Factsheet for Solyc05g010180.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064585	Potato	plastid	91.9	92.88
HORVU5Hr1G037300.2	Barley	cytosol	10.56	85.71
HORVU5Hr1G047900.5	Barley	cytosol, mitochondrion, plastid	19.89	81.88
GSMUA_Achr8P08430_001	Banana	peroxisome	75.88	81.32
AT1G57770.1	Thale cress	plastid	81.16	80.31
VIT_12s0035g01080.t01	Wine grape	plastid	80.46	80.18
CDX95296	Canola	plastid	80.81	79.55
Bra027908.1-P	Field mustard	plastid	80.99	78.63
CDY39935	Canola	plastid	80.81	78.46
KRH51300	Soybean	mitochondrion, plastid	76.23	77.6
HORVU5Hr1G119790.1	Barley	plastid	74.82	74.96
TraesCS5D01G528500.1	Wheat	plastid	74.65	72.85
TraesCS5B01G529400.1	Wheat	plastid	74.82	72.65
TraesCS1A01G407600.1	Wheat	plastid	74.65	72.48
TraesCSU01G062000.1	Wheat	plastid	74.65	72.48
KRH01865	Soybean	plastid	25.7	71.92
EER90543	Sorghum	mitochondrion, plastid	74.65	71.38
Zm00001d012868_P001	Maize	plastid	74.82	70.36
Os03t0841900-00	Rice	plasma membrane	75.53	66.51
Solyc10g081650.1.1	Tomato	plastid	29.23	26.99
Solyc07g021640.1.1	Tomato	peroxisome, plasma membrane, plastid	4.05	15.65

Protein Annotations

EnsemblPlants:Solyc05g010180.2.1	EnsemblPlantsGene:Solyc05g010180.2	Gene3D:3.50.50.60	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188	PANTHER:PTHR10668	PANTHER:PTHR10668:SF84	PFAM:PF01593
SEG:seg	SUPFAM:SSF51905	UniParc:UPI0002766E3B	UniProt:K4BXJ1	MapMan:35.1	:

Description

No Description!

Coordinates

chr5:-:4377503..4382261

Molecular Weight (calculated)

61294.8 Da

IEP (calculated)

7.583

GRAVY (calculated)

-0.003

Length

568 amino acids

Sequence
(BLAST)

001: MALRLLPFSP FFNFSSSNRK RRFSMRSEVS TSATLPSKQS VSGEPEADIV VIGSGIGGLC CAGLLARYGQ DVLVLESHDV AGGAAHSFDV KGYKFDSGPS
101: LFSGFQSRGP QANPLAQVLD ALGESIPCVN YDSWMVYVPE GEFLSRIGPT EFFKDLEKYA GPDSVREWRK LLDAILPISA AAMALPPLSI RGDLGVLSTA
201: AARYAPSLLK SFAQMGPQGA LGATKLLRPF SDIIDSLGIK DPFIRNWLDL LAFLLAGVKT NGILSAEMVY MFSEWYKPGC TLEYPLHGSG AIVEALVRGL
301: QKFGGRISLK SHVENIVVEK GRAVGVKLRG GQFVRARKAV VSNASMWDTL SLLPPEAVPK SYQDGIKTTQ QCESFMHLHL GFDAEGISDD LGIHHIVVND
401: WDRGVDADQN VVLISVPSVL SPDLAPPGKH VLHAYTPGTE PFEIWEGLDR RSNEYKNLKA ERSEVMWKAV EKALGPGFNR DKCEVKLVGT PLTHQRFLRR
501: NRGTYGPAIL AGKGTFPGHS TPIPQLMCCG DSTFPGIGVP AVAASGAIVA NSLVSVSEHS RLLDAIGI

Best Arabidopsis Sequence Match ( AT1G57770.1 )
(BLAST)

001: MAANFCGLTL QSPFLYNFSR PTIRSSSFIR SSSSSSASSN GNLKEPFSGE PEADVVVIGS GIGGLCCGAL LARYDQDVIV LESHDHPGGA AHSFEIKGYK
101: FDSGPSLFSG LQSRGPQANP LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA ILPLSSAAMA LPPLSIRGDL
201: GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE
301: ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH
401: HIVVNDWDRG VDADQNVVLI SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL GLGFKREKCE VSLVGTPLTH
501: QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL

Arabidopsis Description

FAD/NAD(P)-binding oxidoreductase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.