Factsheet for PGSC0003DMT400035609

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
endoplasmic reticulum 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g047680.2.1	Tomato	endoplasmic reticulum, golgi	93.15	76.84
PGSC0003DMT400000685	Potato	cytosol	73.52	73.52
PGSC0003DMT400014094	Potato	cytosol	38.58	71.01
CDY71495	Canola	mitochondrion	57.53	64.12
OQU75572	Sorghum	mitochondrion	37.9	62.41
VIT_15s0048g02900.t01	Wine grape	endoplasmic reticulum, plasma membrane	70.78	58.16
VIT_02s0025g02570.t01	Wine grape	endoplasmic reticulum, golgi	69.18	57.6
KRG97225	Soybean	endoplasmic reticulum, golgi, plastid	66.89	56.02
KRH06409	Soybean	extracellular, plasma membrane	67.35	55.04
Bra039267.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	66.21	55.03
CDY61720	Canola	endoplasmic reticulum, plasma membrane	66.21	55.03
Bra004517.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	66.21	54.92
CDX80036	Canola	endoplasmic reticulum, plasma membrane, plastid	66.21	54.92
CDX71698	Canola	endoplasmic reticulum, golgi	66.67	54.89
CDY27309	Canola	endoplasmic reticulum, golgi	65.98	54.84
CDY41546	Canola	endoplasmic reticulum, plasma membrane	65.98	54.73
CDY57871	Canola	endoplasmic reticulum, golgi	66.44	54.6
Bra007636.1-P	Field mustard	endoplasmic reticulum, golgi	66.21	54.51
CDX89135	Canola	endoplasmic reticulum, vacuole	66.67	54.48
KRH47844	Soybean	endoplasmic reticulum, golgi, plastid	66.67	53.87
AT3G61880.2	Thale cress	endoplasmic reticulum	68.26	53.87
AT2G46660.1	Thale cress	endoplasmic reticulum, plasma membrane	65.07	53.77
Bra032624.1-P	Field mustard	endoplasmic reticulum	63.01	51.69
CDY37995	Canola	endoplasmic reticulum	63.01	51.21
CDY32439	Canola	endoplasmic reticulum	63.01	51.21
Bra033278.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	62.33	51.03
AT1G01190.2	Thale cress	endoplasmic reticulum, golgi	62.56	50.74
CDX90016	Canola	endoplasmic reticulum, golgi, plastid	62.1	50.37
CDY15193	Canola	endoplasmic reticulum, golgi, plastid	61.42	49.91
PGSC0003DMT400074847	Potato	mitochondrion	49.77	49.89
TraesCS5A01G316600.1	Wheat	endoplasmic reticulum	60.5	49.63
Zm00001d053202_P001	Maize	endoplasmic reticulum	61.42	49.54
TraesCS7B01G168800.1	Wheat	plastid	62.1	49.28
OQU80753	Sorghum	endoplasmic reticulum	60.96	48.99
TraesCS5D01G322900.1	Wheat	endoplasmic reticulum	59.82	48.7
TraesCS7A01G270700.1	Wheat	endoplasmic reticulum, plasma membrane	60.96	48.63
TraesCS7D01G271100.1	Wheat	endoplasmic reticulum, plasma membrane	61.19	48.55
TraesCS5B01G317200.1	Wheat	endoplasmic reticulum	59.59	48.51
HORVU7Hr1G057100.2	Barley	endoplasmic reticulum, plasma membrane	60.73	48.45
Zm00001d032042_P001	Maize	endoplasmic reticulum	60.96	47.94
EER99230	Sorghum	endoplasmic reticulum	60.05	47.73
Os09t0528700-00	Rice	endoplasmic reticulum, plasma membrane, plastid	59.82	47.38
Os08t0547300-01	Rice	endoplasmic reticulum, plasma membrane, plastid	59.59	47.37
PGSC0003DMT400063324	Potato	endoplasmic reticulum	55.25	46.99
HORVU5Hr1G081060.2	Barley	mitochondrion	59.59	46.44
Zm00001d006193_P001	Maize	endoplasmic reticulum, plasma membrane, plastid	58.45	45.63
GSMUA_Achr2P03370_001	Banana	endoplasmic reticulum, plasma membrane, plastid	47.49	45.61
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	48.63	44.75
GSMUA_Achr11P...	Banana	plastid	52.51	43.89
Zm00001d027537_P001	Maize	endoplasmic reticulum	53.65	43.04
Os03t0134500-00	Rice	endoplasmic reticulum	53.65	42.96
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane, plastid	40.41	42.96
GSMUA_Achr1P07820_001	Banana	endoplasmic reticulum, golgi, plastid	42.01	42.89
TraesCS4D01G327400.1	Wheat	endoplasmic reticulum	53.88	42.75
HORVU4Hr1G081210.1	Barley	endoplasmic reticulum, plasma membrane	54.11	42.63
EER92912	Sorghum	endoplasmic reticulum	53.2	42.44
TraesCS5A01G502000.1	Wheat	endoplasmic reticulum	53.65	42.42
PGSC0003DMT400042702	Potato	endoplasmic reticulum, plasma membrane, plastid	51.83	41.8
PGSC0003DMT400043673	Potato	endoplasmic reticulum	49.32	40.22
TraesCS4B01G330500.1	Wheat	mitochondrion	53.88	39.33
HORVU5Hr1G057180.2	Barley	cytosol	33.1	36.9

