Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 3
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61720 | Canola | endoplasmic reticulum, plasma membrane | 97.53 | 97.53 |
| CDX80036 | Canola | endoplasmic reticulum, plasma membrane, plastid | 91.65 | 91.48 |
| CDY41546 | Canola | endoplasmic reticulum, plasma membrane | 91.27 | 91.1 |
| AT2G46660.1 | Thale cress | endoplasmic reticulum, plasma membrane | 88.99 | 88.49 |
| CDY71495 | Canola | mitochondrion | 59.2 | 79.39 |
| CDX71698 | Canola | endoplasmic reticulum, golgi | 79.51 | 78.76 |
| CDX89135 | Canola | endoplasmic reticulum, vacuole | 79.89 | 78.54 |
| CDY57871 | Canola | endoplasmic reticulum, golgi | 79.13 | 78.24 |
| PGSC0003DMT400000685 | Potato | cytosol | 58.44 | 70.32 |
| PGSC0003DMT400014094 | Potato | cytosol | 31.12 | 68.91 |
| VIT_15s0048g02900.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 68.12 | 67.35 |
| VIT_02s0025g02570.t01 | Wine grape | endoplasmic reticulum, golgi | 67.17 | 67.3 |
| CDY37995 | Canola | endoplasmic reticulum | 68.5 | 66.98 |
| CDY32439 | Canola | endoplasmic reticulum | 68.31 | 66.79 |
| CDX90016 | Canola | endoplasmic reticulum, golgi, plastid | 67.74 | 66.11 |
| PGSC0003DMT400035609 | Potato | mitochondrion | 54.84 | 65.98 |
| KRG97225 | Soybean | endoplasmic reticulum, golgi, plastid | 65.46 | 65.97 |
| CDY15193 | Canola | endoplasmic reticulum, golgi, plastid | 67.36 | 65.86 |
| Solyc01g096280.1.1 | Tomato | endoplasmic reticulum, golgi | 66.79 | 65.43 |
| OQU75572 | Sorghum | mitochondrion | 33.02 | 65.41 |
| KRH06409 | Soybean | extracellular, plasma membrane | 66.03 | 64.93 |
| Solyc10g009310.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 64.52 | 64.76 |
| KRH47844 | Soybean | endoplasmic reticulum, golgi, plastid | 65.84 | 64.02 |
| Solyc05g047680.2.1 | Tomato | endoplasmic reticulum, golgi | 61.29 | 60.83 |
| GSMUA_Achr2P03370_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 51.23 | 59.21 |
| TraesCS5A01G316600.1 | Wheat | endoplasmic reticulum | 59.96 | 59.18 |
| TraesCS5D01G322900.1 | Wheat | endoplasmic reticulum | 59.58 | 58.36 |
| TraesCS5B01G317200.1 | Wheat | endoplasmic reticulum | 59.39 | 58.18 |
| OQU80753 | Sorghum | endoplasmic reticulum | 60.15 | 58.17 |
| TraesCS7B01G168800.1 | Wheat | plastid | 60.91 | 58.15 |
| Zm00001d053202_P001 | Maize | endoplasmic reticulum | 59.77 | 58.01 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane, plastid | 45.35 | 58.01 |
| TraesCS7D01G271100.1 | Wheat | endoplasmic reticulum, plasma membrane | 60.53 | 57.79 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 51.99 | 57.56 |
| Os09t0528700-00 | Rice | endoplasmic reticulum, plasma membrane, plastid | 60.34 | 57.5 |
