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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:
  • cytosol 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plastid
Any Predictor:cytosol, endoplasmic reticulum, golgi, plastid
BaCelLo:cytosol
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90016 Canola endoplasmic reticulum, golgi, plastid 98.52 98.33
Bra033278.1-P Field mustard endoplasmic reticulum, golgi, plastid 97.4 98.13
CDY37995 Canola endoplasmic reticulum 88.5 88.5
AT1G01190.2 Thale cress endoplasmic reticulum, golgi 88.31 88.15
CDY32439 Canola endoplasmic reticulum 87.94 87.94
CDY71495 Canola mitochondrion 51.39 70.48
CDY41546 Canola endoplasmic reticulum, plasma membrane 66.98 68.37
CDX80036 Canola endoplasmic reticulum, plasma membrane, plastid 66.79 68.18
CDY61720 Canola endoplasmic reticulum, plasma membrane 66.05 67.55
CDY27309 Canola endoplasmic reticulum, golgi 65.86 67.36
PGSC0003DMT400014094 Potato cytosol 29.5 66.81
CDX89135 Canola endoplasmic reticulum, vacuole 66.23 66.6
PGSC0003DMT400000685 Potato cytosol 53.8 66.21
CDY57871 Canola endoplasmic reticulum, golgi 65.12 65.85
CDX71698 Canola endoplasmic reticulum, golgi 64.75 65.6
KRG97225 Soybean endoplasmic reticulum, golgi, plastid 61.78 63.67
OQU75572 Sorghum mitochondrion 31.35 63.53
VIT_02s0025g02570.t01 Wine grape endoplasmic reticulum, golgi 61.97 63.5
VIT_15s0048g02900.t01 Wine grape endoplasmic reticulum, plasma membrane 62.15 62.85
Solyc01g096280.1.1 Tomato endoplasmic reticulum, golgi 62.52 62.64
KRH06409 Soybean extracellular, plasma membrane 61.6 61.94
PGSC0003DMT400035609 Potato mitochondrion 49.91 61.42
KRH47844 Soybean endoplasmic reticulum, golgi, plastid 60.67 60.33
Solyc10g009310.2.1 Tomato endoplasmic reticulum, plasma membrane 58.26 59.81
Solyc05g047680.2.1 Tomato endoplasmic reticulum, golgi 56.22 57.06
GSMUA_Achr2P03370_001 Banana endoplasmic reticulum, plasma membrane, plastid 47.5 56.14
TraesCS5A01G316600.1 Wheat endoplasmic reticulum 55.47 55.99
TraesCS5D01G322900.1 Wheat endoplasmic reticulum 55.66 55.76
TraesCS5B01G317200.1 Wheat endoplasmic reticulum 55.29 55.39
TraesCS7B01G168800.1 Wheat plastid 56.59 55.25
TraesCS7D01G271100.1 Wheat endoplasmic reticulum, plasma membrane 56.59 55.25
GSMUA_Achr1P07820_001 Banana endoplasmic reticulum, golgi, plastid 43.97 55.24
HORVU7Hr1G057100.2 Barley endoplasmic reticulum, plasma membrane 56.22 55.19
Os09t0528700-00 Rice endoplasmic reticulum, plasma membrane, plastid 56.59 55.15
OQU80753 Sorghum endoplasmic reticulum 55.66 55.05
Zm00001d053202_P001 Maize endoplasmic reticulum 55.29 54.88
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane, plastid 41.93 54.85
TraesCS7A01G270700.1 Wheat endoplasmic reticulum, plasma membrane 55.84 54.83
Zm00001d032042_P001 Maize endoplasmic reticulum 56.22 54.4
EER99230 Sorghum endoplasmic reticulum 55.47 54.27
HORVU5Hr1G081060.2 Barley mitochondrion 56.4 54.09
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 47.68 53.99
Os08t0547300-01 Rice endoplasmic reticulum, plasma membrane, plastid 55.1 53.9
GSMUA_Achr11P... Banana plastid 51.02 52.48
Zm00001d006193_P001 Maize endoplasmic reticulum, plasma membrane, plastid 54.55 52.41
Os03t0134500-00 Rice endoplasmic reticulum 50.46 49.73