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M1B2J4	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400013696	PGSC:PGSC0003DMG400013696	EnsemblPlants:PGSC0003DMT400035609
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF46	SUPFAM:SSF48264
UniParc:UPI00029528BA	:	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400013696]

Coordinates

chr5:+:43351038..43352901

Molecular Weight (calculated)

49759.2 Da

IEP (calculated)

5.723

GRAVY (calculated)

-0.071

Length

438 amino acids

Sequence
(BLAST)

001: MAEFFKAKRL MSFSLGETRF IVTCNHVVAK EVLNSTAFVA RPVNESAYGL MFDRAIGFAP YGVYWRTLRK IASTHMFCPK QIKASEAQRF EIAKQMVAIF
101: NGSEEGLRVR DVVKKASLNN MMCSVFGRKY SLVDYFNDET EEVSELVDEG YDILGILNWS DHLPWLAEFD PQKIKYRCER LVPKVNRLVG RIIDEHRAQP
201: SNVHRDFVDV LLSLQGVEAL SDSDMIAVLW EMIFRGSDTV AILIEWILAR MVLHPEVQSK VQEEVDKITE RSRSVIESDV TNMVYLQSVV NEVLRLHPPG
301: PLLAWARLAI EDTTVDGYHV PAGTTAMVNM WAITRSEEVW NEPLEFKPER FMNQTEPVIF SVLGSDLRLA PFGSGRRSCP GKTLGLTTVT FWVASLLQEF
401: EFGTTDGSKT VDLSEVLRLS CEMKTPLMVK VQPRNLTN

Best Arabidopsis Sequence Match ( AT3G61880.2 )
(BLAST)

001: MATKLDTSSL LLALLSKCSL LTQTNLALSL LVASLASLAL SLFFWSHPGG PAWGKYFLHR RRQTTVIPGP RGLPFVGSMS LMSNTLAHRC IAATAEKFRA
101: ERLMAFSLGE TRVIVTCNPD VAKEILNSPV FADRPVKESA YSLMFNRAIG FAPYGVYWRT LRKIASNHLF SPKQIKRSET QRSVIANQIV KCLTKQSNTK
201: GLCFARDLIK TASLNNMMCS VFGKEYELEE EHEEVSELRE LVEEGYDLLG TLNWTDHLPW LSEFDPQRIR SRCSNLVPKV NRFVNRIISD HREQTRDSPS
301: DFVDVLLSLD GPDKLSDPDI IAVLWEMIFR GTDTVAVLIE WILARMVLHP DIQSTVHNEL DQIVGRSRAV EESDVVSLVY LTAVVKEVLR LHPPGPLLSW
401: ARLAITDTII DGRRVPAGTT AMVNMWAIAH DPHVWENPLE FKPERFVAKE GEVEFSVLGS DLRLAPFGSG RRVCPGKNLG LTTVTFWTAT LLHEFEWLTP
501: SDEKTVDLSE KLRLSCEMAN PLAAKLRPRR SFSQKNKIKN KESKGNKKKE SYKKY

Arabidopsis Description

CYP78A9Cytochrome p450 78a9 [Source:UniProtKB/TrEMBL;Acc:F4IX02]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.