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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 5
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY57871 Canola endoplasmic reticulum, golgi 97.74 97.56
CDX89135 Canola endoplasmic reticulum, vacuole 92.29 91.6
CDY71495 Canola mitochondrion 66.92 90.59
AT3G61880.2 Thale cress endoplasmic reticulum 90.98 87.21
CDY27309 Canola endoplasmic reticulum, golgi 78.76 79.51
CDY61720 Canola endoplasmic reticulum, plasma membrane 78.57 79.32
CDY41546 Canola endoplasmic reticulum, plasma membrane 78.57 79.17
CDX80036 Canola endoplasmic reticulum, plasma membrane, plastid 78.2 78.79
PGSC0003DMT400014094 Potato cytosol 31.02 69.33
PGSC0003DMT400000685 Potato cytosol 56.95 69.18
PGSC0003DMT400035609 Potato mitochondrion 54.89 66.67
VIT_15s0048g02900.t01 Wine grape endoplasmic reticulum, plasma membrane 66.17 66.04
KRG97225 Soybean endoplasmic reticulum, golgi, plastid 64.66 65.77
CDY37995 Canola endoplasmic reticulum 66.35 65.49
OQU75572 Sorghum mitochondrion 32.71 65.41
KRH06409 Soybean extracellular, plasma membrane 65.6 65.11
CDX90016 Canola endoplasmic reticulum, golgi, plastid 65.98 65.0
CDY32439 Canola endoplasmic reticulum 65.79 64.94
CDY15193 Canola endoplasmic reticulum, golgi, plastid 65.6 64.75
KRH47844 Soybean endoplasmic reticulum, golgi, plastid 65.79 64.58
VIT_02s0025g02570.t01 Wine grape endoplasmic reticulum, golgi 63.72 64.45
Solyc01g096280.1.1 Tomato endoplasmic reticulum, golgi 64.85 64.13
Solyc10g009310.2.1 Tomato endoplasmic reticulum, plasma membrane 63.16 64.0
Solyc05g047680.2.1 Tomato endoplasmic reticulum, golgi 60.71 60.83
TraesCS5A01G316600.1 Wheat endoplasmic reticulum 59.96 59.74
TraesCS5D01G322900.1 Wheat endoplasmic reticulum 59.96 59.29
TraesCS5B01G317200.1 Wheat endoplasmic reticulum 59.4 58.74
OQU80753 Sorghum endoplasmic reticulum 60.15 58.72
Os09t0528700-00 Rice endoplasmic reticulum, plasma membrane, plastid 60.71 58.41
GSMUA_Achr2P03370_001 Banana endoplasmic reticulum, plasma membrane, plastid 50.0 58.33
TraesCS7B01G168800.1 Wheat plastid 60.53 58.33
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 52.07 58.19
TraesCS7D01G271100.1 Wheat endoplasmic reticulum, plasma membrane 60.34 58.15
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane, plastid 44.92 58.01
HORVU7Hr1G057100.2 Barley endoplasmic reticulum, plasma membrane 59.77 57.92
TraesCS7A01G270700.1 Wheat endoplasmic reticulum, plasma membrane 59.59 57.74
Os08t0547300-01 Rice endoplasmic reticulum, plasma membrane, plastid 59.77 57.71
Zm00001d053202_P001 Maize endoplasmic reticulum 58.83 57.64
EER99230 Sorghum endoplasmic reticulum 59.4 57.35
Zm00001d032042_P001 Maize endoplasmic reticulum 59.59 56.91
HORVU5Hr1G081060.2 Barley mitochondrion 59.96 56.76
GSMUA_Achr1P07820_001 Banana endoplasmic reticulum, golgi, plastid 45.49 56.41
GSMUA_Achr11P... Banana plastid 55.08 55.92
Zm00001d006193_P001 Maize endoplasmic reticulum, plasma membrane, plastid 58.27 55.26
CDY42442 Canola cytosol 32.89 54.18
CDY68665 Canola plastid 46.62 51.45
TraesCS4D01G327400.1 Wheat endoplasmic reticulum 53.01 51.09
Os03t0134500-00 Rice endoplasmic reticulum 52.44 51.01
