Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73053 | Canola | extracellular, plasma membrane | 89.01 | 90.19 |
| Bra015934.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 88.08 | 89.25 |
| CDX96516 | Canola | endoplasmic reticulum, plasma membrane | 88.08 | 89.25 |
| CDY49134 | Canola | endoplasmic reticulum, golgi, plasma membrane | 84.36 | 85.15 |
| Bra008134.1-P | Field mustard | endoplasmic reticulum, golgi | 84.17 | 84.96 |
| CDY42443 | Canola | endoplasmic reticulum, plasma membrane | 71.32 | 82.9 |
| VIT_17s0000g05110.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 66.67 | 68.19 |
| PGSC0003DMT400063324 | Potato | endoplasmic reticulum | 65.18 | 67.96 |
| Solyc03g114940.2.1 | Tomato | endoplasmic reticulum | 64.99 | 67.64 |
| KRH56779 | Soybean | endoplasmic reticulum, plasma membrane | 63.5 | 64.46 |
| KRH03164 | Soybean | extracellular, plasma membrane | 63.31 | 64.39 |
| GSMUA_Achr6P34990_001 | Banana | endoplasmic reticulum, plasma membrane | 47.86 | 61.34 |
| GSMUA_Achr5P08920_001 | Banana | endoplasmic reticulum, plasma membrane | 41.9 | 61.14 |
| AT1G13710.1 | Thale cress | endoplasmic reticulum | 58.47 | 60.73 |
| GSMUA_Achr9P26720_001 | Banana | endoplasmic reticulum, plasma membrane | 46.37 | 60.14 |
| GSMUA_Achr1P04470_001 | Banana | extracellular, plasma membrane | 40.6 | 59.56 |
| GSMUA_Achr6P30750_001 | Banana | mitochondrion | 20.67 | 58.73 |
| Zm00001d029526_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 53.63 | 55.92 |
| Os03t0603100-00 | Rice | plasma membrane | 21.97 | 55.66 |
| KXG39130 | Sorghum | endoplasmic reticulum | 53.63 | 55.49 |
| TraesCS2D01G183000.1 | Wheat | endoplasmic reticulum, plasma membrane | 52.7 | 55.06 |
| TraesCS2B01G201900.1 | Wheat | endoplasmic reticulum, plasma membrane | 52.7 | 54.74 |
| Os03t0417700-01 | Rice | endoplasmic reticulum | 52.33 | 54.56 |
| EER97498 | Sorghum | endoplasmic reticulum, plasma membrane | 52.51 | 54.55 |
| TraesCS2A01G175700.1 | Wheat | endoplasmic reticulum, plasma membrane | 52.51 | 54.44 |
| Zm00001d022075_P001 | Maize | endoplasmic reticulum | 52.51 | 54.23 |
| Os07t0603700-01 | Rice | plasma membrane, plastid | 51.96 | 53.14 |
| HORVU2Hr1G032890.2 | Barley | endoplasmic reticulum, plasma membrane | 53.07 | 52.29 |
| AT2G46660.1 | Thale cress | endoplasmic reticulum, plasma membrane | 48.23 | 48.87 |
| GSMUA_AchrUn_... | Banana | plasma membrane, vacuole | 24.21 | 48.33 |
| Zm00001d047279_P001 | Maize | mitochondrion | 33.71 | 48.01 |
| AT3G61880.2 | Thale cress | endoplasmic reticulum | 49.53 | 47.93 |
| AT5G09970.1 | Thale cress | endoplasmic reticulum | 46.55 | 46.64 |
| AT1G01190.2 | Thale cress | endoplasmic reticulum, golgi | 46.37 | 46.11 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EntrezGene:843751 | ProteinID:AAG52514.1 | ProteinID:AEE35551.1 | ArrayExpress:AT1G74110 |
| EnsemblPlantsGene:AT1G74110 | RefSeq:AT1G74110 | TAIR:AT1G74110 | RefSeq:AT1G74110-TAIR-G | EnsemblPlants:AT1G74110.1 | TAIR:AT1G74110.1 |
| Unigene:At.52504 | Symbol:CYP78A10 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf |
| EMBL:DQ446426 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0016705 | GO:GO:0016709 | GO:GO:0019748 | GO:GO:0020037 | GO:GO:0044550 |
| GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036396 | RefSeq:NP_177551.1 | PFAM:PF00067 | PRINTS:PR00385 |
| PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF50 | UniProt:Q9C9D1 | SUPFAM:SSF48264 |
| TMHMM:TMhelix | UniParc:UPI000009E992 | SEG:seg | : | : | : |
Description
CYP78A10Cytochrome P450 family protein [Source:UniProtKB/TrEMBL;Acc:Q9C9D1]
Coordinates
chr1:-:27866667..27868368
Molecular Weight (calculated)
60186.8 Da
IEP (calculated)
7.837
GRAVY (calculated)
-0.065
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIDMYLSFA SRSGSSPFPS LELCLSIFLF ISLFVFWLTP GGFAWALYKA RFHTRPESKT GPAIPGPSGL PIFGLLLAFV NNALTHRILA NIADTCKAKA
101: LMAFSVGSTR FVITSEPETA KELLNSSAFA DRPVKESAYE LLFDRAMGFA PFGDYWRELR RISSTHLFSP KRIFSSGESR RKIGQNMVGE IKNAMECYGE
201: VHIKKILHFG SLNNVMSSVF GKTYNFNEGI VYSKESNELE HLVSEGYELL GIFNWSDHFP GMRWLDLQGV RRRCRSLVGR VNVFVGKIIN DHKSKRSLRD
301: NPEESTYDDD FVDVLLGMHG NSKLSDSDMI AVLWEMIFRG TDTVAILLEW ILARMVLHPD IQAKAQAEID CIVGDSGRQV TDSDLPKLPY VRAIVKETLR
401: MHPPGPLLSW ARLSIHDTQI GTHFIPAGTT AMVNMWAITH DEKVWPEAHE YKPERFLGAQ ESNNFPIMGS DLRLAPFGAG RRVCPGKSMG LATVELWLAQ
501: LLGSYKWVSC GEVDLSETLK LSLEMKNTLV CKAIPRG
101: LMAFSVGSTR FVITSEPETA KELLNSSAFA DRPVKESAYE LLFDRAMGFA PFGDYWRELR RISSTHLFSP KRIFSSGESR RKIGQNMVGE IKNAMECYGE
201: VHIKKILHFG SLNNVMSSVF GKTYNFNEGI VYSKESNELE HLVSEGYELL GIFNWSDHFP GMRWLDLQGV RRRCRSLVGR VNVFVGKIIN DHKSKRSLRD
301: NPEESTYDDD FVDVLLGMHG NSKLSDSDMI AVLWEMIFRG TDTVAILLEW ILARMVLHPD IQAKAQAEID CIVGDSGRQV TDSDLPKLPY VRAIVKETLR
401: MHPPGPLLSW ARLSIHDTQI GTHFIPAGTT AMVNMWAITH DEKVWPEAHE YKPERFLGAQ ESNNFPIMGS DLRLAPFGAG RRVCPGKSMG LATVELWLAQ
501: LLGSYKWVSC GEVDLSETLK LSLEMKNTLV CKAIPRG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.