Factsheet for Solyc12g056810.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
nucleus 1
endoplasmic reticulum 5
extracellular 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043673	Potato	endoplasmic reticulum	93.66	93.48
VIT_18s0001g00590.t01	Wine grape	endoplasmic reticulum, plasma membrane	69.78	69.26
GSMUA_AchrUn_...	Banana	cytosol	25.93	62.9
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	47.2	59.39
Zm00001d033020_P001	Maize	endoplasmic reticulum	56.53	55.29
EER91649	Sorghum	endoplasmic reticulum, plasma membrane	56.9	55.25
KRG91754	Soybean	peroxisome	33.02	54.29
Os10t0403000-01	Rice	endoplasmic reticulum, plasma membrane	55.41	53.51
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	34.33	53.03
Solyc10g009310.2.1	Tomato	endoplasmic reticulum, plasma membrane	47.76	48.76
Solyc03g114940.2.1	Tomato	endoplasmic reticulum	46.08	47.87
Solyc01g096280.1.1	Tomato	endoplasmic reticulum, golgi	47.39	47.21
Solyc05g015350.2.1	Tomato	golgi, plasma membrane	44.4	46.48
Solyc05g047680.2.1	Tomato	endoplasmic reticulum, golgi	45.34	45.76

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550
GO:GO:0046872	GO:GO:0055114	GO:GO:0090709	InterPro:IPR036396	UniProt:K4DG12	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF66	SUPFAM:SSF48264
EnsemblPlantsGene:Solyc12g056810.1	EnsemblPlants:Solyc12g056810.1.1	TMHMM:TMhelix	UniParc:UPI000276A1D4	:	:

Description

No Description!

Coordinates

chr12:+:62889657..62891392

Molecular Weight (calculated)

60713.7 Da

IEP (calculated)

7.499

GRAVY (calculated)

-0.052

Length

536 amino acids

Sequence
(BLAST)

001: MSFTSIYEDF TWWMFTLPPI LETQNFFTLL IPTFIVFMVI TIFTWAFTPG GPAWKNGLNS MGRVSIPGPK GLPFFGSLFS LSHGLAHRTL AFTASAYGAT
101: QVMAFSLGST RAIVSSDPTI AREILTSPHF ANRPVKESAK QLMFSRAIGF APNGTYWRLL RKIASSHLFA PKQILAHESE RQVECNSMLV SIAKEQNMHG
201: LVTLRKHLQF ASLNNIMGIV FGKKYEMFED NKEAKELQEI VNEGFELLGA FNWSDHLSWL NYFYDPYTLK ERCAVLVPRV ESFVKKIIQD HKNGNSKKIL
301: EPHCDFVDVL LALNGEEKLH EDDMVAILWE MIFRGTDTTT LLTEWVMAEL VLNQDIQEKI HNELKTIVGK NENARDAHIS KLPYLQAVIK ETLRLHPPGP
401: LLSWARLSTS DVHLSNGMII PSNTTAMINM WSITHDPNVW DNPSTFKPER FLKYSGGMDF DVRGNDLRLA PFGAGRRVCP GKNLGLVTVS LWVAKLVQQF
501: MWVESETHPI DLSEVLKLSC EMKYPLSAKA VPRILD

Best Arabidopsis Sequence Match ( AT5G09970.1 )
(BLAST)

001: MELMNLASKE TSYWMIALPA GFGSQNLHDV STLGYLFLAV VFLSIVTWAL AGGGGVAWKN GRNRLGRVAI PGPRGIPVFG SLFTLSRGLA HRTLAAMAWS
101: RANTEIMAFS LGSTPVIVAS EPNIAREILM SPHFADRPVK QSAKSLMFSR AIGFAPNGTY WRMLRRIAST HLFAPRRILA HEAGRQLDCA EMVKAVSVEQ
201: NGAGSVVLRK HLQLAALNNI MGSVFGRRYD PLAQKEDLDE LTSMVREGFE LLGAFNWSDY LPWLGYFYDS IRLNQRCSDL VPRIRTLVKK IIDEHRVSNS
301: EKKRDIGDFV DVLLSLDGDE KLQEDDMIAV LWEMIFRGTD TTALLTEWTM AELVLNPNVQ TKLRDEILTA VGDGADGDVA DADLAKLPYL NAVVKETLRL
401: HPPGPLLSWA RLSTSDVQLS NGMVIPKGTT AMVNMWAITH DQTVWSDPLK FDPERFTGNA DMDIRGGDLR LAPFGAGRRV CPGKNMGLAT VTRWVAELVR
501: RFEWGQDQTE PVDLGEVLKL SCEMEHPLRA VVTEIF

Arabidopsis Description

CYP78A7Cytochrome P450 78A7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIB0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.