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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 3
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, endoplasmic reticulum, nucleus
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:cytosol
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU75572 Sorghum mitochondrion 48.81 100.0
Zm00001d053202_P001 Maize endoplasmic reticulum 90.64 90.98
Zm00001d032042_P001 Maize endoplasmic reticulum 87.34 85.46
TraesCS7A01G270700.1 Wheat endoplasmic reticulum, plasma membrane 78.9 78.32
TraesCS7D01G271100.1 Wheat endoplasmic reticulum, plasma membrane 79.08 78.08
TraesCS7B01G168800.1 Wheat plastid 78.9 77.9
Os08t0547300-01 Rice endoplasmic reticulum, plasma membrane, plastid 78.53 77.68
HORVU7Hr1G057100.2 Barley endoplasmic reticulum, plasma membrane 77.98 77.41
EER99230 Sorghum endoplasmic reticulum 75.05 74.23
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 56.88 65.13
PGSC0003DMT400000685 Potato cytosol 51.19 63.7
CDY71495 Canola mitochondrion 45.87 63.61
PGSC0003DMT400014094 Potato cytosol 27.52 63.03
GSMUA_Achr2P03370_001 Banana endoplasmic reticulum, plasma membrane, plastid 52.48 62.72
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane, plastid 47.16 62.38
GSMUA_Achr1P07820_001 Banana endoplasmic reticulum, golgi, plastid 48.99 62.24
VIT_02s0025g02570.t01 Wine grape endoplasmic reticulum, golgi 59.45 61.6
VIT_15s0048g02900.t01 Wine grape endoplasmic reticulum, plasma membrane 59.63 60.98
PGSC0003DMT400035609 Potato mitochondrion 48.99 60.96
GSMUA_Achr11P... Banana plastid 58.35 60.69
Bra004517.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 58.53 60.42
CDY61720 Canola endoplasmic reticulum, plasma membrane 58.35 60.34
Bra039267.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 58.35 60.34
CDX89135 Canola endoplasmic reticulum, vacuole 59.27 60.26
CDY41546 Canola endoplasmic reticulum, plasma membrane 58.35 60.23
CDY57871 Canola endoplasmic reticulum, golgi 58.9 60.23
CDY27309 Canola endoplasmic reticulum, golgi 58.17 60.15
CDX71698 Canola endoplasmic reticulum, golgi 58.72 60.15
Bra007636.1-P Field mustard endoplasmic reticulum, golgi 58.72 60.15
CDX80036 Canola endoplasmic reticulum, plasma membrane, plastid 58.17 60.04
AT2G46660.1 Thale cress endoplasmic reticulum, plasma membrane 57.61 59.25
KRG97225 Soybean endoplasmic reticulum, golgi, plastid 56.51 58.89
AT3G61880.2 Thale cress endoplasmic reticulum 59.63 58.56
Solyc01g096280.1.1 Tomato endoplasmic reticulum, golgi 57.61 58.36
KRH06409 Soybean extracellular, plasma membrane 56.33 57.28
Bra033278.1-P Field mustard endoplasmic reticulum, golgi, plastid 55.96 57.01
Solyc10g009310.2.1 Tomato endoplasmic reticulum, plasma membrane 54.5 56.57
Bra032624.1-P Field mustard endoplasmic reticulum 55.23 56.37
CDX90016 Canola endoplasmic reticulum, golgi, plastid 55.78 56.3
KRH47844 Soybean endoplasmic reticulum, golgi, plastid 55.96 56.27
CDY37995 Canola endoplasmic reticulum 55.41 56.03
EER92912 Sorghum endoplasmic reticulum 56.33 55.92
CDY32439 Canola endoplasmic reticulum 55.23 55.84
AT1G01190.2 Thale cress endoplasmic reticulum, golgi 55.23 55.74
CDY15193 Canola endoplasmic reticulum, golgi, plastid 55.05 55.66
Solyc05g047680.2.1 Tomato endoplasmic reticulum, golgi 53.95 55.37
KXG39130 Sorghum endoplasmic reticulum 51.56 54.14
EER97498 Sorghum endoplasmic reticulum, plasma membrane 49.72 52.42
EER91649 Sorghum endoplasmic reticulum, plasma membrane 51.93 51.27
EES08485 Sorghum endoplasmic reticulum 42.75 43.23
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A1Z5RAF0InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491
GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114InterPro:IPR036396EnsemblPlants:OQU80753
ProteinID:OQU80753ProteinID:OQU80753.1PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086
PANTHER:PTHR24298PANTHER:PTHR24298:SF314EnsemblPlantsGene:SORBI_3007G179750SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI000B426BA0
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:+:61276500..61279595
Molecular Weight (calculated)
59007.4 Da
IEP (calculated)
8.115
GRAVY (calculated)
0.184
Length
545 amino acids
Sequence
(BLAST)
001: MAPPTEDCGW LLYLSLAAKC GDPHRLLGFA AVFVAACVVT SLLHWASPGG PAWGWYWWTR RAAGLGIVRA ATIPGPRGLP VVGSMALMTG LAHRKLAAAA
101: QGQASRRRLM AFSLGETRVV VTADPDVARE LLASAAFADR PVKESAYGLL FHRAIGFAPH GAYWRALRRV ASAHLFSPRQ IAASAAQRAA IARQMVDAMT
201: TTTAAGTVVV VARRFLKRAS LHNVMWSVFG RRYDLLAADT DEAAELKALV DEGYDLLGQL NWSDHLPWLA RFDLQRTRAR CSALVPRVNR FVGAIIDEHR
301: ARLGGDTAAV MDFTDVLLSL NGDDKLSDAD MIAVLWEMIF RGTDTVAVLI EWVLARLVLH QDVQRKVHDE LDRVVGPGEA VTESDTASLV YLQAVIKEVL
401: RLHPPGPLLS WARLATSDVN VGGHLVPAGT TAMVNMWAIT HDASVWPEPT EFRPERFVAA AGGEDVVPIM GSDLRLAPFG SGRRSCPGKS LAVATVGFWV
501: ATLLHEFEWL PCGGGGGVDL SEVLRLSCEM AAPLEARVVP RRHAV
Best Arabidopsis Sequence Match ( AT3G61880.2 )
(BLAST)
001: MATKLDTSSL LLALLSKCSL LTQTNLALSL LVASLASLAL SLFFWSHPGG PAWGKYFLHR RRQTTVIPGP RGLPFVGSMS LMSNTLAHRC IAATAEKFRA
101: ERLMAFSLGE TRVIVTCNPD VAKEILNSPV FADRPVKESA YSLMFNRAIG FAPYGVYWRT LRKIASNHLF SPKQIKRSET QRSVIANQIV KCLTKQSNTK
201: GLCFARDLIK TASLNNMMCS VFGKEYELEE EHEEVSELRE LVEEGYDLLG TLNWTDHLPW LSEFDPQRIR SRCSNLVPKV NRFVNRIISD HREQTRDSPS
301: DFVDVLLSLD GPDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DIQSTVHNEL DQIVGRSRAV EESDVVSLVY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTII DGRRVPAGTT AMVNMWAIAH DPHVWENPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRVCPGKNLG LTTVTFWTAT LLHEFEWLTP
501: SDEKTVDLSE KLRLSCEMAN PLAAKLRPRR SFSQKNKIKN KESKGNKKKE SYKKY
Arabidopsis Description
CYP78A9Cytochrome p450 78a9 [Source:UniProtKB/TrEMBL;Acc:F4IX02]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.