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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:
  • nucleus 2
  • plastid 3
  • endoplasmic reticulum 4
  • extracellular 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, plastid
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX80036 Canola endoplasmic reticulum, plasma membrane, plastid 98.3 98.3
CDY41546 Canola endoplasmic reticulum, plasma membrane 97.92 97.92
Bra039267.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 91.29 91.46
AT2G46660.1 Thale cress endoplasmic reticulum, plasma membrane 88.07 87.74
Bra007636.1-P Field mustard endoplasmic reticulum, golgi 78.41 77.82
PGSC0003DMT400000685 Potato cytosol 58.14 70.09
PGSC0003DMT400014094 Potato cytosol 31.44 69.75
VIT_15s0048g02900.t01 Wine grape endoplasmic reticulum, plasma membrane 68.94 68.29
Bra032624.1-P Field mustard endoplasmic reticulum 68.56 67.79
Bra033278.1-P Field mustard endoplasmic reticulum, golgi, plastid 68.56 67.66
VIT_02s0025g02570.t01 Wine grape endoplasmic reticulum, golgi 67.23 67.49
PGSC0003DMT400035609 Potato mitochondrion 54.92 66.21
KRG97225 Soybean endoplasmic reticulum, golgi, plastid 65.34 65.97
OQU75572 Sorghum mitochondrion 33.14 65.79
Solyc01g096280.1.1 Tomato endoplasmic reticulum, golgi 66.86 65.61
Solyc10g009310.2.1 Tomato endoplasmic reticulum, plasma membrane 64.96 65.33
KRH06409 Soybean extracellular, plasma membrane 65.15 64.18
KRH47844 Soybean endoplasmic reticulum, golgi, plastid 64.96 63.28
Solyc05g047680.2.1 Tomato endoplasmic reticulum, golgi 61.17 60.83
TraesCS5A01G316600.1 Wheat endoplasmic reticulum 59.66 58.99
GSMUA_Achr2P03370_001 Banana endoplasmic reticulum, plasma membrane, plastid 50.57 58.55
OQU80753 Sorghum endoplasmic reticulum 60.42 58.53
Zm00001d053202_P001 Maize endoplasmic reticulum 60.04 58.38
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 52.46 58.19
TraesCS5D01G322900.1 Wheat endoplasmic reticulum 59.28 58.18
TraesCS7B01G168800.1 Wheat plastid 60.8 58.15
TraesCS5B01G317200.1 Wheat endoplasmic reticulum 59.09 57.99
TraesCS7D01G271100.1 Wheat endoplasmic reticulum, plasma membrane 60.61 57.97
Os09t0528700-00 Rice endoplasmic reticulum, plasma membrane, plastid 60.61 57.87
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane, plastid 45.08 57.77
TraesCS7A01G270700.1 Wheat endoplasmic reticulum, plasma membrane 60.04 57.74
HORVU7Hr1G057100.2 Barley endoplasmic reticulum, plasma membrane 59.66 57.38
Zm00001d032042_P001 Maize endoplasmic reticulum 59.85 56.73
Os08t0547300-01 Rice endoplasmic reticulum, plasma membrane, plastid 59.09 56.62
EER99230 Sorghum endoplasmic reticulum 58.71 56.26
GSMUA_Achr1P07820_001 Banana endoplasmic reticulum, golgi, plastid 45.64 56.18
HORVU5Hr1G081060.2 Barley mitochondrion 59.66 56.05
Zm00001d006193_P001 Maize endoplasmic reticulum, plasma membrane, plastid 58.71 55.26
GSMUA_Achr11P... Banana plastid 54.73 55.15
Os03t0134500-00 Rice endoplasmic reticulum 55.11 53.2