TraesCS4D01G327400.1 Wheat endoplasmic reticulum 50.46 49.28
CDY42442 Canola cytosol 29.5 49.23
HORVU4Hr1G081210.1 Barley endoplasmic reticulum, plasma membrane 50.65 49.1
TraesCS5A01G502000.1 Wheat endoplasmic reticulum 50.28 48.92
EER92912 Sorghum endoplasmic reticulum 49.54 48.63
CDY68665 Canola plastid 43.41 48.55
Zm00001d027537_P001 Maize endoplasmic reticulum 48.98 48.35
CDY16102 Canola plastid 42.86 47.73
CDX96516 Canola endoplasmic reticulum, plasma membrane 46.38 47.17
CDX73053 Canola extracellular, plasma membrane 46.38 47.17
CDX69873 Canola endoplasmic reticulum 45.83 46.25
CDY49134 Canola endoplasmic reticulum, golgi, plasma membrane 45.64 46.24
CDY21618 Canola endoplasmic reticulum 45.83 46.17
CDX98123 Canola endoplasmic reticulum, plasma membrane 44.16 46.12
CDY36404 Canola endoplasmic reticulum, plasma membrane 43.41 45.35
TraesCS4B01G330500.1 Wheat mitochondrion 50.28 45.17
CDY42443 Canola endoplasmic reticulum, plasma membrane 38.22 44.59
HORVU5Hr1G057180.2 Barley cytosol 31.17 42.75
CDY42441 Canola endoplasmic reticulum, plasma membrane 12.99 41.67
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13GO:A0A078FSC5UniProt:A0A078FSC5EnsemblPlants:CDY15193ProteinID:CDY15193
ProteinID:CDY15193.1InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705GO:GO:0020037
GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00085379001InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF46SUPFAM:SSF48264TMHMM:TMhelix
UniParc:UPI0004EE11CF:::::
Description
BnaC05g00720DBnaC05g00720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSC5]
Coordinates
chrLK032052:+:382269..384165
Molecular Weight (calculated)
60617.6 Da
IEP (calculated)
8.637
GRAVY (calculated)
-0.012
Length
539 amino acids
Sequence
(BLAST)
001: MFSLGMRTEI ENLWVFALAS KCNIFIQEHF ISLLIAVAIT WFTFTIVFWS TPGGPAWGRY FFTRRFTSGC NQKNKNLIPG PRGFPLVGSM SLRSSRVAHQ
101: RIAAVAAMRN AKRLMAFSLG DTKVMVTCHP DVAKEILNSS VFADRPVDET AYGLMFNRAM GFAPSGAYWR TLRRLGSNHL FNPKQIKRSE EQRRVIATQM
201: VNVFARNAET AFGVRDLLKT ASLSNMMGLV FGKQYELESN NNVESECLKG LVEEGYDLLG TLNWTDHLPW LGGLDFQQVR FRCSQLVPKV NQLLSRIIHE
301: HRAPTCSFLD VLHSLHDSEK LSESDMVAVL WEMIFRGTDT VAVLIEWVLA RIVMHPKVQS TVHDELDRVV GRSKAVDESD LPSLTYLTAM IKEVLRLHPP
401: GPLLSWARLS ITDTTVDGYH VPAGTTAMVN MWAIARDPHV WENPLEFKPE RFVAKEGEAE FSVLGSDMRL APFGSGKRVC PGKNLGLATV SFWVATLLHE
501: FEWLSSVNAN PPDLSDVLRL SCEMACPLVV NLRSRRKIA
Best Arabidopsis Sequence Match ( AT1G01190.2 )
(BLAST)
001: MFSLNMRTEI ESLWVFALAS KFNIYMQQHF ASLLVAIAIT WFTITIVFWS TPGGPAWGKY FFTRRFISLD YNRKYKNLIP GPRGFPLVGS MSLRSSHVAH
101: QRIASVAEMS NAKRLMAFSL GDTKVVVTCH PAVAKEILNS SVFADRPVDE TAYGLMFNRA MGFAPNGTYW RTLRRLGSNH LFNPKQIKQS EDQRRVIATQ
201: MVNAFARNPK SACAVRDLLK TASLCNMMGL VFGREYELES NNNLESECLK GLVEEGYDLL GTLNWTDHLP WLAGLDFQQI RFRCSQLVPK VNLLLSRIIH
301: EQRAATGNFL DMLLSLQGSE KLSESDMVAV LWEMIFRGTD TVAVLVEWVL ARIVMHPKVQ LTVHDELDRV VGRSRTVDES DLPSLTYLTA MIKEVLRLHP
401: PGPLLSWARL SITDTSVDGY HVPAGTTAMV NMWAIARDPH VWEDPLEFKP ERFVAKEGEA EFSVFGSDLR LAPFGSGKRV CPGKNLGLTT VSFWVATLLH
501: EFEWLPSVEA NPPDLSEVLR LSCEMACPLI VNVSSRRKIM
Arabidopsis Description
CYP78A8CYP78A8 [Source:UniProtKB/TrEMBL;Acc:A0A178WIC4]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.