | endoplasmic reticulum, golgi | 49.28 | 50.56 |
| KRH06409 | Soybean | extracellular, plasma membrane | 48.74 | 50.37 |
| CDY15193 | Canola | endoplasmic reticulum, golgi, plastid | 48.92 | 50.28 |
| KRH47844 | Soybean | endoplasmic reticulum, golgi, plastid | 48.92 | 50.0 |
| Solyc05g047680.2.1 | Tomato | endoplasmic reticulum, golgi | 46.57 | 48.59 |
| TraesCS2A01G175700.1 | Wheat | endoplasmic reticulum, plasma membrane | 44.04 | 47.1 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016705 | GO:GO:0020037 | GO:GO:0055114 | InterPro:IPR036396 | PFAM:PF00067 | PRINTS:PR00385 |
| PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF46 | SUPFAM:SSF48264 | SignalP:SignalP-TM |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5A01G502000 | EnsemblPlants:TraesCS5A01G502000.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5A:-:667104873..667107017
Molecular Weight (calculated)
59854.3 Da
IEP (calculated)
8.166
GRAVY (calculated)
0.065
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSVQSWWV LPLTLLPAIS GGQDGGIAAT TLPAVATSFA YVAVLACLAW AAAALLYWAH PGGPAWGRYW RGRGQGAGLR RAIPGPKGLP VVGSLGLMSG
101: LAHRSLADEA ARRPGAKRLM ALSLGPVRAV VASHPDVAKE ILDNPAFAAR PLNHAAYSLM FHRSIGFAEH GPYWRALRRV ASGHLFGPRQ VDAFAPYRAR
201: VAGDVVAALR GAGAGVVELR GVLRRASLYY IMRFVFGKEY DVSAPQSSSG EVEELLEMVH EGYELLGKEN WCDYFPGLAA VDPQGIGARC AELMPRVNRF
301: VHGIIREHRA KATLTASGEA PRDFVDILLS LQDSEGLADA DIAAVLWEMI FRGTDAMAVL MEWAMARLVL HRDVQAKVHR ELDEVVGRSS PAAESSLPAL
401: PYLQALIKEA LRVHPPGPLL SWRHRAITDT YVDGHLVPAG TTAMVNQWAM SRDPEVWDAP LEFRPERFLA GGEAPDVSVL GADGRLVPFG SGRRSCPGKS
501: LAMTTVTAWM ATLLHEFEWA PAASSGVDLS EVLRLSCEMA APLQVRVRPR RCSA
101: LAHRSLADEA ARRPGAKRLM ALSLGPVRAV VASHPDVAKE ILDNPAFAAR PLNHAAYSLM FHRSIGFAEH GPYWRALRRV ASGHLFGPRQ VDAFAPYRAR
201: VAGDVVAALR GAGAGVVELR GVLRRASLYY IMRFVFGKEY DVSAPQSSSG EVEELLEMVH EGYELLGKEN WCDYFPGLAA VDPQGIGARC AELMPRVNRF
301: VHGIIREHRA KATLTASGEA PRDFVDILLS LQDSEGLADA DIAAVLWEMI FRGTDAMAVL MEWAMARLVL HRDVQAKVHR ELDEVVGRSS PAAESSLPAL
401: PYLQALIKEA LRVHPPGPLL SWRHRAITDT YVDGHLVPAG TTAMVNQWAM SRDPEVWDAP LEFRPERFLA GGEAPDVSVL GADGRLVPFG SGRRSCPGKS
501: LAMTTVTAWM ATLLHEFEWA PAASSGVDLS EVLRLSCEMA APLQVRVRPR RCSA
001: MRTEIESLWV FALASKFNIY MQQHFASLLV AIAITWFTIT IVFWSTPGGP AWGKYFFTRR FISLDYNRKY KNLIPGPRGF PLVGSMSLRS SHVAHQRIAS
101: VAEMSNAKRL MAFSLGDTKV VVTCHPAVAK EILNSSVFAD RPVDETAYGL MFNRAMGFAP NGTYWRTLRR LGSNHLFNPK QIKQSEDQRR VIATQMVNAF
201: ARNPKSACAV RDLLKTASLC NMMGLVFGRE YELESNNNLE SECLKGLVEE GYDLLGTLNW TDHLPWLAGL DFQQIRFRCS QLVPKVNLLL SRIIHEQRAA
301: TGNFLDMLLS LQGSEKLSES DMVAVLWEMI FRGTDTVAVL VEWVLARIVM HPKVQLTVHD ELDRVVGRSR TVDESDLPSL TYLTAMIKEV LRLHPPGPLL
401: SWARLSITDT SVDGYHVPAG TTAMVNMWAI ARDPHVWEDP LEFKPERFVA KEGEAEFSVF GSDLRLAPFG SGKRVCPGKN LGLTTVSFWV ATLLHEFEWL
501: PSVEANPPDL SEVLRLSCEM ACPLIVNVSS RRKIM
101: VAEMSNAKRL MAFSLGDTKV VVTCHPAVAK EILNSSVFAD RPVDETAYGL MFNRAMGFAP NGTYWRTLRR LGSNHLFNPK QIKQSEDQRR VIATQMVNAF
201: ARNPKSACAV RDLLKTASLC NMMGLVFGRE YELESNNNLE SECLKGLVEE GYDLLGTLNW TDHLPWLAGL DFQQIRFRCS QLVPKVNLLL SRIIHEQRAA
301: TGNFLDMLLS LQGSEKLSES DMVAVLWEMI FRGTDTVAVL VEWVLARIVM HPKVQLTVHD ELDRVVGRSR TVDESDLPSL TYLTAMIKEV LRLHPPGPLL
401: SWARLSITDT SVDGYHVPAG TTAMVNMWAI ARDPHVWEDP LEFKPERFVA KEGEAEFSVF GSDLRLAPFG SGKRVCPGKN LGLTTVSFWV ATLLHEFEWL
501: PSVEANPPDL SEVLRLSCEM ACPLIVNVSS RRKIM
Arabidopsis Description
CYP78A8CYP78A8 [Source:UniProtKB/TrEMBL;Acc:A0A178WIC4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.