Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g081650.1.1 | Tomato | plastid | 97.89 | 97.89 |
| VIT_08s0032g00800.t01 | Wine grape | cytosol | 65.69 | 87.26 |
| GSMUA_Achr8P26670_001 | Banana | cytosol | 71.71 | 83.68 |
| Bra031539.1-P | Field mustard | plastid | 74.96 | 78.27 |
| CDY06229 | Canola | plastid | 74.8 | 78.1 |
| AT1G06820.1 | Thale cress | cytosol | 75.45 | 77.98 |
| CDY09954 | Canola | plastid | 74.47 | 77.63 |
| Os11t0572700-01 | Rice | plastid | 72.68 | 76.28 |
| TraesCS1D01G074300.1 | Wheat | plastid | 71.54 | 74.96 |
| KRH72050 | Soybean | plastid | 73.33 | 74.18 |
| Zm00001d052932_P001 | Maize | plastid | 70.73 | 74.11 |
| KRH32922 | Soybean | plastid | 73.33 | 74.06 |
| HORVU1Hr1G015490.5 | Barley | plastid | 71.06 | 73.82 |
| EES08717 | Sorghum | plastid | 70.41 | 73.76 |
| TraesCS1A01G071700.1 | Wheat | mitochondrion | 70.57 | 73.68 |
| TraesCS1B01G090300.1 | Wheat | mitochondrion | 70.89 | 73.65 |
| Zm00001d007502_P001 | Maize | plastid | 69.76 | 73.33 |
| PGSC0003DMT400064585 | Potato | plastid | 27.15 | 29.72 |
Protein Annotations
| KEGG:00906+5.2.1.13 | EntrezGene:102591604 | Gene3D:3.50.50.60 | MapMan:9.1.6.1.7 | InterPro:Amino_oxidase | InterPro:CRTISO |
| InterPro:FAD/NAD-bd_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016117 | GO:GO:0016491 | GO:GO:0046608 | GO:GO:0055114 |
| InterPro:IPR036188 | UniProt:M1CQH9 | PFAM:PF01593 | EnsemblPlantsGene:PGSC0003DMG400028224 | PGSC:PGSC0003DMG400028224 | EnsemblPlants:PGSC0003DMT400072543 |
| PANTHER:PTHR10668 | PANTHER:PTHR10668:SF104 | SUPFAM:SSF51905 | TIGRFAMs:TIGR02730 | UniParc:UPI0002951643 | RefSeq:XP_006339185.1 |
| SEG:seg | : | : | : | : | : |
Description
Carotenoid isomerase, chloroplastic [Source:PGSC_GENE;Acc:PGSC0003DMG400028224]
Coordinates
chr10:+:56306412..56312609
Molecular Weight (calculated)
67520.2 Da
IEP (calculated)
7.315
GRAVY (calculated)
-0.094
Length
615 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTLSFMFPN SLLDGTCKIV ALGDSKTRYN KQRSSCFDPL RIGNCTDQQQ LCCLSWGVDK AKGRRGGTVS NLKAVVDVDK RVESYGSSDV EGNENGSYDA
101: IVIGSGIGGL VAATQLAVKG AKVLVLEKYV IPGGSSGFYE RDGYKFDVGS SVMFGFSDKG NLNLITQALA AVGRKLEVIP DPTTVHFHLP NDLSVRIHRE
201: YDDFIEELVS KFPHEKEGII KFYGECWKIF NSLNSLELKS LEEPIYLFGQ FFKKPLECLT LAYYLPQNAG SIARKYIKDS GLLSFIDAEC FIVSTVNALQ
