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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 3
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, plastid
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004517.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 98.3 98.3
CDY41546 Canola endoplasmic reticulum, plasma membrane 97.92 97.92
CDY27309 Canola endoplasmic reticulum, golgi 91.48 91.65
CDY61720 Canola endoplasmic reticulum, plasma membrane 91.29 91.46
AT2G46660.1 Thale cress endoplasmic reticulum, plasma membrane 88.26 87.92
CDY71495 Canola mitochondrion 59.28 79.64
CDX89135 Canola endoplasmic reticulum, vacuole 79.55 78.36
CDX71698 Canola endoplasmic reticulum, golgi 78.79 78.2
CDY57871 Canola endoplasmic reticulum, golgi 78.79 78.05
PGSC0003DMT400000685 Potato cytosol 58.71 70.78
PGSC0003DMT400014094 Potato cytosol 31.25 69.33
VIT_15s0048g02900.t01 Wine grape endoplasmic reticulum, plasma membrane 68.75 68.11
CDY37995 Canola endoplasmic reticulum 68.75 67.35
CDY32439 Canola endoplasmic reticulum 68.56 67.16
VIT_02s0025g02570.t01 Wine grape endoplasmic reticulum, golgi 66.86 67.11
CDX90016 Canola endoplasmic reticulum, golgi, plastid 68.37 66.85
CDY15193 Canola endoplasmic reticulum, golgi, plastid 68.18 66.79
PGSC0003DMT400035609 Potato mitochondrion 54.92 66.21
Solyc01g096280.1.1 Tomato endoplasmic reticulum, golgi 67.23 65.99
KRG97225 Soybean endoplasmic reticulum, golgi, plastid 65.34 65.97
OQU75572 Sorghum mitochondrion 32.95 65.41
Solyc10g009310.2.1 Tomato endoplasmic reticulum, plasma membrane 64.96 65.33
KRH06409 Soybean extracellular, plasma membrane 65.15 64.18
KRH47844 Soybean endoplasmic reticulum, golgi, plastid 64.96 63.28
Solyc05g047680.2.1 Tomato endoplasmic reticulum, golgi 61.17 60.83
TraesCS5A01G316600.1 Wheat endoplasmic reticulum 59.09 58.43
TraesCS7B01G168800.1 Wheat plastid 60.98 58.33
OQU80753 Sorghum endoplasmic reticulum 60.04 58.17
GSMUA_Achr2P03370_001 Banana endoplasmic reticulum, plasma membrane, plastid 50.19 58.11
Zm00001d053202_P001 Maize endoplasmic reticulum 59.66 58.01
TraesCS7D01G271100.1 Wheat endoplasmic reticulum, plasma membrane 60.42 57.79
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 52.08 57.77
TraesCS5D01G322900.1 Wheat endoplasmic reticulum 58.71 57.62
TraesCS7A01G270700.1 Wheat endoplasmic reticulum, plasma membrane 59.85 57.56
TraesCS5B01G317200.1 Wheat endoplasmic reticulum 58.52 57.43
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane, plastid 44.7 57.28
HORVU7Hr1G057100.2 Barley endoplasmic reticulum, plasma membrane 59.47 57.19
Os09t0528700-00 Rice endoplasmic reticulum, plasma membrane, plastid 59.66 56.96
Zm00001d032042_P001 Maize endoplasmic reticulum 59.47 56.37
Os08t0547300-01 Rice endoplasmic reticulum, plasma membrane, plastid 58.33 55.9
EER99230 Sorghum endoplasmic reticulum 58.14 55.72
GSMUA_Achr1P07820_001 Banana endoplasmic reticulum, golgi, plastid 45.27 55.71
HORVU5Hr1G081060.2 Barley mitochondrion 59.28 55.69
GSMUA_Achr11P... Banana plastid 54.36 54.77
Zm00001d006193_P001 Maize endoplasmic reticulum, plasma membrane, plastid 58.14 54.72
CDY42442 Canola cytosol 32.58 53.25
Os03t0134500-00 Rice endoplasmic reticulum 54.92 53.02
