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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027908.1-P Field mustard plastid 94.28 92.99
CDY39935 Canola plastid 94.11 92.82
AT1G57770.1 Thale cress plastid 90.29 90.77
HORVU5Hr1G037300.2 Barley cytosol 9.88 81.43
Solyc05g010180.2.1 Tomato plastid 79.55 80.81
PGSC0003DMT400064585 Potato plastid 78.68 80.78
GSMUA_Achr8P08430_001 Banana peroxisome 73.83 80.38
KRH51300 Soybean mitochondrion, plastid 75.56 78.14
VIT_12s0035g01080.t01 Wine grape plastid 76.95 77.89
HORVU5Hr1G047900.5 Barley cytosol, mitochondrion, plastid 18.02 75.36
HORVU5Hr1G119790.1 Barley plastid 73.31 74.6
TraesCS5D01G528500.1 Wheat plastid 73.14 72.51
TraesCSU01G062000.1 Wheat plastid 73.31 72.31
TraesCS5B01G529400.1 Wheat plastid 73.31 72.31
TraesCS1A01G407600.1 Wheat plastid 73.14 72.14
EER90543 Sorghum mitochondrion, plastid 73.31 71.21
KRH01865 Soybean plastid 24.96 70.94
Zm00001d012868_P001 Maize plastid 73.83 70.53
Os03t0841900-00 Rice plasma membrane 74.7 66.82
CDY06229 Canola plastid 27.21 26.66
CDY09954 Canola plastid 27.21 26.61
Protein Annotations
EnsemblPlants:CDX95296EnsemblPlantsGene:GSBRNA2T00100950001Gene3D:3.50.50.60GO:A0A078E1M5GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114InterPro:Amino_oxidaseInterPro:FAD/NAD-bd_sf
InterPro:IPR036188PANTHER:PTHR10668PANTHER:PTHR10668:SF84PFAM:PF01593ProteinID:CDX95296ProteinID:CDX95296.1
SEG:segSUPFAM:SSF51905UniParc:UPI0004EB669BMapMan:35.1::
Description
BnaC09g15740D
Coordinates
chrLK031887:-:1360879..1364101
Molecular Weight (calculated)
62119.9 Da
IEP (calculated)
7.112
GRAVY (calculated)
0.008
Length
577 amino acids
Sequence
(BLAST)
001: MAATFCSWTL QPPFLSNFRR PTVRSRFIRA SSSSSTSSNG NLPIKKSFPG EPEADVVVIG SGIGGLCCGA LLARYNQDVL VLESHDLPGG AAHSFEIKGY
101: KFDSGPSLFS GLQSRGPQAN PLAQVLDALG ESLPCAKYDS WMVYLPEGDF LSRIGPTDFF KDLEKYAGTN AVQEWEKLLG AILPLSSAAM ALPPLSIRGD
201: LGVLSTAAAR YAPSLLKSFI KMGPQGALGA TKLLRPFLEI VDSLELKDPF IRNWIDLLAF LLAGVKSDGI LSAEMIYMFA EWYKPGCTLE YPIDGSGAVV
301: EALVRGLEKF GGRLSLKSHV ENIVIENGKA VGVKLRNGQF VRARKAVVSN ASMWDTLKLL PPGALPDSYV SGVNTTPQCE SFMHLHLGFD AKEQGIADDL
401: EIHHIVVNDW DRGVDADQNV VLISVPSVLS PNLAPPGKHV LHAYMPGTEP FSLWEGLDRK SAEYKDLKSQ RSEVMWKAVE RALGPGFKRE KCEVSLVGTP
501: LTHQRFLRRN RGTYGPAIEA GKGTFPGHSA PIPQLMCCGD STFPGIGVPA VAASGAIVAN SLVTVSKHSE LLDAIGL
Best Arabidopsis Sequence Match ( AT1G57770.1 )
(BLAST)
001: MAANFCGLTL QSPFLYNFSR PTIRSSSFIR SSSSSSASSN GNLKEPFSGE PEADVVVIGS GIGGLCCGAL LARYDQDVIV LESHDHPGGA AHSFEIKGYK
101: FDSGPSLFSG LQSRGPQANP LAQVLDALGE SFPCKKYDSW MVYLPEGDFL SRIGPTDFFK DLEKYAGPSA VQEWEKLLGA ILPLSSAAMA LPPLSIRGDL
201: GVLSTAAARY APSLLKSFIK MGPKGALGAT KLLRPFSEIV DSLELKDPFI RNWIDLLAFL LAGVKSDGIL SAEMIYMFAE WYKPGCTLEY PIDGTGAVVE
301: ALVRGLEKFG GRLSLKSHVE NIVIENGKAV GVKLRNGQFV RARKAVVSNA SMWDTLKLLP PGALPESYVK GVNTTPQCES FMHLHLGFDA EGIADDLEIH
401: HIVVNDWDRG VDADQNVVLI SVPSVLSPNL APPGKHVLHA YCPGTEPFGL WEGLDRRSAE YKNLKSQRSE VMWRAVERAL GLGFKREKCE VSLVGTPLTH
501: QRFLRRNRGT YGPAIEAGKG TFPGHSTPIP QLLCCGDSTF PGIGVPAVAA SGAIVANSLV PVSKHSQLLD AIGL
Arabidopsis Description
FAD/NAD(P)-binding oxidoreductase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.