Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- plastid 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g010180.2.1 | Tomato | plastid | 15.65 | 4.05 |
| Solyc10g081650.1.1 | Tomato | plastid | 10.2 | 2.44 |
Protein Annotations
| EnsemblPlants:Solyc07g021640.1.1 | EnsemblPlantsGene:Solyc07g021640.1 | Gene3D:3.50.50.60 | InterPro:FAD/NAD-bd_sf | InterPro:IPR036188 | PANTHER:PTHR10668 |
| PANTHER:PTHR10668:SF84 | PFAM:PF13450 | SEG:seg | SUPFAM:SSF51905 | UniParc:UPI000276C9E6 | UniProt:K4CD20 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:20533871..20536856
Molecular Weight (calculated)
16332.6 Da
IEP (calculated)
4.838
GRAVY (calculated)
0.262
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRYGQDVLV LESHDVAGGA AHSFDVKGYK FDSGSSLFSG FQSRGPQANP LVLDALGELI PCVNYDSWMV YVPEGSREVC RTRFSERVEG EVNDLQLLQL
101: RLQLQVCSFL SVIVISFSLI PHFISFDSSC PATLFCSILI DRRFGCV
101: RLQLQVCSFL SVIVISFSLI PHFISFDSSC PATLFCSILI DRRFGCV
001: MAANFCGLTL QSPFLYNFSR PTIRSSSFIR SSSSSSASSN GNLKEPFSGE PEADVVVIGS GIGGLCCGAL LARYDQDVIV LESHDHPGGA AHSFEIKGYK
101: FDSGPSLFSG LQSRGPQANP LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA ILPLSSAAMA LPPLSIRGDL
201: GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE
301: ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH
401: HIVVNDWDRG VDADQNVVLI SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL GLGFKREKCE VSLVGTPLTH
501: QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL
101: FDSGPSLFSG LQSRGPQANP LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA ILPLSSAAMA LPPLSIRGDL
201: GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE
301: ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH
401: HIVVNDWDRG VDADQNVVLI SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL GLGFKREKCE VSLVGTPLTH
501: QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL
Arabidopsis Description
FAD/NAD(P)-binding oxidoreductase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.