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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plastid
Any Predictor:endoplasmic reticulum, golgi, nucleus, plastid
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033278.1-P Field mustard endoplasmic reticulum, golgi, plastid 98.89 99.81
CDY15193 Canola endoplasmic reticulum, golgi, plastid 98.33 98.52
CDY37995 Canola endoplasmic reticulum 89.26 89.42
AT1G01190.2 Thale cress endoplasmic reticulum, golgi 88.89 88.89
CDY32439 Canola endoplasmic reticulum 88.7 88.87
CDY71495 Canola mitochondrion 51.67 70.99
CDY41546 Canola endoplasmic reticulum, plasma membrane 67.04 68.56
CDX80036 Canola endoplasmic reticulum, plasma membrane, plastid 66.85 68.37
CDY61720 Canola endoplasmic reticulum, plasma membrane 66.3 67.93
CDY27309 Canola endoplasmic reticulum, golgi 66.11 67.74
CDX89135 Canola endoplasmic reticulum, vacuole 66.67 67.16
PGSC0003DMT400000685 Potato cytosol 54.26 66.89
PGSC0003DMT400014094 Potato cytosol 29.44 66.81
CDY57871 Canola endoplasmic reticulum, golgi 65.37 66.23
CDX71698 Canola endoplasmic reticulum, golgi 65.0 65.98
OQU75572 Sorghum mitochondrion 31.67 64.29
VIT_02s0025g02570.t01 Wine grape endoplasmic reticulum, golgi 62.41 64.07
KRG97225 Soybean endoplasmic reticulum, golgi, plastid 62.04 64.05
VIT_15s0048g02900.t01 Wine grape endoplasmic reticulum, plasma membrane 62.41 63.23
Solyc01g096280.1.1 Tomato endoplasmic reticulum, golgi 62.96 63.2
KRH06409 Soybean extracellular, plasma membrane 61.85 62.31
PGSC0003DMT400035609 Potato mitochondrion 50.37 62.1
KRH47844 Soybean endoplasmic reticulum, golgi, plastid 60.93 60.7
Solyc10g009310.2.1 Tomato endoplasmic reticulum, plasma membrane 57.96 59.62
Solyc05g047680.2.1 Tomato endoplasmic reticulum, golgi 56.67 57.63
GSMUA_Achr2P03370_001 Banana endoplasmic reticulum, plasma membrane, plastid 47.96 56.8
TraesCS5A01G316600.1 Wheat endoplasmic reticulum 56.11 56.74
TraesCS5D01G322900.1 Wheat endoplasmic reticulum 56.3 56.51
TraesCS5B01G317200.1 Wheat endoplasmic reticulum 55.93 56.13
TraesCS7B01G168800.1 Wheat plastid 57.22 55.98
TraesCS7D01G271100.1 Wheat endoplasmic reticulum, plasma membrane 57.22 55.98
GSMUA_Achr1P07820_001 Banana endoplasmic reticulum, golgi, plastid 44.44 55.94
HORVU7Hr1G057100.2 Barley endoplasmic reticulum, plasma membrane 56.85 55.92
Os09t0528700-00 Rice endoplasmic reticulum, plasma membrane, plastid 57.22 55.88
OQU80753 Sorghum endoplasmic reticulum 56.3 55.78
Zm00001d053202_P001 Maize endoplasmic reticulum 55.93 55.62
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane, plastid 42.41 55.58
TraesCS7A01G270700.1 Wheat endoplasmic reticulum, plasma membrane 56.48 55.56
Zm00001d032042_P001 Maize endoplasmic reticulum 56.85 55.12
EER99230 Sorghum endoplasmic reticulum 56.11 54.99
HORVU5Hr1G081060.2 Barley mitochondrion 57.04 54.8
Os08t0547300-01 Rice endoplasmic reticulum, plasma membrane, plastid 55.74 54.63
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 48.15 54.62
Zm00001d006193_P001 Maize endoplasmic reticulum, plasma membrane, plastid 55.19 53.12
GSMUA_Achr11P... Banana plastid 51.48 53.05
Os03t0134500-00 Rice endoplasmic reticulum 50.93 50.27
