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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 1
  • nucleus 1
  • endoplasmic reticulum 5
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:cytosol
EpiLoc:nucleus
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32439 Canola endoplasmic reticulum 100.0 99.07
Bra033278.1-P Field mustard endoplasmic reticulum, golgi, plastid 89.14 88.97
AT1G01190.2 Thale cress endoplasmic reticulum, golgi 87.83 86.85
Bra004517.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 67.79 68.56
Bra039267.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 67.6 68.5
PGSC0003DMT400014094 Potato cytosol 30.34 68.07
PGSC0003DMT400000685 Potato cytosol 55.43 67.58
Bra007636.1-P Field mustard endoplasmic reticulum, golgi 65.73 65.98
VIT_02s0025g02570.t01 Wine grape endoplasmic reticulum, golgi 63.86 64.83
VIT_15s0048g02900.t01 Wine grape endoplasmic reticulum, plasma membrane 63.67 63.79
OQU75572 Sorghum mitochondrion 31.65 63.53
KRG97225 Soybean endoplasmic reticulum, golgi, plastid 61.8 63.1
PGSC0003DMT400035609 Potato mitochondrion 51.69 63.01
Solyc01g096280.1.1 Tomato endoplasmic reticulum, golgi 63.48 63.01
KRH06409 Soybean extracellular, plasma membrane 61.8 61.57
KRH47844 Soybean endoplasmic reticulum, golgi, plastid 61.8 60.89
Solyc10g009310.2.1 Tomato endoplasmic reticulum, plasma membrane 59.18 60.19
Solyc05g047680.2.1 Tomato endoplasmic reticulum, golgi 57.87 58.19
TraesCS5A01G316600.1 Wheat endoplasmic reticulum 56.37 56.37
TraesCS5D01G322900.1 Wheat endoplasmic reticulum 56.74 56.32
TraesCS7B01G168800.1 Wheat plastid 57.68 55.8
TraesCS5B01G317200.1 Wheat endoplasmic reticulum 56.18 55.76
HORVU7Hr1G057100.2 Barley endoplasmic reticulum, plasma membrane 57.12 55.56
Zm00001d032042_P001 Maize endoplasmic reticulum 57.87 55.48
TraesCS7D01G271100.1 Wheat endoplasmic reticulum, plasma membrane 57.3 55.43
Zm00001d053202_P001 Maize endoplasmic reticulum 56.37 55.43
Os09t0528700-00 Rice endoplasmic reticulum, plasma membrane, plastid 57.3 55.33
GSMUA_Achr2P03370_001 Banana endoplasmic reticulum, plasma membrane, plastid 47.19 55.26
OQU80753 Sorghum endoplasmic reticulum 56.37 55.23
TraesCS7A01G270700.1 Wheat endoplasmic reticulum, plasma membrane 56.55 55.01
GSMUA_Achr1P07820_001 Banana endoplasmic reticulum, golgi, plastid 44.01 54.78
HORVU5Hr1G081060.2 Barley mitochondrion 57.49 54.63
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane, plastid 42.13 54.61
Os08t0547300-01 Rice endoplasmic reticulum, plasma membrane, plastid 56.18 54.45
EER99230 Sorghum endoplasmic reticulum 55.43 53.72
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 47.75 53.57
GSMUA_Achr11P... Banana plastid 51.69 52.67
Zm00001d006193_P001 Maize endoplasmic reticulum, plasma membrane, plastid 54.31 51.69
Os03t0134500-00 Rice endoplasmic reticulum 51.69 50.46
EER92912 Sorghum endoplasmic reticulum 51.31 49.91