301: TPMINASMVL CDRHFGGINY PVGGVGEIAK SLAKGLDDHG SQILYRANVT SIILDNGKAV GVKLSDGRKF YAKTVVSNAT RWDTFGKLLK AENLPKEEEN
401: FQKAYVKAPS FLSIHMGVKA DVLPPDTDCH HFVLEDDWTN LEKPYGSIFL SIPTVLDSSL APEGHHILHI FTTSSIEDWE GLSRKDYEAK KELVAERIIS
501: RLEKTLFPGL KSSILFKEVG TPKTHRRYLA RDSGTYGPMP RGTPKGLLGM PFNTTAIDGL YCVGDSCFPG QGVIAVAFSG VMCAHRVAAD LGFEKKSDVL
601: DSALLRLLGW LRTLA
101: IVIGSGIGGL VAATQLAVKG AKVLVLEKYV IPGGSSGFYE RDGYKFDVGS SVMFGFSDKG NLNLITQALA AVGRKLEVIP DPTTVHFHLP NDLSVRIHRE
201: YDDFIEELVS KFPHEKEGII KFYGECWKIF NSLNSLELKS LEEPIYLFGQ FFKKPLECLT LAYYLPQNAG SIARKYIKDS GLLSFIDAEC FIVSTVNALQ
301: TPMINASMVL CDRHFGGINY PVGGVGEIAK SLAKGLDDHG SQILYRANVT SIILDNGKAV GVKLSDGRKF YAKTVVSNAT RWDTFGKLLK AENLPKEEEN
401: FQKAYVKAPS FLSIHMGVKA DVLPPDTDCH HFVLEDDWTN LEKPYGSIFL SIPTVLDSSL APEGHHILHI FTTSSIEDWE GLSRKDYEAK KELVAERIIS
501: RLEKTLFPGL KSSILFKEVG TPKTHRRYLA RDSGTYGPMP RGTPKGLLGM PFNTTAIDGL YCVGDSCFPG QGVIAVAFSG VMCAHRVAAD LGFEKKSDVL
601: DSALLRLLGW LRTLA
001: MDLCFQNPVK CGDRLFSALN TSTYYKLGTS NLGFNGPVLE NRKKKKKLPR MVTVKSVSSS VVASTVQGTK RDGGESLYDA IVIGSGIGGL VAATQLAVKE
101: ARVLVLEKYL IPGGSSGFYE RDGYTFDVGS SVMFGFSDKG NLNLITQALK AVGRKMEVIP DPTTVHFHLP NNLSVRIHRE YDDFIAELTS KFPHEKEGIL
201: GFYGDCWKIF NSLNSLELKS LEEPIYLFGQ FFQKPLECLT LAYYLPQNAG AIARKYIKDP QLLSFIDAEC FIVSTVNALQ TPMINASMVL CDRHYGGINY
301: PVGGVGGIAK SLAEGLVDQG SEIQYKANVK SIILDHGKAV GVRLADGREF FAKTIISNAT RWDTFGKLLK GEKLPKEEEN FQKVYVKAPS FLSIHMGVKA
401: EVLPPDTDCH HFVLEDDWKN LEEPYGSIFL SIPTILDSSL APDGRHILHI FTTSSIEDWE GLPPKEYEAK KEDVAARIIQ RLEKKLFPGL SSSITFKEVG
501: TPRTHRRFLA RDKGTYGPMP RGTPKGLLGM PFNTTAIDGL YCVGDSCFPG QGVIAVAFSG VMCAHRVAAD IGLEKKSRVL DVGLLGLLGW LRTLA
101: ARVLVLEKYL IPGGSSGFYE RDGYTFDVGS SVMFGFSDKG NLNLITQALK AVGRKMEVIP DPTTVHFHLP NNLSVRIHRE YDDFIAELTS KFPHEKEGIL
201: GFYGDCWKIF NSLNSLELKS LEEPIYLFGQ FFQKPLECLT LAYYLPQNAG AIARKYIKDP QLLSFIDAEC FIVSTVNALQ TPMINASMVL CDRHYGGINY
301: PVGGVGGIAK SLAEGLVDQG SEIQYKANVK SIILDHGKAV GVRLADGREF FAKTIISNAT RWDTFGKLLK GEKLPKEEEN FQKVYVKAPS FLSIHMGVKA
401: EVLPPDTDCH HFVLEDDWKN LEEPYGSIFL SIPTILDSSL APDGRHILHI FTTSSIEDWE GLPPKEYEAK KEDVAARIIQ RLEKKLFPGL SSSITFKEVG
501: TPRTHRRFLA RDKGTYGPMP RGTPKGLLGM PFNTTAIDGL YCVGDSCFPG QGVIAVAFSG VMCAHRVAAD IGLEKKSRVL DVGLLGLLGW LRTLA
Arabidopsis Description
CRTISOProlycopene isomerase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Y8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.