CDY42442 Canola cytosol 29.81 49.85
TraesCS4D01G327400.1 Wheat endoplasmic reticulum 50.93 49.82
HORVU4Hr1G081210.1 Barley endoplasmic reticulum, plasma membrane 51.11 49.64
TraesCS5A01G502000.1 Wheat endoplasmic reticulum 50.74 49.46
EER92912 Sorghum endoplasmic reticulum 50.0 49.18
CDY68665 Canola plastid 43.89 49.17
Zm00001d027537_P001 Maize endoplasmic reticulum 49.44 48.9
CDY16102 Canola plastid 43.33 48.35
CDX96516 Canola endoplasmic reticulum, plasma membrane 46.67 47.55
CDX73053 Canola extracellular, plasma membrane 46.67 47.55
CDX69873 Canola endoplasmic reticulum 46.48 47.0
CDY21618 Canola endoplasmic reticulum 46.48 46.92
CDX98123 Canola endoplasmic reticulum, plasma membrane 44.63 46.71
CDY49134 Canola endoplasmic reticulum, golgi, plasma membrane 45.93 46.62
CDY36404 Canola endoplasmic reticulum, plasma membrane 43.89 45.93
TraesCS4B01G330500.1 Wheat mitochondrion 50.74 45.67
CDY42443 Canola endoplasmic reticulum, plasma membrane 38.33 44.81
HORVU5Hr1G057180.2 Barley cytosol 31.48 43.26
CDY42441 Canola endoplasmic reticulum, plasma membrane 12.96 41.67
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13GO:A0A078DLB1EnsemblPlants:CDX90016ProteinID:CDX90016ProteinID:CDX90016.1
InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016705GO:GO:0020037
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00150515001InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463
ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF46SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0004EECE9B
Description
BnaA10g00660D
Coordinates
chrLK031861:-:1274907..1276805
Molecular Weight (calculated)
60732.7 Da
IEP (calculated)
8.637
GRAVY (calculated)
0.002
Length
540 amino acids
Sequence
(BLAST)
001: MFSLGMRTEI ENLWVFALAS KCNIFIQEHF ISLLIAVAIT WFTLTIVFWS TPGGPAWGRY FFTRRFTSGC NQKNKNIIPG PRGFPLVGSM SLRSSRVAHQ
101: RIAAVAAMRN AKRLMAFSLG DTKVVVTCHP DVAKEILNSS VFADRPVDET AYGLMFNRAM GFAPNGAYWR TLRRLGSNHL FNPKQIKRSE EQRRVIATQM
201: VNVFARNAET AFGVRDLLKT ASLSNMMGLV FGKQYELESN NNVESECLKG LVEEGYDLLG TLNWTDHLPW LAGLDFQQVR FRCSQLVPKV NQLLSRIIHE
301: HRALTCSFLD VLQHSLHDSE KLSESDMVAV LWEMIFRGTD TVAVLIEWVL ARIVMHPKVQ STVHDELDRV VGRSKAVDES DLPSLTYLTA MIKEVLRLHP
401: PGPLLSWARL SITDTTVDGY HVPAGTTAMV NMWAIARDPH VWENPLEFKP ERFVAKEGEA EFSVLGSDLR LAPFGSGKRV CPGKNLGLAT VSFWVATLLH
501: EFEWLSSVNA NPPDLSEVLR LSCEMACPLV VNLRSRRKIA
Best Arabidopsis Sequence Match ( AT1G01190.2 )
(BLAST)
001: MFSLNMRTEI ESLWVFALAS KFNIYMQQHF ASLLVAIAIT WFTITIVFWS TPGGPAWGKY FFTRRFISLD YNRKYKNLIP GPRGFPLVGS MSLRSSHVAH
101: QRIASVAEMS NAKRLMAFSL GDTKVVVTCH PAVAKEILNS SVFADRPVDE TAYGLMFNRA MGFAPNGTYW RTLRRLGSNH LFNPKQIKQS EDQRRVIATQ
201: MVNAFARNPK SACAVRDLLK TASLCNMMGL VFGREYELES NNNLESECLK GLVEEGYDLL GTLNWTDHLP WLAGLDFQQI RFRCSQLVPK VNLLLSRIIH
301: EQRAATGNFL DMLLSLQGSE KLSESDMVAV LWEMIFRGTD TVAVLVEWVL ARIVMHPKVQ LTVHDELDRV VGRSRTVDES DLPSLTYLTA MIKEVLRLHP
401: PGPLLSWARL SITDTSVDGY HVPAGTTAMV NMWAIARDPH VWEDPLEFKP ERFVAKEGEA EFSVFGSDLR LAPFGSGKRV CPGKNLGLTT VSFWVATLLH
501: EFEWLPSVEA NPPDLSEVLR LSCEMACPLI VNVSSRRKIM
Arabidopsis Description
CYP78A8CYP78A8 [Source:UniProtKB/TrEMBL;Acc:A0A178WIC4]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.