TraesCS5A01G502000.1 Wheat endoplasmic reticulum 51.69 49.82
TraesCS4D01G327400.1 Wheat endoplasmic reticulum 51.5 49.82
Zm00001d027537_P001 Maize endoplasmic reticulum 50.94 49.82
HORVU4Hr1G081210.1 Barley endoplasmic reticulum, plasma membrane 51.5 49.46
Bra015934.1-P Field mustard endoplasmic reticulum, plasma membrane 47.19 47.55
Bra040720.1-P Field mustard endoplasmic reticulum, plasma membrane 45.32 46.9
Bra009070.1-P Field mustard endoplasmic reticulum 46.82 46.82
Bra008134.1-P Field mustard endoplasmic reticulum, golgi 46.63 46.8
Bra026892.1-P Field mustard endoplasmic reticulum 44.94 46.6
TraesCS4B01G330500.1 Wheat mitochondrion 51.31 45.67
HORVU5Hr1G057180.2 Barley cytosol 31.65 43.0
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EnsemblPlantsGene:Bra032624EnsemblPlants:Bra032624.1EnsemblPlants:Bra032624.1-PInterPro:Cyt_P450
InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497
GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114
InterPro:IPR036396UniProt:M4EUZ1PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086
PANTHER:PTHR24298PANTHER:PTHR24298:SF46SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI00025430FCSEG:seg
Description
AT1G01190 (E=1e-271) CYP78A8 | CYP78A8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding
Coordinates
chrA09:-:36900096..36901787
Molecular Weight (calculated)
60486.3 Da
IEP (calculated)
8.475
GRAVY (calculated)
-0.041
Length
534 amino acids
Sequence
(BLAST)
001: MGTEVENLWV FALASKFNLF MQDHFVYFLV AIAITWFTLS IVFWSVPGGP AWGRYFFTRR FTPYFNRKNK NVIPGPRGFP LVGSMSLRSS HVAHQRIADV
101: AAMNNAKRLM AFSLGDTKVI VTCHPEVAKE ILNSSVFADR PVDETAYGLM FNRAMGFAPN GTYWRMLRRL GSNHLFNPKQ IKRSEEQRRV IATRMVNAFT
201: SNAGNVFGVR DLLKTASLCN MMGLVFGKEY ELETNNNVES EYLKSLVEEG YDLLGTLNWT DHLPWLAGLD FQQIRFRCSQ LVPKVNQLLS RIIHEHRTAA
301: CNFLDVLHSL QGSEKLSESD MVAVLWEMIF RGTDTVAVLM EWVLARIVMH PKIQSTVHEE LDRVVGRSRA VDESDLPSLT YLTAMIKEVL RLHPPGPLLS
401: WARLSIADTT VDGYHVPAGT TAMVNMWAIA RDPHVWENPL EFKPERFVAK EGEAEFSVFG SDLRLAPFGS GKRVCPGKNL GLTTVTFWVA KLLHEFEWLP
501: SVNANPPDLS EVLRLSCEMA CPLVVDVRPR RKTT
Best Arabidopsis Sequence Match ( AT1G01190.2 )
(BLAST)
001: MFSLNMRTEI ESLWVFALAS KFNIYMQQHF ASLLVAIAIT WFTITIVFWS TPGGPAWGKY FFTRRFISLD YNRKYKNLIP GPRGFPLVGS MSLRSSHVAH
101: QRIASVAEMS NAKRLMAFSL GDTKVVVTCH PAVAKEILNS SVFADRPVDE TAYGLMFNRA MGFAPNGTYW RTLRRLGSNH LFNPKQIKQS EDQRRVIATQ
201: MVNAFARNPK SACAVRDLLK TASLCNMMGL VFGREYELES NNNLESECLK GLVEEGYDLL GTLNWTDHLP WLAGLDFQQI RFRCSQLVPK VNLLLSRIIH
301: EQRAATGNFL DMLLSLQGSE KLSESDMVAV LWEMIFRGTD TVAVLVEWVL ARIVMHPKVQ LTVHDELDRV VGRSRTVDES DLPSLTYLTA MIKEVLRLHP
401: PGPLLSWARL SITDTSVDGY HVPAGTTAMV NMWAIARDPH VWEDPLEFKP ERFVAKEGEA EFSVFGSDLR LAPFGSGKRV CPGKNLGLTT VSFWVATLLH
501: EFEWLPSVEA NPPDLSEVLR LSCEMACPLI VNVSSRRKIM
Arabidopsis Description
CYP78A8CYP78A8 [Source:UniProtKB/TrEMBL;Acc:A0A178WIC4]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.