Zm00001d027537_P001 Maize endoplasmic reticulum 54.36 52.56
TraesCS4D01G327400.1 Wheat endoplasmic reticulum 54.92 52.54
EER92912 Sorghum endoplasmic reticulum 54.55 52.46
TraesCS5A01G502000.1 Wheat endoplasmic reticulum 54.92 52.35
CDY68665 Canola plastid 47.54 52.07
CDY16102 Canola plastid 47.16 51.45
HORVU4Hr1G081210.1 Barley endoplasmic reticulum, plasma membrane 54.17 51.44
CDX98123 Canola endoplasmic reticulum, plasma membrane 49.43 50.58
CDY36404 Canola endoplasmic reticulum, plasma membrane 48.67 49.81
CDX96516 Canola endoplasmic reticulum, plasma membrane 49.81 49.62
CDX73053 Canola extracellular, plasma membrane 49.81 49.62
CDY49134 Canola endoplasmic reticulum, golgi, plasma membrane 49.24 48.87
CDY21618 Canola endoplasmic reticulum 49.24 48.6
CDX69873 Canola endoplasmic reticulum 49.05 48.5
TraesCS4B01G330500.1 Wheat mitochondrion 54.36 47.83
CDY42443 Canola endoplasmic reticulum, plasma membrane 41.29 47.19
HORVU5Hr1G057180.2 Barley cytosol 34.28 46.06
CDY42441 Canola endoplasmic reticulum, plasma membrane 13.07 41.07
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13GO:A0A078CSB1EnsemblPlants:CDX80036ProteinID:CDX80036ProteinID:CDX80036.1
InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016705GO:GO:0020037
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00132918001InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463
ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF46SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0004EDFF97
Description
BnaA05g01200D
Coordinates
chrLK031819:-:1437674..1439657
Molecular Weight (calculated)
58993.3 Da
IEP (calculated)
7.383
GRAVY (calculated)
0.006
Length
528 amino acids
Sequence
(BLAST)
001: MATELESSLI FALLSKCSGL SQTSLAFSLL AIVIVWLAFS LFFWTYPGGP AWGKHLSRRL TNKTGTVIPG PRGFPFVGSM SIMSSTLAHH RIAEAAERYG
101: AKRLMSFSLG ETRVIVTCNP DVAKEILNSP VFADRPVKES AYSLMFNRAI GFAPHGVYWR TLRRIASNHL FSPKQIKRAE TQRRVIASQM VGLLEKQSST
201: NGLCFVRELL KTASLSNMMC SVFGQEYELD QDHVELRELV EEGYDLLGEL NWTDHLPWLS EFDPQRIRSR CSALVPKVNR FVSRIISEHR RQTGDSPRDF
301: VDVLLSLHGS DQLSDPDIIA VLWEMIFRGT DTVAVLVEWI LARMVLHPDI QSTVQNELDS VVGKSRAVDE SDLVSLPYLT AMVKEVLRMH PPGPLLSWAR
401: LAITDTIVDG CLVPAGTTAM VNMWAIAHDP HVWVDPLEFK PERFVAKEGE VEFSVLGSDL RLAPFGSGRR ICPGKNLGLT TVTFWTATLL HEFEWGSSVG
501: NGVDLSEKLR LSCELANPLS AQVRRRRS
Best Arabidopsis Sequence Match ( AT2G46660.1 )
(BLAST)
001: MATKLESSLI FALLSKCSVL SQTNLAFSLL AVTIIWLAIS LFLWTYPGGP AWGKYLFGRL ISGSYKTGNV IPGPKGFPLV GSMSLMSSTL AHRRIADAAE
101: KFGAKRLMAF SLGETRVIVT CNPDVAKEIL NSPVFADRPV KESAYSLMFN RAIGFAPHGV YWRTLRRIAS NHLFSTKQIR RAETQRRVIS SQMVEFLEKQ
201: SSNEPCFVRE LLKTASLNNM MCSVFGQEYE LEKNHVELRE MVEEGYDLLG TLNWTDHLPW LSEFDPQRLR SRCSTLVPKV NRFVSRIISE HRNQTGDLPR
301: DFVDVLLSLH GSDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DMQSTVQNEL DQVVGKSRAL DESDLASLPY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTIV DGRLVPAGTT AMVNMWAVSH DPHVWVDPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRICPGKNLG FTTVMFWTAM MLHEFEWGPS
501: DGNGVDLSEK LRLSCEMANP LPAKLRRRRS
Arabidopsis Description
CYP78A6Cytochrome P450 78A6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNR0]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.