Zm00001d027537_P001 Maize endoplasmic reticulum 54.55 52.75
TraesCS4D01G327400.1 Wheat endoplasmic reticulum 55.11 52.72
EER92912 Sorghum endoplasmic reticulum 54.73 52.64
TraesCS5A01G502000.1 Wheat endoplasmic reticulum 55.11 52.53
HORVU4Hr1G081210.1 Barley endoplasmic reticulum, plasma membrane 54.36 51.62
Bra026892.1-P Field mustard endoplasmic reticulum 49.24 50.49
Bra040720.1-P Field mustard endoplasmic reticulum, plasma membrane 48.67 49.81
Bra015934.1-P Field mustard endoplasmic reticulum, plasma membrane 49.62 49.43
Bra008134.1-P Field mustard endoplasmic reticulum, golgi 49.05 48.68
Bra009070.1-P Field mustard endoplasmic reticulum 49.05 48.5
TraesCS4B01G330500.1 Wheat mitochondrion 54.36 47.83
HORVU5Hr1G057180.2 Barley cytosol 34.28 46.06
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EnsemblPlantsGene:Bra004517EnsemblPlants:Bra004517.1EnsemblPlants:Bra004517.1-PInterPro:Cyt_P450
InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497
GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114
InterPro:IPR036396UniProt:M4CJY3PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086
PANTHER:PTHR24298PANTHER:PTHR24298:SF46SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI00025473BF:
Description
AT2G46660 (E=1e-273) CYP78A6 | CYP78A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding
Coordinates
chrA05:+:592779..594552
Molecular Weight (calculated)
58826.2 Da
IEP (calculated)
7.022
GRAVY (calculated)
0.036
Length
528 amino acids
Sequence
(BLAST)
001: MATELESSLI FALLSKCSGL SQTSLAFSLL AIVIVWLAFS LFFWTYPGGP AWGKHLSRRL TNKTGTVIPG PRGFPFVGSM SLMSSTLAHH RIAEAAERYG
101: AKRLMAFSLG ETRVIVTCNP DVAKEILNSP IFADRPVKES AYSLMFNRAI GFAPHGVYWR TLRRIASNHL FSPKQIKGAE TQSRVIASQM VGLLEKQSST
201: NALCFVRELL KTASLSNMMC SVFGQEYELD QDHVELRELV EEGYDLLGEL NWTDHLPWLS EFDPQRIRSR CSALVPKVNR FVSRIISEHR RQTGDSPRDF
301: VDVLLSLHGS DQLSDPDIIA VLWEMIFRGT DTVAVLVEWI LARMVLHPDI QSTVQNELDS VVGKSRAVDE SDLVSLPYLT AMVKEVLRMH PPGPLLSWAR
401: LAITDTIVDG CLVPAGTTAM VNMWAIAHDP HVWVDPLEFK PERFVAKEGE VEFSVLGSDL RLAPFGSGRR ICPGKNLGLT TVTFWTATLL HEFEWGSSVG
501: NGVDLSEKLR LSCEMATPLA AQVRRRRS
Best Arabidopsis Sequence Match ( AT2G46660.1 )
(BLAST)
001: MATKLESSLI FALLSKCSVL SQTNLAFSLL AVTIIWLAIS LFLWTYPGGP AWGKYLFGRL ISGSYKTGNV IPGPKGFPLV GSMSLMSSTL AHRRIADAAE
101: KFGAKRLMAF SLGETRVIVT CNPDVAKEIL NSPVFADRPV KESAYSLMFN RAIGFAPHGV YWRTLRRIAS NHLFSTKQIR RAETQRRVIS SQMVEFLEKQ
201: SSNEPCFVRE LLKTASLNNM MCSVFGQEYE LEKNHVELRE MVEEGYDLLG TLNWTDHLPW LSEFDPQRLR SRCSTLVPKV NRFVSRIISE HRNQTGDLPR
301: DFVDVLLSLH GSDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DMQSTVQNEL DQVVGKSRAL DESDLASLPY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTIV DGRLVPAGTT AMVNMWAVSH DPHVWVDPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRICPGKNLG FTTVMFWTAM MLHEFEWGPS
501: DGNGVDLSEK LRLSCEMANP LPAKLRRRRS
Arabidopsis Description
CYP78A6Cytochrome P450 78A6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNR0]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.