| HORVU7Hr1G057100.2 | Barley | endoplasmic reticulum, plasma membrane | 59.77 | 57.38 |
| TraesCS7A01G270700.1 | Wheat | endoplasmic reticulum, plasma membrane | 59.77 | 57.38 |
| GSMUA_Achr1P07820_001 | Banana | endoplasmic reticulum, golgi, plastid | 46.11 | 56.64 |
| HORVU5Hr1G081060.2 | Barley | mitochondrion | 60.15 | 56.41 |
| Zm00001d032042_P001 | Maize | endoplasmic reticulum | 59.58 | 56.37 |
| Os08t0547300-01 | Rice | endoplasmic reticulum, plasma membrane, plastid | 58.63 | 56.08 |
| EER99230 | Sorghum | endoplasmic reticulum | 58.63 | 56.08 |
| GSMUA_Achr11P... | Banana | plastid | 55.03 | 55.34 |
| Zm00001d006193_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 58.63 | 55.08 |
| CDY42442 | Canola | cytosol | 32.83 | 53.56 |
| Zm00001d027537_P001 | Maize | endoplasmic reticulum | 54.65 | 52.75 |
| TraesCS4D01G327400.1 | Wheat | endoplasmic reticulum | 55.22 | 52.72 |
| TraesCS5A01G502000.1 | Wheat | endoplasmic reticulum | 55.41 | 52.71 |
| Os03t0134500-00 | Rice | endoplasmic reticulum | 54.65 | 52.65 |
| EER92912 | Sorghum | endoplasmic reticulum | 54.84 | 52.64 |
| CDY68665 | Canola | plastid | 47.44 | 51.87 |
| HORVU4Hr1G081210.1 | Barley | endoplasmic reticulum, plasma membrane | 54.46 | 51.62 |
| CDY16102 | Canola | plastid | 47.25 | 51.45 |
| CDX98123 | Canola | endoplasmic reticulum, plasma membrane | 49.72 | 50.78 |
| CDY36404 | Canola | endoplasmic reticulum, plasma membrane | 49.15 | 50.19 |
| CDX73053 | Canola | extracellular, plasma membrane | 50.09 | 49.81 |
| CDX69873 | Canola | endoplasmic reticulum | 50.28 | 49.63 |
| CDX96516 | Canola | endoplasmic reticulum, plasma membrane | 49.91 | 49.62 |
| CDY21618 | Canola | endoplasmic reticulum | 50.28 | 49.53 |
| CDY49134 | Canola | endoplasmic reticulum, golgi, plasma membrane | 49.15 | 48.68 |
| TraesCS4B01G330500.1 | Wheat | mitochondrion | 54.65 | 48.0 |
| CDY42443 | Canola | endoplasmic reticulum, plasma membrane | 41.37 | 47.19 |
| HORVU5Hr1G057180.2 | Barley | cytosol | 34.35 | 46.06 |
| CDY42441 | Canola | endoplasmic reticulum, plasma membrane | 12.71 | 39.88 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | GO:A0A078GQ25 | UniProt:A0A078GQ25 | EnsemblPlants:CDY27309 | ProteinID:CDY27309 |
| ProteinID:CDY27309.1 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0020037 |
| GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00037245001 | InterPro:IPR036396 | PFAM:PF00067 | PRINTS:PR00385 |
| PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF46 | SUPFAM:SSF48264 | TMHMM:TMhelix |
| UniParc:UPI0004EDD2FD | SEG:seg | : | : | : | : |
Description
BnaC04g50960DBnaC04g50960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQ25]
