CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031539.1-P	Field mustard	plastid	94.57	94.57
CDY09954	Canola	plastid	88.45	88.31
VIT_08s0032g00800.t01	Wine grape	cytosol	68.93	87.69
AT1G06820.1	Thale cress	cytosol	86.59	85.71
GSMUA_Achr8P26670_001	Banana	cytosol	73.34	81.97
EES08717	Sorghum	plastid	75.55	75.81
Os11t0572700-01	Rice	plastid	75.21	75.6
Solyc10g081650.1.1	Tomato	plastid	78.27	74.96
Zm00001d052932_P001	Maize	plastid	74.7	74.96
Zm00001d007502_P001	Maize	plastid	74.36	74.87
PGSC0003DMT400072543	Potato	cytosol	78.1	74.8
KRH72050	Soybean	plastid	75.89	73.52
KRH32922	Soybean	plastid	75.89	73.4
TraesCS1D01G074300.1	Wheat	plastid	72.5	72.74
TraesCS1B01G090300.1	Wheat	mitochondrion	73.01	72.64
HORVU1Hr1G015490.5	Barley	plastid	72.84	72.47
TraesCS1A01G071700.1	Wheat	mitochondrion	71.99	71.99
CDY39935	Canola	plastid	27.5	27.69
CDX95296	Canola	plastid	26.66	27.21

Protein Annotations

KEGG:00906+5.2.1.13	Gene3D:3.50.50.60	MapMan:9.1.6.1.7	GO:A0A078F054	InterPro:Amino_oxidase	EnsemblPlants:CDY06229
ProteinID:CDY06229	ProteinID:CDY06229.1	InterPro:CRTISO	InterPro:FAD/NAD-bd_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016117
GO:GO:0016491	GO:GO:0016853	GO:GO:0046608	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00122142001	InterPro:IPR036188
PFAM:PF01593	PANTHER:PTHR10668	PANTHER:PTHR10668:SF104	MetaCyc:PWY-6475	SUPFAM:SSF51905	TIGRFAMs:TIGR02730
UniPathway:UPA00803	UniParc:UPI0004EEF393	SEG:seg	:	:	:

Description

BnaA09g49740D

Coordinates

chrLK031968:-:373842..377344

Molecular Weight (calculated)

64625.0 Da

IEP (calculated)

7.549

GRAVY (calculated)

-0.081

Length

589 amino acids

Sequence
(BLAST)

001: MNLCLHNPVT CADRSSSLFS ALKTSNNKLG TSKFGFLKNR KKNHVVAVRS VSSTAVEERT KRESGGGESK VYDAIVIGSG IGGLVAATQL AVKEAKVLVL
101: EKYLIPGGSS GYYERDGYTF DVGSSVMFGF SDKGKLNLIT QALKAVGREM EVIPDPTTVH FHLPNDLSVQ VHREYDEFVN ELISKFPHEK EGILGFYGVC
201: WKIFNSLNSL ELKSLEEPIY LFGQFFQKPL ECLTLAYYLP QNAGDIARKY IKDPQLLSFI DAECFIVSTV NALQTPMINA SMVLCDRHYG GINYPVGGVG
301: GIARSLAGGL VDQGSEILYK ANVKSIILDD GKAVGVRLAD GREFFAKTII SNATRWDTFG KLLKGEKLPK EEENFQKVYV KAPSFLSIHM GVKAEVLPPD
401: TDCHHFVLED DWKNLEEPYG SIFLSIPTIL DPSLAPDGRH ILHIFTTSSI EDWEGLTPKE YEAKKEEVAA GIIQRLEKKL FPGLSSSITF KEVGTPRTHR
501: RYLARDKGTY GPMPRGTPKG LLGMPFNTTA IDGLYCVGDS CFPGQGVIAV AFSGVMCAHR VAADIGLERK SKVLDAGLLG LLGWLRTLA

Best Arabidopsis Sequence Match ( AT1G06820.1 )
(BLAST)

001: MDLCFQNPVK CGDRLFSALN TSTYYKLGTS NLGFNGPVLE NRKKKKKLPR MVTVKSVSSS VVASTVQGTK RDGGESLYDA IVIGSGIGGL VAATQLAVKE
101: ARVLVLEKYL IPGGSSGFYE RDGYTFDVGS SVMFGFSDKG NLNLITQALK AVGRKMEVIP DPTTVHFHLP NNLSVRIHRE YDDFIAELTS KFPHEKEGIL
201: GFYGDCWKIF NSLNSLELKS LEEPIYLFGQ FFQKPLECLT LAYYLPQNAG AIARKYIKDP QLLSFIDAEC FIVSTVNALQ TPMINASMVL CDRHYGGINY
301: PVGGVGGIAK SLAEGLVDQG SEIQYKANVK SIILDHGKAV GVRLADGREF FAKTIISNAT RWDTFGKLLK GEKLPKEEEN FQKVYVKAPS FLSIHMGVKA
401: EVLPPDTDCH HFVLEDDWKN LEEPYGSIFL SIPTILDSSL APDGRHILHI FTTSSIEDWE GLPPKEYEAK KEDVAARIIQ RLEKKLFPGL SSSITFKEVG
501: TPRTHRRFLA RDKGTYGPMP RGTPKGLLGM PFNTTAIDGL YCVGDSCFPG QGVIAVAFSG VMCAHRVAAD IGLEKKSRVL DVGLLGLLGW LRTLA

Arabidopsis Description

CRTISOProlycopene isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.