CDY16102 Canola plastid 46.24 50.83
TraesCS5A01G502000.1 Wheat endoplasmic reticulum 52.82 50.72
EER92912 Sorghum endoplasmic reticulum 52.07 50.46
HORVU4Hr1G081210.1 Barley endoplasmic reticulum, plasma membrane 52.63 50.36
Zm00001d027537_P001 Maize endoplasmic reticulum 51.5 50.18
CDX69873 Canola endoplasmic reticulum 50.0 49.81
CDY21618 Canola endoplasmic reticulum 49.62 49.35
CDY49134 Canola endoplasmic reticulum, golgi, plasma membrane 49.25 49.25
CDX98123 Canola endoplasmic reticulum, plasma membrane 47.74 49.22
CDX96516 Canola endoplasmic reticulum, plasma membrane 48.87 49.06
CDX73053 Canola extracellular, plasma membrane 48.87 49.06
CDY36404 Canola endoplasmic reticulum, plasma membrane 47.56 49.03
CDY42443 Canola endoplasmic reticulum, plasma membrane 40.98 47.19
TraesCS4B01G330500.1 Wheat mitochondrion 52.63 46.67
HORVU5Hr1G057180.2 Barley cytosol 34.02 46.06
CDY42441 Canola endoplasmic reticulum, plasma membrane 12.78 40.48
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13GO:A0A078C9L2EnsemblPlants:CDX71698ProteinID:CDX71698ProteinID:CDX71698.1
InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016705GO:GO:0020037
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00155381001InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463
ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF46SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0004EE7DB1
SEG:seg:::::
Description
BnaC08g31760D
Coordinates
chrLK031795:+:21245..23005
Molecular Weight (calculated)
59557.2 Da
IEP (calculated)
8.274
GRAVY (calculated)
-0.052
Length
532 amino acids
Sequence
(BLAST)
001: MATKLDTSSL LFALLSKCSL LTQTHLALSL LVASMACLAV SLFYWSHPGG PAWGKYFLHR RHRTAVIPGP RGLPFFGSMS LMSNALAHRC IAAAAEKFGA
101: KRLLAFSLGD TRVIVTCNPD VAKEILNSPV FADRPVKESA YSLMFSRAIG FAPYGVYWRT LRKIASSHLF SPKQIKRSET QRRVIANQIV KCLEKQSSGN
201: EGLCFARDLI KTASLNNMMC SVFGKEYELE HEHDEVNELR GLVEEGYDLL GTLNWTDHLP WLSEFDPQRI RSRCSNLVPK VNRFVNRIIS DHRDQTRDSP
301: SDFVDVLLSL DGQDKLSDPD MVAVLWEMIF RGTDTVAVLI EWILARMVLH PDIQSMVHNE LDQNVGRSRA VEESDVASLT YLTAVVKEVL RLHPPGPLLS
401: WARLAITDTI IDGRRVPAGT TAMVNMWAIA HDPQVWENPL EFKPARFVAK EGEVEFSVLG SDLRLAPFGS GRRVCPGKNL GLSTVMYWIA TLLHEFEWLA
501: PTGEKTVDLS EKLRLSCEMA NPLAVKLRGR RG
Best Arabidopsis Sequence Match ( AT3G61880.2 )
(BLAST)
001: MATKLDTSSL LLALLSKCSL LTQTNLALSL LVASLASLAL SLFFWSHPGG PAWGKYFLHR RRQTTVIPGP RGLPFVGSMS LMSNTLAHRC IAATAEKFRA
101: ERLMAFSLGE TRVIVTCNPD VAKEILNSPV FADRPVKESA YSLMFNRAIG FAPYGVYWRT LRKIASNHLF SPKQIKRSET QRSVIANQIV KCLTKQSNTK
201: GLCFARDLIK TASLNNMMCS VFGKEYELEE EHEEVSELRE LVEEGYDLLG TLNWTDHLPW LSEFDPQRIR SRCSNLVPKV NRFVNRIISD HREQTRDSPS
301: DFVDVLLSLD GPDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DIQSTVHNEL DQIVGRSRAV EESDVVSLVY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTII DGRRVPAGTT AMVNMWAIAH DPHVWENPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRVCPGKNLG LTTVTFWTAT LLHEFEWLTP
501: SDEKTVDLSE KLRLSCEMAN PLAAKLRPRR SFSQKNKIKN KESKGNKKKE SYKKY
Arabidopsis Description
CYP78A9Cytochrome p450 78a9 [Source:UniProtKB/TrEMBL;Acc:F4IX02]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.