Coordinates
chrLK032203:+:27841..29564
Molecular Weight (calculated)
59070.5 Da
IEP (calculated)
7.869
GRAVY (calculated)
0.031
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MATELESSLV FALLSKCTVL SQTNLAFSLL AIVLVWLAIS LFFWTYPGGP AWGKFLSRRL TNKTGTVIPG PRGFPFVGSM SLMSSTLAHR RIADSAERFG
101: AKRLLAFSLG ETRVIVTCNP DVAKEILNSP VFADRPVKES AYSLMFNRAI GFAPHGVYWR TLRRIASNHL FSPKQIKRAE TQRRVIASQV VGFLEKQSTN
201: GVCFVRELLK TASLNNMMCS VFGQEYELDQ DHSELRELVE EGYDLLGTLN WTDHLPWLLE FDPQRIRSRC SALVPKVNRF VSRIISEHRN QTGDTPRDFV
301: DVLLSLHGSD HLSDPDIIAV LWEMIFRGTD TVAVLIEWIL ARIVLHPDIQ STIQSELDLV VGKSRAVDES DLASLPYLTA VVKEVLRMHP PGPLLSWARL
401: AITDTIVDGR FIPAGTTAMV NMWAIAHDPH VWVDPLEFRP ERFVTKEGEV EFSVLGSDLR LAPFGSGRRI CPGKNLGLTT VTFWTATLLH EFEWGVSDGN
501: GVDLSEKLRL SCEMANPLAA KLRRRRT
101: AKRLLAFSLG ETRVIVTCNP DVAKEILNSP VFADRPVKES AYSLMFNRAI GFAPHGVYWR TLRRIASNHL FSPKQIKRAE TQRRVIASQV VGFLEKQSTN
201: GVCFVRELLK TASLNNMMCS VFGQEYELDQ DHSELRELVE EGYDLLGTLN WTDHLPWLLE FDPQRIRSRC SALVPKVNRF VSRIISEHRN QTGDTPRDFV
301: DVLLSLHGSD HLSDPDIIAV LWEMIFRGTD TVAVLIEWIL ARIVLHPDIQ STIQSELDLV VGKSRAVDES DLASLPYLTA VVKEVLRMHP PGPLLSWARL
401: AITDTIVDGR FIPAGTTAMV NMWAIAHDPH VWVDPLEFRP ERFVTKEGEV EFSVLGSDLR LAPFGSGRRI CPGKNLGLTT VTFWTATLLH EFEWGVSDGN
501: GVDLSEKLRL SCEMANPLAA KLRRRRT
001: MATKLESSLI FALLSKCSVL SQTNLAFSLL AVTIIWLAIS LFLWTYPGGP AWGKYLFGRL ISGSYKTGNV IPGPKGFPLV GSMSLMSSTL AHRRIADAAE
101: KFGAKRLMAF SLGETRVIVT CNPDVAKEIL NSPVFADRPV KESAYSLMFN RAIGFAPHGV YWRTLRRIAS NHLFSTKQIR RAETQRRVIS SQMVEFLEKQ
201: SSNEPCFVRE LLKTASLNNM MCSVFGQEYE LEKNHVELRE MVEEGYDLLG TLNWTDHLPW LSEFDPQRLR SRCSTLVPKV NRFVSRIISE HRNQTGDLPR
301: DFVDVLLSLH GSDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DMQSTVQNEL DQVVGKSRAL DESDLASLPY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTIV DGRLVPAGTT AMVNMWAVSH DPHVWVDPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRICPGKNLG FTTVMFWTAM MLHEFEWGPS
501: DGNGVDLSEK LRLSCEMANP LPAKLRRRRS
101: KFGAKRLMAF SLGETRVIVT CNPDVAKEIL NSPVFADRPV KESAYSLMFN RAIGFAPHGV YWRTLRRIAS NHLFSTKQIR RAETQRRVIS SQMVEFLEKQ
201: SSNEPCFVRE LLKTASLNNM MCSVFGQEYE LEKNHVELRE MVEEGYDLLG TLNWTDHLPW LSEFDPQRLR SRCSTLVPKV NRFVSRIISE HRNQTGDLPR
301: DFVDVLLSLH GSDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DMQSTVQNEL DQVVGKSRAL DESDLASLPY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTIV DGRLVPAGTT AMVNMWAVSH DPHVWVDPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRICPGKNLG FTTVMFWTAM MLHEFEWGPS
501: DGNGVDLSEK LRLSCEMANP LPAKLRRRRS
Arabidopsis Description
CYP78A6Cytochrome P450 78A6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNR0]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.